Splice junction sequence |
GACTGTAGGAAGCCCCTTCAGCAAATGTCACTGGCTTCTCAGGTATGTTGTAGGTAGGGGAATC AAATGGATCTTCAACAGTTTTCAGGTCTTTTGTACCctccacatgttcaacaccgtcctcatct gtccaaaccttgttaggaatgcgctgccgagctgcacgatttctactttcattgccatatccag taacagga
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 1269 Transcript exons: 8113245-8113364,8113453-8114601 CTCCACATGTTCAACACCGTCCTCATCTGTCCAAACCTTGTTAGGAATGCGCTGCCGAGCTGCA CGATTTCTACTTTCATTGCCATATCCAGTAACAGGATACCCAATTTTTGCTGTAACCTGACTGT CATTCTGTACTCTTGCTAGCGCTTTTCCAAAAATCTTGTACCTGTAGAATGGTAACAGCAGTGC AAGCTCTTTCAAATTGCATATAATAATATATGCATTTAACATAAGAAAAAGATTCGAAGCACAA AAAGAACTTTCACTAGGAAGTAACAAGAACACCCATGCCAACTTGCTAAGTGACTTGCATAGGA TCAAATCAGAAATGTGCCATGGCACTCTGCTGCAGCATACAAGAAAAAAAATCCATAGCTTACT GATTGTTTCTTTAAAGTTTGGCACCGTAAGTGGCTACATGTGAGGGTCATAAACAAACCTAGAA ACATCTGGATTAATAAATGTGTGTGTGATATTAGTTTTTTAAAAAATAAATAAAAAGGAACTAT TTCCATATTATACAAAATATTAACGCTACAATGTGAAGAAAGACCATTGCACAGTGCATATTTG TAGGACTTACCAAATTATCATAACTGGTTAGACTTGAATGTATTTTACTGTCATAAGCCATACA ATTATGCGAGCAACTATATTATTAAAGTACCTTTGATTTCATTCAAAATGGAGGCTTCCTGAGG AACTGGTTCATCGTGGAATCTTAAGCCATGTGAAAAATAGGAGAGGCAGGGGTTGGATAAAAAC TGAAATGGAAGAAAGTGGTAAAAAGACCACTGAAGGCATGGAGTGCATCCAAAGATTTGGGTTT GGATAGGAGTACGAGGAAGTTGGCGATCCAACATCCAAGTGCCAGAACTACATAAGAATTTACA TAATTCTTTCACCGGTATCATTCCTAGTAGTATTAGGAATATGTGGAAGTTAGAGATCCAACAT TTTGGTTCTCCTGGCTATACTTGGGTTTCACCTCTAGTCCACCCAGCTTCCTGGGACTAAAGAT TGTAGTACTTGTTGTTGAGCTAAGTGCCTAAGTCAAAAGAATTAACAATTAATGCAGAAAACTT ACTCTTTTGGTTCAAATATAAGTTCTTTGAAAACAGCATATCCAGCCACTGCTGCAATTCCAAG TCCCGCAACTATTACAAGACTGTAGGAAGCCCCTTCAGCAAATGTCACTGGCTTCTCAGGTATG TTGTAGGTAGGGGAATCAAATGGATCTTCAACAGTTTTCAGGTCTTTTGTACC
Transcript length: 348 Transcript exons: 8113245-8113364,8113453-8113501,8114423-8114601 CTCCACATGTTCAACACCGTCCTCATCTGTCCAAACCTTGTTAGGAATGCGCTGCCGAGCTGCA CGATTTCTACTTTCATTGCCATATCCAGTAACAGGATACCCAATTTTTGCTGTAACCTGACTGT CATTCTGTACTCTTGCTAGCGCTTTTCCAAAAATCTTGTACTCTTTTGGTTCAAATATAAGTTC TTTGAAAACAGCATATCCAGCCACTGCTGCAATTCCAAGTCCCGCAACTATTACAAGACTGTAG GAAGCCCCTTCAGCAAATGTCACTGGCTTCTCAGGTATGTTGTAGGTAGGGGAATCAAATGGAT CTTCAACAGTTTTCAGGTCTTTTGTACC
|
Genomic sequence |
CTCCACATGTTCAACACCGTCCTCATCTGTCCAAACCTTGTTAGGAATGCGCTGCCGAGCTGCA CGATTTCTACTTTCATTGCCATATCCAGTAACAGGATACCCAATTTTTGCTGTAACCTGACAAA ACGTGTGAAAACATGAAGTTGTACCAAGGGGAAAATATGATATGTATGAAGGAAGTGGAATAGC ACTAATGTCCACAAACCTGACTGTCATTCTGTACTCTTGCTAGCGCTTTTCCAAAAATCTTGTA CCTGTAGAATGGTAACAGCAGTGCAAGCTCTTTCAAATTGCATATAATAATATATGCATTTAAC ATAAGAAAAAGATTCGAAGCACAAAAAGAACTTTCACTAGGAAGTAACAAGAACACCCATGCCA ACTTGCTAAGTGACTTGCATAGGATCAAATCAGAAATGTGCCATGGCACTCTGCTGCAGCATAC AAGAAAAAAAATCCATAGCTTACTGATTGTTTCTTTAAAGTTTGGCACCGTAAGTGGCTACATG TGAGGGTCATAAACAAACCTAGAAACATCTGGATTAATAAATGTGTGTGTGATATTAGTTTTTT AAAAAATAAATAAAAAGGAACTATTTCCATATTATACAAAATATTAACGCTACAATGTGAAGAA AGACCATTGCACAGTGCATATTTGTAGGACTTACCAAATTATCATAACTGGTTAGACTTGAATG TATTTTACTGTCATAAGCCATACAATTATGCGAGCAACTATATTATTAAAGTACCTTTGATTTC ATTCAAAATGGAGGCTTCCTGAGGAACTGGTTCATCGTGGAATCTTAAGCCATGTGAAAAATAG GAGAGGCAGGGGTTGGATAAAAACTGAAATGGAAGAAAGTGGTAAAAAGACCACTGAAGGCATG GAGTGCATCCAAAGATTTGGGTTTGGATAGGAGTACGAGGAAGTTGGCGATCCAACATCCAAGT GCCAGAACTACATAAGAATTTACATAATTCTTTCACCGGTATCATTCCTAGTAGTATTAGGAAT ATGTGGAAGTTAGAGATCCAACATTTTGGTTCTCCTGGCTATACTTGGGTTTCACCTCTAGTCC ACCCAGCTTCCTGGGACTAAAGATTGTAGTACTTGTTGTTGAGCTAAGTGCCTAAGTCAAAAGA ATTAACAATTAATGCAGAAAACTTACTCTTTTGGTTCAAATATAAGTTCTTTGAAAACAGCATA TCCAGCCACTGCTGCAATTCCAAGTCCCGCAACTATTACAAGACTGTAGGAAGCCCCTTCAGCA AATGTCACTGGCTTCTCAGGTATGTTGTAGGTAGGGGAATCAAATGGATCTTCAACAGTTTTCA GGTCTTTTGTACC |