Plant Circular RNA Database

Detail information of Os08g0162100_circ_g.14

			
						 General Information
					
						CircRNA Name
						Os08g0162100_circ_g.14
					
						ID in PlantcircBase
						osa_circ_036012
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 3670802-3674258  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0162100						
					
						Parent gene annotation
						
							Transcriptional co-repressor, Regulation of meristem fate (Os08t
0162100-01);Similar to predicted protein. (Os08t0162100-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os08g0162100_circ_g.2 Os08g0162100_circ_g.3 Os08g0162100_circ_g.4 Os08g0162100_circ_g.5 Os08g0162100_circ_g.6 Os08g0162100_circ_g.7 Os08g0162100_circ_g.8 Os08g0162100_circ_g.9 Os08g0162100_circ_g.10 Os08g0162100_circ_g.11 Os08g0162100_circ_g.12 Os08g0162100_circ_g.13 Os08g0162100_circ_g.15 Os08g0162100_circ_g.16 Os08g0162100_circ_g.17 Os08g0162100_circ_g.18 Os08g0162100_circ_g.19 Os08g0162100_circ_g.20 Os08g0162100_circ_g.21 Os08g0162100_circ_g.22 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0162100-01:11
Os08t0162100-02:6

General Information
CircRNA Name	Os08g0162100_circ_g.14
ID in PlantcircBase	osa_circ_036012
Alias	NA
Organism	Oryza sativa
Position	chr8: 3670802-3674258 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0162100
Parent gene annotation	Transcriptional co-repressor, Regulation of meristem fate (Os08t 0162100-01);Similar to predicted protein. (Os08t0162100-02)
Parent gene strand	+
Alternative splicing	Os08g0162100_circ_g.2 Os08g0162100_circ_g.3 Os08g0162100_circ_g.4 Os08g0162100_circ_g.5 Os08g0162100_circ_g.6 Os08g0162100_circ_g.7 Os08g0162100_circ_g.8 Os08g0162100_circ_g.9 Os08g0162100_circ_g.10 Os08g0162100_circ_g.11 Os08g0162100_circ_g.12 Os08g0162100_circ_g.13 Os08g0162100_circ_g.15 Os08g0162100_circ_g.16 Os08g0162100_circ_g.17 Os08g0162100_circ_g.18 Os08g0162100_circ_g.19 Os08g0162100_circ_g.20 Os08g0162100_circ_g.21 Os08g0162100_circ_g.22
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0162100-01:11 Os08t0162100-02:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATAGGTTAAAAGCAAGCTTAAGGGACATTCAAAAAAGATCACTGGGCTGGCATTTTCGCAGTCA
ATGAATATGCTTGTATCTTCAGGTGCTGATGCTCAGattgatgcccacattggtggggttaatg
atattgccttctctcaccccaacaagaccctctcaattattacttgtggtgatgataaactaat
taaggtga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1497
Transcript exons: 3670802-3670897,3671026-3671121,3671385-3671512,3671766-
3672000,3672087-3672254,3672618-3672725,3672812-3672961,
3673249-3673359,3673462-3673641,3673771-3673899,3674163-
3674258
ATTGATGCCCACATTGGTGGGGTTAATGATATTGCCTTCTCTCACCCCAACAAGACCCTCTCAA
TTATTACTTGTGGTGATGATAAACTAATTAAGGTATGGGATGCTCAGACAGGACAAAAGCAGTA
CACATTTGAAGGTCACGAAGCTCCAGTATATTCTGTTTGCCCTCACTACAAGGAGTCAATTCAG
TTTATATTCTCTACTGCCATCGATGGGAAAATTAAGGCATGGTTATATGACTGTTTGGGCTCAA
GGGTTGACTATGATGCTCCTGGACATTGGTGTACTACCATGGCTTACAGTGCTGATGGAACAAG
GCTCTTCTCATGTGGTACTAGCAAAGATGGTGATTCACACTTGGTTGAGTGGAATGAGACTGAG
GGAGCTATTAAGAGGACATACAATGGTTTCAGGAAGCGCTCACTGGGTGTTGTCCAGTTTGATA
CAACAAGAAACCGCTTCTTGGCTGCTGGAGATGAATTCGTTGTTAAATTCTGGGATATGGATAA
CACCAACATACTTACAACAACAGATTGTGACGGTGGACTGCCTGCGAGCCCACGCTTGAGATTC
AACAGAGAAGGTTCATTGCTTGCTGTTACAGCAAATGAAAATGGAATAAAAATATTAGCCAACA
CTGATGGACAGCGTTTGCTAAGGATGCTAGAGAGCAGAGCATATGAGGGCTCTCGAGGGCCACC
TCAACAAATTAATACCAAGCCCCCAATTGTCAACACCCTTGGTTCTGTTTCCAATGTGTCTAGT
CCTATGGCAGTGAATTCGGAGAGACCTGATCGGGCATTGCCCACAGTGTCAATGAGTGGCCTGG
CGCCCATGGATGTTAGCAGAACCCCAGATGTTAAGCCAAGAATTACAGATGAATCTGAAAAGGT
TAAAACCTGGAAGTTGGCAGACATTGGTGACTCAGGACATCTCCGAGCACTGCGTATGCCGGAT
ACATCAGCAACTTCAAGCAAAGTTGTGCGTCTGCTGTATACAAATAATGGGGTTGCGCTTTTGG
CTCTTGGCTCTAATGCTGTTCATAAGCTGTGGAAATGGCAACGCACTGATAGGAATCCTAATGG
CAAGTCCACTGCATCTTTCACTCCTCAAATGTGGCAACCAGCAAATGGGATTCTTATGGCAAAT
GACACTAGTGATGGCAACCCCGAAGAAGCAACTGCCTGCATTGCTCTGTCCAAAAATGATTCCT
ATGTGATGTCTGCATCCGGTGGCAAAGTCTCATTGTTCAACATGATGACATTCAAGGTCATGAC
TACTTTCATGGCACCTCCACCTGCTGCAACTTTCCTTGCATTCCACCCTCAAGACAATAATATC
ATTGCTATTGGAATGGAGGACTCTACCATTCAAATTTATAATGTCCGTGTTGACGAGGTTAAAA
GCAAGCTTAAGGGACATTCAAAAAAGATCACTGGGCTGGCATTTTCGCAGTCAATGAATATGCT
TGTATCTTCAGGTGCTGATGCTCAG
						
					

						Genomic sequence
						
							ATTGATGCCCACATTGGTGGGGTTAATGATATTGCCTTCTCTCACCCCAACAAGACCCTCTCAA
TTATTACTTGTGGTGATGATAAACTAATTAAGGTGAGGTCGTTGATATGATACACTGCTTCACC
CTTTCTTGAGAAAAAGAAATGAACACCATATTCATATGATACATTGCTTTATCCTCTTGAAAAA
ATGAACCATGGATGCACATTTGATTTTGGCAGGTATGGGATGCTCAGACAGGACAAAAGCAGTA
CACATTTGAAGGTCACGAAGCTCCAGTATATTCTGTTTGCCCTCACTACAAGGAGTCAATTCAG
GTATTTCAGGAATACTTCAATTTACTTTCTTAGGATATGCTTCTGCCGTTTTAATTTGCAATGC
GTTGTGGATCTAATCTTTCTGGTTAGTGCATTTCATTGCCATTTTCATGATAAATATGCTTATT
GCATTCTTGGTTAGCATTAGTATTGCATGTTGATTTGCTTTGATTTTGACATATGCAAAGGTAG
ACTATGTATTATCTTTTCTACTATTATCTGTTATATCCAATGCATTTCTTTAACATTCGTTTTC
TTTGCAGTTTATATTCTCTACTGCCATCGATGGGAAAATTAAGGCATGGTTATATGACTGTTTG
GGCTCAAGGGTTGACTATGATGCTCCTGGACATTGGTGTACTACCATGGCTTACAGTGCTGATG
GAACAAGGTGATGAGACACTGCAAATGAATATCAGCTGCTAATTGTTCAAGACAATAATATAGT
TTCTAAACCTTCACAAATTAAGTGAATATATTGAATAAATAGTATAGTTGTCAGGCAGGAACAA
ATTAAAATGAGAATATGTTGCAGGGTGAAGGATATACATTTTATCGTAGCTTCTCTAGTTGCAA
TTTGTTTTGTCACTCCATTTCACACTTTGTATCTGTGCGAGTTGTTTGATTGTAAATTTTCCCT
GCAGGCTCTTCTCATGTGGTACTAGCAAAGATGGTGATTCACACTTGGTTGAGTGGAATGAGAC
TGAGGGAGCTATTAAGAGGACATACAATGGTTTCAGGAAGCGCTCACTGGGTGTTGTCCAGTTT
GATACAACAAGAAACCGCTTCTTGGCTGCTGGAGATGAATTCGTTGTTAAATTCTGGGATATGG
ATAACACCAACATACTTACAACAACAGATTGTGACGGTGGACTGCCTGTTAGTATAGTTTCTCC
TAGTATCATGTTGTCGGAATCATCTACACTTAAGGTTTTGTGCTTAACCTCATGCTAATAATTT
TGCAGGCGAGCCCACGCTTGAGATTCAACAGAGAAGGTTCATTGCTTGCTGTTACAGCAAATGA
AAATGGAATAAAAATATTAGCCAACACTGATGGACAGCGTTTGCTAAGGATGCTAGAGAGCAGA
GCATATGAGGGCTCTCGAGGGCCACCTCAACAAATTAATACCAAGGTATTGATGCATATACTTA
CCATTTTTTTAATGTTCCCTTAAATCCTAGTGTCATTAGGGTATAAAGATAACATTGATTCGCG
TATTCGGAAAAAAAGATAACATTGTTTCTGTTCTCTATTATAACCTTGTTTTCTGATATATCTT
TTTTTTTGGTTCCGTCATCTGAAAACTGGTTTGGGCCTATGGCTGTTTCCTGTTTTCTGAAGCT
TCAAAACCACTAGTATCTATTCGTTTGTAAGATGCAGCACGGTGTTCTGGGCAACTGTTTAGAC
TTTAGTTAGTTTCAATCAAGCTGCCTTGTGTTATTTTCAGTGCTGGCTGATAATGTTGACTATA
ACCTCATTTTTGTTCTTATTGTAGCCCCCAATTGTCAACACCCTTGGTTCTGTTTCCAATGTGT
CTAGTCCTATGGCAGTGAATTCGGAGAGACCTGATCGGGCATTGCCCACAGTGTCAATGAGTGG
CCTGGTGAGTTTGCAGAATCTATTTTGTTGTCTGCTCACTGTTCAATACTTCAACCTGTTCTGT
TGCTAAATGCATCAAACAAATACCAGGCGCCCATGGATGTTAGCAGAACCCCAGATGTTAAGCC
AAGAATTACAGATGAATCTGAAAAGGTTAAAACCTGGAAGTTGGCAGACATTGGTGACTCAGGA
CATCTCCGAGCACTGCGTATGCCGGATACATCAGCAACTTCAAGCAAAGTATGTTGAACAATGT
GTGCTTGGTTGCTATCAAGTCTGTTGAGTTATAAATATTGATCATGCAATAATAACCTGATTAC
CTTAAACATATGAGCTTGTCTTTCTGTTTAATGTCTGGAAGACCGCAGTATCTGTTGGTGTTTA
CATGCAATTGTTGCACAAATGTCAAGTTTTGACCTTTTTTTGTCAACATTTGATAGGATCTTTT
TTCAGTGATAGAACAGGCTGTTCAGTTCTGAGCAATATGAAATTTCTGATAAGCACTGTAATTT
TTTTTTGTTGCACAGGTTGTGCGTCTGCTGTATACAAATAATGGGGTTGCGCTTTTGGCTCTTG
GCTCTAATGCTGTTCATAAGCTGTGGAAATGGCAACGCACTGATAGGAATCCTAATGGCAAGGT
TAGAGTGGAGAGTTGTTCTTATTTGGATTTCATCTGTTCTTATTTGGATTTCATCTGCTATTCT
GTTTGCTTGGTTTCTAAATATATGCATATATTGTAGTCCACTGCATCTTTCACTCCTCAAATGT
GGCAACCAGCAAATGGGATTCTTATGGCAAATGACACTAGTGATGGCAACCCCGAAGAAGCAAC
TGCCTGCATTGCTCTGTCCAAAAATGATTCCTATGTGATGTCTGCATCCGGTGGCAAAGTCTCA
TTGTTCAACATGATGACATTCAAGGTATATGATCTCTTCGGTGTGTAGCACAATCAATTGTTAT
TACCCTAGAGCATAGGTCATGAGTTACTTTCCATAAAAATATGTGTTATTCTATAGTTGTGACG
TTAAAATTTTTGAATTTTTTCACAGGTCATGACTACTTTCATGGCACCTCCACCTGCTGCAACT
TTCCTTGCATTCCACCCTCAAGACAATAATATCATTGCTATTGGAATGGAGGACTCTACCATTC
AAATTTATAATGTCCGTGTTGACGAGGTGAGTGATATTCTCTTAATGGTTCTCACCGCAAGTGA
TTAAACTAGTCAAATAATGTTTCTCATTTCCTCTTACCAGATGAATCAGATCTTGTGAGATTTT
GTAGATGACGTTTTAGATATATGTATTTTTTTTTTTACTTATAAACCTTATGTGCAATAGAAAT
GCTCAGTGACCTTCAACTAACTGAAGATTAAAATTTAAACAGCTGAGAACTTGTTTCAGTGATA
ATTGATTCCTTCTGTCTTAACCATATGGCATAGGTTAAAAGCAAGCTTAAGGGACATTCAAAAA
AGATCACTGGGCTGGCATTTTCGCAGTCAATGAATATGCTTGTATCTTCAGGTGCTGATGCTCA
G
						
					

			
		

Sequences
Splice junction sequence	ATAGGTTAAAAGCAAGCTTAAGGGACATTCAAAAAAGATCACTGGGCTGGCATTTTCGCAGTCA ATGAATATGCTTGTATCTTCAGGTGCTGATGCTCAGattgatgcccacattggtggggttaatg atattgccttctctcaccccaacaagaccctctcaattattacttgtggtgatgataaactaat taaggtga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1497 Transcript exons: 3670802-3670897,3671026-3671121,3671385-3671512,3671766- 3672000,3672087-3672254,3672618-3672725,3672812-3672961, 3673249-3673359,3673462-3673641,3673771-3673899,3674163- 3674258 ATTGATGCCCACATTGGTGGGGTTAATGATATTGCCTTCTCTCACCCCAACAAGACCCTCTCAA TTATTACTTGTGGTGATGATAAACTAATTAAGGTATGGGATGCTCAGACAGGACAAAAGCAGTA CACATTTGAAGGTCACGAAGCTCCAGTATATTCTGTTTGCCCTCACTACAAGGAGTCAATTCAG TTTATATTCTCTACTGCCATCGATGGGAAAATTAAGGCATGGTTATATGACTGTTTGGGCTCAA GGGTTGACTATGATGCTCCTGGACATTGGTGTACTACCATGGCTTACAGTGCTGATGGAACAAG GCTCTTCTCATGTGGTACTAGCAAAGATGGTGATTCACACTTGGTTGAGTGGAATGAGACTGAG GGAGCTATTAAGAGGACATACAATGGTTTCAGGAAGCGCTCACTGGGTGTTGTCCAGTTTGATA CAACAAGAAACCGCTTCTTGGCTGCTGGAGATGAATTCGTTGTTAAATTCTGGGATATGGATAA CACCAACATACTTACAACAACAGATTGTGACGGTGGACTGCCTGCGAGCCCACGCTTGAGATTC AACAGAGAAGGTTCATTGCTTGCTGTTACAGCAAATGAAAATGGAATAAAAATATTAGCCAACA CTGATGGACAGCGTTTGCTAAGGATGCTAGAGAGCAGAGCATATGAGGGCTCTCGAGGGCCACC TCAACAAATTAATACCAAGCCCCCAATTGTCAACACCCTTGGTTCTGTTTCCAATGTGTCTAGT CCTATGGCAGTGAATTCGGAGAGACCTGATCGGGCATTGCCCACAGTGTCAATGAGTGGCCTGG CGCCCATGGATGTTAGCAGAACCCCAGATGTTAAGCCAAGAATTACAGATGAATCTGAAAAGGT TAAAACCTGGAAGTTGGCAGACATTGGTGACTCAGGACATCTCCGAGCACTGCGTATGCCGGAT ACATCAGCAACTTCAAGCAAAGTTGTGCGTCTGCTGTATACAAATAATGGGGTTGCGCTTTTGG CTCTTGGCTCTAATGCTGTTCATAAGCTGTGGAAATGGCAACGCACTGATAGGAATCCTAATGG CAAGTCCACTGCATCTTTCACTCCTCAAATGTGGCAACCAGCAAATGGGATTCTTATGGCAAAT GACACTAGTGATGGCAACCCCGAAGAAGCAACTGCCTGCATTGCTCTGTCCAAAAATGATTCCT ATGTGATGTCTGCATCCGGTGGCAAAGTCTCATTGTTCAACATGATGACATTCAAGGTCATGAC TACTTTCATGGCACCTCCACCTGCTGCAACTTTCCTTGCATTCCACCCTCAAGACAATAATATC ATTGCTATTGGAATGGAGGACTCTACCATTCAAATTTATAATGTCCGTGTTGACGAGGTTAAAA GCAAGCTTAAGGGACATTCAAAAAAGATCACTGGGCTGGCATTTTCGCAGTCAATGAATATGCT TGTATCTTCAGGTGCTGATGCTCAG
Genomic sequence	ATTGATGCCCACATTGGTGGGGTTAATGATATTGCCTTCTCTCACCCCAACAAGACCCTCTCAA TTATTACTTGTGGTGATGATAAACTAATTAAGGTGAGGTCGTTGATATGATACACTGCTTCACC CTTTCTTGAGAAAAAGAAATGAACACCATATTCATATGATACATTGCTTTATCCTCTTGAAAAA ATGAACCATGGATGCACATTTGATTTTGGCAGGTATGGGATGCTCAGACAGGACAAAAGCAGTA CACATTTGAAGGTCACGAAGCTCCAGTATATTCTGTTTGCCCTCACTACAAGGAGTCAATTCAG GTATTTCAGGAATACTTCAATTTACTTTCTTAGGATATGCTTCTGCCGTTTTAATTTGCAATGC GTTGTGGATCTAATCTTTCTGGTTAGTGCATTTCATTGCCATTTTCATGATAAATATGCTTATT GCATTCTTGGTTAGCATTAGTATTGCATGTTGATTTGCTTTGATTTTGACATATGCAAAGGTAG ACTATGTATTATCTTTTCTACTATTATCTGTTATATCCAATGCATTTCTTTAACATTCGTTTTC TTTGCAGTTTATATTCTCTACTGCCATCGATGGGAAAATTAAGGCATGGTTATATGACTGTTTG GGCTCAAGGGTTGACTATGATGCTCCTGGACATTGGTGTACTACCATGGCTTACAGTGCTGATG GAACAAGGTGATGAGACACTGCAAATGAATATCAGCTGCTAATTGTTCAAGACAATAATATAGT TTCTAAACCTTCACAAATTAAGTGAATATATTGAATAAATAGTATAGTTGTCAGGCAGGAACAA ATTAAAATGAGAATATGTTGCAGGGTGAAGGATATACATTTTATCGTAGCTTCTCTAGTTGCAA TTTGTTTTGTCACTCCATTTCACACTTTGTATCTGTGCGAGTTGTTTGATTGTAAATTTTCCCT GCAGGCTCTTCTCATGTGGTACTAGCAAAGATGGTGATTCACACTTGGTTGAGTGGAATGAGAC TGAGGGAGCTATTAAGAGGACATACAATGGTTTCAGGAAGCGCTCACTGGGTGTTGTCCAGTTT GATACAACAAGAAACCGCTTCTTGGCTGCTGGAGATGAATTCGTTGTTAAATTCTGGGATATGG ATAACACCAACATACTTACAACAACAGATTGTGACGGTGGACTGCCTGTTAGTATAGTTTCTCC TAGTATCATGTTGTCGGAATCATCTACACTTAAGGTTTTGTGCTTAACCTCATGCTAATAATTT TGCAGGCGAGCCCACGCTTGAGATTCAACAGAGAAGGTTCATTGCTTGCTGTTACAGCAAATGA AAATGGAATAAAAATATTAGCCAACACTGATGGACAGCGTTTGCTAAGGATGCTAGAGAGCAGA GCATATGAGGGCTCTCGAGGGCCACCTCAACAAATTAATACCAAGGTATTGATGCATATACTTA CCATTTTTTTAATGTTCCCTTAAATCCTAGTGTCATTAGGGTATAAAGATAACATTGATTCGCG TATTCGGAAAAAAAGATAACATTGTTTCTGTTCTCTATTATAACCTTGTTTTCTGATATATCTT TTTTTTTGGTTCCGTCATCTGAAAACTGGTTTGGGCCTATGGCTGTTTCCTGTTTTCTGAAGCT TCAAAACCACTAGTATCTATTCGTTTGTAAGATGCAGCACGGTGTTCTGGGCAACTGTTTAGAC TTTAGTTAGTTTCAATCAAGCTGCCTTGTGTTATTTTCAGTGCTGGCTGATAATGTTGACTATA ACCTCATTTTTGTTCTTATTGTAGCCCCCAATTGTCAACACCCTTGGTTCTGTTTCCAATGTGT CTAGTCCTATGGCAGTGAATTCGGAGAGACCTGATCGGGCATTGCCCACAGTGTCAATGAGTGG CCTGGTGAGTTTGCAGAATCTATTTTGTTGTCTGCTCACTGTTCAATACTTCAACCTGTTCTGT TGCTAAATGCATCAAACAAATACCAGGCGCCCATGGATGTTAGCAGAACCCCAGATGTTAAGCC AAGAATTACAGATGAATCTGAAAAGGTTAAAACCTGGAAGTTGGCAGACATTGGTGACTCAGGA CATCTCCGAGCACTGCGTATGCCGGATACATCAGCAACTTCAAGCAAAGTATGTTGAACAATGT GTGCTTGGTTGCTATCAAGTCTGTTGAGTTATAAATATTGATCATGCAATAATAACCTGATTAC CTTAAACATATGAGCTTGTCTTTCTGTTTAATGTCTGGAAGACCGCAGTATCTGTTGGTGTTTA CATGCAATTGTTGCACAAATGTCAAGTTTTGACCTTTTTTTGTCAACATTTGATAGGATCTTTT TTCAGTGATAGAACAGGCTGTTCAGTTCTGAGCAATATGAAATTTCTGATAAGCACTGTAATTT TTTTTTGTTGCACAGGTTGTGCGTCTGCTGTATACAAATAATGGGGTTGCGCTTTTGGCTCTTG GCTCTAATGCTGTTCATAAGCTGTGGAAATGGCAACGCACTGATAGGAATCCTAATGGCAAGGT TAGAGTGGAGAGTTGTTCTTATTTGGATTTCATCTGTTCTTATTTGGATTTCATCTGCTATTCT GTTTGCTTGGTTTCTAAATATATGCATATATTGTAGTCCACTGCATCTTTCACTCCTCAAATGT GGCAACCAGCAAATGGGATTCTTATGGCAAATGACACTAGTGATGGCAACCCCGAAGAAGCAAC TGCCTGCATTGCTCTGTCCAAAAATGATTCCTATGTGATGTCTGCATCCGGTGGCAAAGTCTCA TTGTTCAACATGATGACATTCAAGGTATATGATCTCTTCGGTGTGTAGCACAATCAATTGTTAT TACCCTAGAGCATAGGTCATGAGTTACTTTCCATAAAAATATGTGTTATTCTATAGTTGTGACG TTAAAATTTTTGAATTTTTTCACAGGTCATGACTACTTTCATGGCACCTCCACCTGCTGCAACT TTCCTTGCATTCCACCCTCAAGACAATAATATCATTGCTATTGGAATGGAGGACTCTACCATTC AAATTTATAATGTCCGTGTTGACGAGGTGAGTGATATTCTCTTAATGGTTCTCACCGCAAGTGA TTAAACTAGTCAAATAATGTTTCTCATTTCCTCTTACCAGATGAATCAGATCTTGTGAGATTTT GTAGATGACGTTTTAGATATATGTATTTTTTTTTTTACTTATAAACCTTATGTGCAATAGAAAT GCTCAGTGACCTTCAACTAACTGAAGATTAAAATTTAAACAGCTGAGAACTTGTTTCAGTGATA ATTGATTCCTTCTGTCTTAACCATATGGCATAGGTTAAAAGCAAGCTTAAGGGACATTCAAAAA AGATCACTGGGCTGGCATTTTCGCAGTCAATGAATATGCTTGTATCTTCAGGTGCTGATGCTCA G

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.238518824

Conservation Information
Conserved circRNAs	NA
PMCS	0.238518824

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							3671488-3674255(+)
3674252-3670889(+)
						
					

						Potential amino acid sequence
						
							MAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEF
VVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESR
AYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKP
RITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKW
QRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLF
NMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGL
AFSQSMNMLVSSGADAQIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEG
HEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSC
GTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNIL
TTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQIN
TKPPIVNTLGSVSNVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWK
LADIGDSGHLRALRMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTA
SFTPQMWQPANGILMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMA
PPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSG
ADAQIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYK
ESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEW
NETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASP
RLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVS
NVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRAL
RMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGI
LMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQ
DNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQIDAHIGGVN
DIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDG
KIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNG
FRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAV
TANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERP
DRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVV
RLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEE
ATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDST
IQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQ(+)
MLRLMPTLVGLMILPSLTPTRPSQLLLVVMIN*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	3671488-3674255(+) 3674252-3670889(+)
Potential amino acid sequence	MAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEF VVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESR AYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKP RITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKW QRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLF NMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGL AFSQSMNMLVSSGADAQIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEG HEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSC GTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNIL TTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQIN TKPPIVNTLGSVSNVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWK LADIGDSGHLRALRMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTA SFTPQMWQPANGILMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMA PPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSG ADAQIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYK ESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEW NETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASP RLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVS NVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRAL RMPDTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGI LMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQ DNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQIDAHIGGVN DIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDG KIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNG FRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAV TANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERP DRALPTVSMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVV RLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEE ATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDST IQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQ(+) MLRLMPTLVGLMILPSLTPTRPSQLLLVVMIN*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0162100_circ_g.14

Address

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