Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os12g0129300_circ_g.1 |
ID in PlantcircBase | osa_circ_010417 |
Alias | Os_ciR7321 |
Organism | Oryza sativa |
Position | chr12: 1398243-1398678 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | find_circ |
Parent gene | Os12g0129300 |
Parent gene annotation |
Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II . (Os12t0129300-01) |
Parent gene strand | + |
Alternative splicing | Os12g0128700_circ_g.1 Os12g0128700_circ_g.2 Os12g0128700_circ_g.3 Os12g0128700_circ_igg.1 Os12g0128700_circ_g.2 Os12g0128700_circ_ag.1 Os12g0128700_circ_g.2 Os12g0128700_circ_g.3 Os12g0128700_circ_g.4 Os12g0128800_circ_g.1 Os12g0128800_circ_g.2 Os12g0129000_circ_g.1 Os12g0129000_circ_g.2 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.111429511 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |