| CircRNA Name |
AT2G31810_circ_g.1 |
| ID in PlantcircBase |
ath_circ_015949 |
| Alias |
At_ciR5864 |
| Organism |
Arabidpsis thaliana |
| Position |
chr2: 13524596-13524809 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, find_circ, CIRI-full |
| Parent gene |
AT2G31810 |
| Parent gene annotation |
Acetolactate synthase small subunit 2, chloroplastic
|
| Parent gene strand |
+ |
| Alternative splicing |
AT2G31810_circ_g.2 AT2G31810_circ_g.3 AT2G31810_circ_g.4 AT2G31810_circ_g.5 AT2G31810_circ_g.6 AT2G31810_circ_g.7 AT2G31810_circ_g.8 AT2G31810_circ_g.9 AT2G31810_circ_g.10 AT2G31810_circ_g.11 AT2G31810_circ_g.12 AT2G31810_circ_g.13 AT2G31810_circ_g.14 AT2G31810_circ_g.15 AT2G31810_circ_g.16 AT2G31810_circ_g.17 AT2G31810_circ_g.18 AT2G31810_circ_g.19 AT2G31810_circ_g.20 AT2G31810_circ_g.21 AT2G31810_circ_g.22 |
| Support reads |
2/10 |
| Tissues |
leaf/root, leaf, aerial, whole_plant |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT2G31810.3:1
AT2G31810.1:1
AT2G31810.2:1
|
