Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0253800_circ_g.1 |
ID in PlantcircBase | osa_circ_018897 |
Alias | Os_ciR9179 |
Organism | Oryza sativa |
Position | chr3: 8112358-8115861 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Os03g0253800 |
Parent gene annotation |
Mitochondrial import inner membrane translocase, subunit Tim21 d omain containing protein. (Os03t0253800-01);Conserved hypothetic al protein. (Os03t0253800-02);Mitochondrial inner membrane trans locase complex, subunit Tim21 domain containing protein. (Os03t0 253800-03) |
Parent gene strand | - |
Alternative splicing | Os03g0253800_circ_g.2 Os03g0253800_circ_g.3 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os03t0253800-03:5 Os03t0253800-02:4 Os03t0253800-01:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.318326175 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |