Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os12g0128700_circ_g.3 |
ID in PlantcircBase | osa_circ_010411 |
Alias | NA |
Organism | Oryza sativa |
Position | chr12: 1363821-1364489 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os12g0128700 |
Parent gene annotation |
Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II . (Os12t0128700-01) |
Parent gene strand | + |
Alternative splicing | Os12g0128700_circ_g.1 Os12g0128700_circ_g.2 Os12g0128700_circ_g.3 Os12g0128700_circ_igg.1 Os12g0128700_circ_g.2 Os12g0128700_circ_ag.1 Os12g0128700_circ_g.2 Os12g0128700_circ_g.4 Os12g0128800_circ_g.1 Os12g0128800_circ_g.2 Os12g0129000_circ_g.1 Os12g0129000_circ_g.2 Os12g0129300_circ_g.1 |
Support reads | 4 |
Tissues | shoot, root |
Exon boundary | No-No |
Splicing signals | GT-CG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.330098742 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |