Splice junction sequence |
TGACCAACAGCACCAGATGCAGCTGACACATAAACTGTCTCTCCTTCCTTTGGAGAACAAACTT CATAAAACCCAGCATAGGCAGTCATACCAGGCATACcgagaagtccagtatagtaggataatgg aacatctgtatgttggatcttgaaatgcatgtgagccattggtgtaataacactatactcctcc catccaac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 855 Transcript exons: 5583071-5583253,5583628-5583863,5585188-5585363,5585548- 5585681,5585779-5585904 CGAGAAGTCCAGTATAGTAGGATAATGGAACATCTGTATGTTGGATCTTGAAATGCATGTGAGC CATTGGTGTAATAACACTATACTCCTCCCATCCAACTATTCCCCAGAGTAAATCACCTTTCTTG TAATCTGGATGCCCAGATTCTATCACTCTAGACACTCCATACCCATAGATTGGCTCTTGCCGGG AGCGTAAGCTTGAGCAAGAGCAGAGGAGGGATCAGGTTTCCCCATGCGAGACCGCATATAAGGA TCGCATGACAGGTAGAGATTCTTCACAAGAACCGATTTAGAACCTTCCGGAACCCTAAGTTCGA CGGTGGTGGTGGTGAAATTGAAATCGGATTCCTTAGGGAAACCACTCACGTGGTCTTTGAATAT GACCTGCTTGTTCGTCGTCATCGTTGTTATTCTCCCTTTTGTAGATTATGTTGGATAGGTTGTG TACACCTTCTTGGTTTTCAAGATTGTACTGTGAGATCATTCCACACACAGCGATACGTCCGTGT GGGTTCATGTTTAATAGCACTGCGTCTAGCATTTTGCCTCCTACGTTTTCAAAGTATATGTCAA TGCCTGTAGGGAAACACCTCCTAACAGTTAAAGACATCAAGCGCTTAGAAATAAGTAGTTCACT GAACCTTTTGAGGGCAGCACTAAGGTCTGGTTCTTCCTTGTAGTTAAATGCATCATCAAACCCA AACTTGGTCTTCAGAAGATCAACCTGTACTTCCGGCGCTTCCAACAACATAACAGCCCATCATC TTAGCAAATTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGTCTCTC CTTCCTTTGGAGAACAAACTTCA
Transcript length: 887 Transcript exons: 5583071-5583253,5583628-5583807,5585148-5585363,5585526- 5585681,5585770-5585921 CGAGAAGTCCAGTATAGTAGGATAATGGAACATCTGTATGTTGGATCTTGAAATGCATGTGAGC CATTGGTGTAATAACACTATACTCCTCCCATCCAACTATTCCCCAGAGTAAATCACCTTTCTTG TAATCTGGATGCCCAGATTCTATCACTCTAGACACTCCATACCCATAGATTGGCTCTTGCCGGG AGCGTAAGCTTGAGCAAGAGCAGAGGAGGGATCAGGTTTCCCCATGCGAGACCGCATATAAGGA TCGCATGACAGGTAGAGATTCTTCACAAGAACCGATTTAGAACCTTCCGGAACCCTAAGTTCGA CGGTGGTGGTGGTGAAATTGAAATCGGATTCCTTAGGGAAACCCTCGTAGAAATCAAACACTGC AAAGCCTTGAATGCGGATTCTTTTGTAGATTATGTTGGATAGGTTGTGTACACCTTCTTGGTTT TCAAGATTGTACTGTGAGATCATTCCACACACAGCGATACGTCCGTGTGGGTTCATGTTTAATA GCACTGCGTCTAGCATTTTGCCTCCTACGTTTTCAAAGTATATGTCAATGCCTGTAGGGAAACA CCTCCGCTTTCTTATGTAAACCGATCCTAACAGTTAAAGACATCAAGCGCTTAGAAATAAGTAG TTCACTGAACCTTTTGAGGGCAGCACTAAGGTCTGGTTCTTCCTTGTAGTTAAATGCATCATCA AACCCAAACTTGGTCTTCAGAAGATCAACCTACCTTCTCTGTACTTCCGGCGCTTCCAACAACA TAACAGCCCATCATCTTAGCAAATTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACA CATAAACTGTCTCTCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGC
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Genomic sequence |
CGAGAAGTCCAGTATAGTAGGATAATGGAACATCTGTATGTTGGATCTTGAAATGCATGTGAGC CATTGGTGTAATAACACTATACTCCTCCCATCCAACTATTCCCCAGAGTAAATCACCTTTCTTG TAATCTGGATGCCCAGATTCTATCACTCTAGACACTCCATACCCATAGATTGGCTGCACCAAAA ACACACAATGCAACAACAACAGTCAACACGAGAGAAAGCAAAAAACACAAAGAGACAAAATTTA TTGTCAGAGTCTTCTTCAAGAACCCCAATCTGAAGTTTTTATACCATTGTCATCTAGTTTATAT AAATAAGAAGCATCCTGATTAATTTAAGTACAGAAATAATCCAACATTAAACTAGAACAGTTGA TCCGTTTGTTATATAATAAGACATCATTCTGGTCACAAAGTATAATTTATTATATCTCAACATA TAAAACCAAACCAAACAAAACAAAACAAAACAAAACATTTTCATCCGATTTGAATTTCACCGGA GATCTTCCTAATCGGAGATTAAAAGTAGATCCTCGTCGTTCATACCTTGCCGGGAGCGTAAGCT TGAGCAAGAGCAGAGGAGGGATCAGGTTTCCCCATGCGAGACCGCATATAAGGATCGCATGACA GGTAGAGATTCTTCACAAGAACCGATTTAGAACCTTCCGGAACCCTAAGTTCGACGGTGGTGGT GGTGAAATTGAAATCGGATTCCTTAGGGAAACCACTCACGTGGTCTTTGAATATGACCTGCTTG TTCGTCGTCATCGTTGTTATTCTCCGATTCAACTTCTGATTTCCACCAATTTGTTACTTCTTCT TCTTCTTCTTCGAGGACGCGCCTGCTTTTTATAGTGGCCTCTCACTCGTAATATCAAGTATGAA GTCACTGCTCATGATGATTCATCACAATATGTTCACAATTTTTAAACTCTTTCGAGCGTTTTTA TTGTTGACACTTTCACATTTTGTGATATATTTTCATTTCCTTTCACATTTCATTTTCTTTCCAA TTCTCTCTTCTGTCACATTTTCACAAGAGTTGGTGTTTATACATTACTGATATAGGAAAAGGAT GGTGATAAATGAGTGACACGTGGACGGTGGTAATTGAAGATTAAAAGCAACGGTCAATATTAAG AACAGAAGAATGAGGTCAATAAGAAGCTGAAGACACTTCATTATGCTAAAATCTGAGATTGTAT CTTCTTCTTCATTTTGTTCTCTGTTACTACTTGAGAATTCTCTGTAATTCTCAAGCTATTCCTC ATCGTTTACCGGAGCTTCTCTCTTGAGACTCTTGTAGATGAGAAGTTGATGTTGCGTTTCATGA ACGTCGTATCAAATTATCAATCTATATCTTTCGAATCCATTTTCCTCTTTATTATCTGATTTAC GTTATCAATTACAAAAGAACACACCTCATCGTTTTAGAGACATTTGGCTTCAATTTCCTCAAGT GTCAAGTGTGGTCCCTTTGTCTCTGGAACATCGAAGATTCTTAAGACCAGAGACAAAACACATA TCACACCAAACCCACAAAACAGTATCCCAGCTCCAAATAGTTCTCGCAAAACAGAGCCATGTGA TTGTTAATCGTGATGTCCTCTAATAAAGAAGAAAAGGAGTTGCACAAATAGCAACACTAACTTA ATTACATTTTTGAATTTGTGAGAGGGGTTTGAGATTGTTTGTTACTACCTTGATACATTTGAAT TTGATAAACAAGTCACACAGAAAATGATTCAAAACCATAACGAACGAACAAATTGATACATATT AAAAAATTACTTGAATTACTAGTAATCTAGTATTTATAAACCAAAACCTCAGGCTTGGATTCGA ACACCCATACAAAATCTTTTGGATACATACAACATTACTCCCATAGATATATATATTCACTCAC GAGCAATAACAACAACTTGTTTTCCAACGTTCTTACCATGGAAGAGTCCCACAAGAGCTTCAGG ACCTTTCTCAAGCCCATCAGCTACATCTTCCACGTACGTGATCTTCCCTTCTTTAATGTGCGGA AGCACAAAATCCAAGAACTTTGAGTATTTCTCGTAGAAATCAAACACTGCAAAGCCTTGAATGC GGATTCTTTTGTAGATTATGTTGGATAGGTTGTGTACACCTTCTTGGTTTTCAAGATTGTACTG TGAGATCATTCCACACACAGCGATACGTCCGTGTGGGTTCATGTTTAATAGCACTGCGTCTAGC ATTTTGCCTCCTACGTTTTCAAAGTATATGTCAATGCCTGTAGGGAAACACCTGCAAAAGATAA AGGAGAGAGAATGTCTCTTAGATTAGTCAAACAGCAGTTGATAAACCTTAGATTACTCATTGGT TTGACCAGCCTGTTGTCAAGGCCGGCTCTGGATCATGGTGTTCATGCTTTGATCAATTTCTTTT GTTTCTACTTTAGTTGTGAATTGCCGCTTTCTTATGTAAACCGATCCTAACAGTTAAAGACATC AAGCGCTTAGAAATAAGTAGTTCACTGAACCTTTTGAGGGCAGCACTAAGGTCTGGTTCTTCCT TGTAGTTAAATGCATCATCAAACCCAAACTTGGTCTTCAGAAGATCAACCTAGCAAATCCCGAA AAAGGAAGTAATTGGGCAAGTCATTCTCCTGAAGGAAAACCAAGAAATAAAAGGATACAAATTG TCCATCATCTCACCTTCTCTGTACTTCCGGCGCTTCCAACAACATAACAGCCCATCATCTTAGC AAATTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGTCTCTCCTTCC TTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACCAGGCATAC |