Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0645100_circ_g.5 |
ID in PlantcircBase | osa_circ_041885 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 32836762-32836853 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | CIRI-long |
Parent gene | Os04g0645100 |
Parent gene annotation |
Tetratricopeptide repeat (TPR) domain containing protein, Grain size and starch quality (Os04t0645100-01);Similar to H0811D08.1 protein. (Os04t0645100-02) |
Parent gene strand | + |
Alternative splicing | Os04g0645100_circ_g.2 Os04g0645100_circ_g.3 Os04g0645100_circ_g.4 Os04g0645100_circ_g.6 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os04t0645100-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.213771377 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |