Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d023689_circ_g.2 |
ID in PlantcircBase | zma_circ_003111 |
Alias | circ311 |
Organism | Zea mays |
Position | chr10: 15556754-15557491 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d023689 |
Parent gene annotation |
SGF29 tudor-like domain |
Parent gene strand | + |
Alternative splicing | Zm00001d023689_circ_g.3 Zm00001d023689_circ_g.4 Zm00001d023689_circ_g.5 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d023689_T001:2 Zm00001d023689_T002:2 Zm00001d023689_T003:1 Zm00001d023689_T004:2 Zm00001d023689_T006:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.106759598 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |