Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023689_circ_g.3 |
ID in PlantcircBase | zma_circ_003112 |
Alias | circ1463 |
Organism | Zea mays |
Position | chr10: 15556754-15565068 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d023689 |
Parent gene annotation |
SGF29 tudor-like domain |
Parent gene strand | + |
Alternative splicing | Zm00001d023689_circ_g.2 Zm00001d023689_circ_g.4 Zm00001d023689_circ_g.5 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d023689_T003:2 Zm00001d023689_T001:3 Zm00001d023689_T006:3 Zm00001d023689_T002:3 Zm00001d023689_T004:3 |
Conservation Information | |
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Conserved circRNAs | osi_circ_010424 osa_circ_011168 osi_circ_003397 |
PMCS | 0.014216269 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |