Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os05g0341300_circ_g.2 |
ID in PlantcircBase | osa_circ_027473 |
Alias | NA |
Organism | Oryza sativa |
Position | chr5: 16007835-16007959 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os05g0341300 |
Parent gene annotation |
Similar to guanine nucleotide-binding protein alpha-1 subunit. ( Os05t0341300-01) |
Parent gene strand | - |
Alternative splicing | Os05g0333150_circ_ag.1 Os05g0333200_circ_g.1 Os05g0333200_circ_ag.1 Os05g0333500_circ_ag.1 Os05g0333500_circ_ag.2 Os05g0333500_circ_ag.3 Os05g0334000_circ_ag.1 Os05g0335100_circ_g.1 Os05g0335401_circ_g.1 Os05g0335401_circ_g.2 Os05g0335401_circ_g.3 Os05g0335401_circ_g.4 Os05g0336000_circ_g.1 Os05g0339000_circ_g.1 Os05g0339000_circ_g.2 Os05g0339000_circ_g.3 Os05g0341300_circ_g.1 Os05g0341300_circ_g.3 Os05g0341300_circ_g.4 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CA-AT |
Number of exons covered | Os05t0341300-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.123333333 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |