Plant Circular RNA Database

Detail information of Os02g0452500_circ_g.13

			
						 General Information
					
						CircRNA Name
						Os02g0452500_circ_g.13
					
						ID in PlantcircBase
						osa_circ_014582
					
						Alias
						Os02circ12308/Os_ciR275
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 14950803-14952508  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, circseq_cup, find_circ
					
						Parent gene
						
							Os02g0452500						
					
						Parent gene annotation
						
							Similar to SNARE-interacting protein KEULE. (Os02t0452500-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os02g0452500_circ_g.1 Os02g0452500_circ_g.2 Os02g0452500_circ_g.3 Os02g0452500_circ_g.4 Os02g0452500_circ_g.5 Os02g0452500_circ_g.6 Os02g0452500_circ_g.7 Os02g0452500_circ_g.8 Os02g0452500_circ_g.9 Os02g0452500_circ_g.10 Os02g0452500_circ_g.11 Os02g0452500_circ_g.12 Os02g0452500_circ_g.14 Os02g0452500_circ_g.15 Os02g0452500_circ_g.16 Os02g0452500_circ_g.17 Os02g0452500_circ_g.18 Os02g0452500_circ_g.19 Os02g0452500_circ_g.20 Os02g0452500_circ_g.21 Os02g0452500_circ_g.22 Os02g0452500_circ_g.23 Os02g0452500_circ_g.24 Os02g0452500_circ_g.25 Os02g0452500_circ_g.26 						
					
						Support reads
						10/151/18/20
					
						Tissues
						leaf and panicle/root/root/shoot, root, seed, pistil
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0452500-01:5

General Information
CircRNA Name	Os02g0452500_circ_g.13
ID in PlantcircBase	osa_circ_014582
Alias	Os02circ12308/Os_ciR275
Organism	Oryza sativa
Position	chr2: 14950803-14952508 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, circseq_cup, find_circ
Parent gene	Os02g0452500
Parent gene annotation	Similar to SNARE-interacting protein KEULE. (Os02t0452500-01)
Parent gene strand	-
Alternative splicing	Os02g0452500_circ_g.1 Os02g0452500_circ_g.2 Os02g0452500_circ_g.3 Os02g0452500_circ_g.4 Os02g0452500_circ_g.5 Os02g0452500_circ_g.6 Os02g0452500_circ_g.7 Os02g0452500_circ_g.8 Os02g0452500_circ_g.9 Os02g0452500_circ_g.10 Os02g0452500_circ_g.11 Os02g0452500_circ_g.12 Os02g0452500_circ_g.14 Os02g0452500_circ_g.15 Os02g0452500_circ_g.16 Os02g0452500_circ_g.17 Os02g0452500_circ_g.18 Os02g0452500_circ_g.19 Os02g0452500_circ_g.20 Os02g0452500_circ_g.21 Os02g0452500_circ_g.22 Os02g0452500_circ_g.23 Os02g0452500_circ_g.24 Os02g0452500_circ_g.25 Os02g0452500_circ_g.26
Support reads	10/151/18/20
Tissues	leaf and panicle/root/root/shoot, root, seed, pistil
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0452500-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAAT
TGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTCctcaacatgaagagaaagcttctcaatt
tgatcgctgtactgtggaagagcttgaaccattttttgcaaatctctattggatatctctcccc
cagttctg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 143
Transcript exons: 14950803-14950855,14952419-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTAGCAAGTTTTG
TAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTG
CACTCTAGGGAATTC
Transcript length: 162
Transcript exons: 14950803-14950884,14952429-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTG
TCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 189
Transcript exons: 14950803-14950903,14952421-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGCAAGTTTTGTAGGCACTAAATCTCGTA
GTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 190
Transcript exons: 14950803-14950884,14952401-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGT
AGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 195
Transcript exons: 14950803-14950879,14952391-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAAT
CTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAA
TTC
Transcript length: 205
Transcript exons: 14950803-14950873,14952375-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTA
GGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCA
CTCTAGGGAATTC
Transcript length: 211
Transcript exons: 14950803-14950903,14952399-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGAGGCAATTCCAAACAGCAGCAGCAAGT
TTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGT
AGTGCACTCTAGGGAATTC
Transcript length: 213
Transcript exons: 14950803-14950879,14952373-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAA
GTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACG
GTAGTGCACTCTAGGGAATTC
Transcript length: 218
Transcript exons: 14950803-14950884,14952373-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGC
AGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCG
ACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 222
Transcript exons: 14950803-14950903,14952388-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGTCAATTTTGAAAGGCAATTCCAAACAG
CAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTT
GGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 229
Transcript exons: 14950803-14950876,14952354-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTC
CAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAA
TTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 229
Transcript exons: 14950803-14950895,14952373-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTC
CAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAA
TTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 235
Transcript exons: 14950803-14950901,14952373-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTCCGGTATTGATGTTTTCAATTTTGAAAGG
CAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAG
CATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 248
Transcript exons: 14950803-14950897,14952356-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGCTCAGTTTGAGGATAATCCGGTATTGATGTTTT
CAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTT
GTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 249
Transcript exons: 14950803-14950878,14952336-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTAACTATAAGTAGCTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTT
TCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGT
TGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 254
Transcript exons: 14950803-14950903,14952356-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGCTCAGTTTGAGGATAATCCGGTATTGA
TGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGT
AGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 261
Transcript exons: 14950803-14950898,14952323-14952423,14952445-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTACTGAACGATCAACTATAAGTAGCTCACATG
TCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGC
AGCAAGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGG
AATTC
Transcript length: 262
Transcript exons: 14950803-14950902,14952347-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGCTCACATGTCTCAGTTTGAGGATAATCC
GGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTA
AATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGG
GAATTC
Transcript length: 263
Transcript exons: 14950803-14950884,14952328-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATAACGATCAACTATAAGTAGCTCACATGTCTCAGTTTGAGGATAATC
CGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACT
AAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAG
GGAATTC
Transcript length: 272
Transcript exons: 14950803-14950897,14952332-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGATCAACTATAAGTAGCTCACATGTCTCAGTTTG
AGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTT
GTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGT
GCACTCTAGGGAATTC
Transcript length: 277
Transcript exons: 14950803-14950897,14952327-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGGAACGATCAACTATAAGTAGCTCACATGTCTCA
GTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAA
GTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACG
GTAGTGCACTCTAGGGAATTC
Transcript length: 281
Transcript exons: 14950803-14950897,14952317-14952417,14952424-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGCTGGTCTACTGAACGATCAACTATAAGTAGCTC
ACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACA
GCAGGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGA
CACGGTAGTGCACTCTAGGGAATTC
Transcript length: 283
Transcript exons: 14950803-14950900,14952324-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCACTGAACGATCAACTATAAGTAGCTCACAT
GTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAG
CAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGC
GACACGGTAGTGCACTCTAGGGAATTC
Transcript length: 546
Transcript exons: 14950803-14950899,14951783-14951856,14951932-14952030,14
952128-14952211,14952317-14952508
CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTTGCTTGCTGCAGTTGAGCAGCTTTATTCT
TGGACACAAAATTGCTCATCTTGTCATGCAGTCTTTCGCTTGCATCTGCTATGTGGGCATGCCG
GAGCTCAACCCATATTGGATCATGATCCTCCAATAGGACATCCTTCTTTTCAGTTGATGAACCA
TTTTTACTCGGAACCTCATGGACATACTTGTTGCCATCCATACATAGAAGATCATGGCACATCG
CGTCATATGTCCATTCATGAATGATTGGTGCAATCTGGTCTACTGAACGATCAACTATAAGTAG
CTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAA
ACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTG
TCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
						
					

						Genomic sequence
						
							CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT
TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGTAATTTAAACATGAAGCAATGACCATT
AAAATAATAAGTCAAGAACATTACAAACAAAATGGACTCATGCAACTCAACATACATGTCCAAA
TAAATATATAGAAAACTTTATGAATTTTTTTCTGGCATTCACTTTCCTAAAGAAACCACTCATC
CATTAACATATTTGTGTTTCAGGGTTAACTCAAAAATTGTGCAGCTATACACAGCTATGCAGAT
CATGTTGTATCTACAGTAGTTCTCCCTCCATTCCCAATTGATAGCTGCATCAGGTTTGTGCAGC
GATACCAAGGGAGAAATAAATCAAGCAGTAATTAGCAGCGATACTGGTTCGGTGGCCCACACAT
GGCGCATGACCATTCAACTTTTGATGGTAGATTTAACTAATCTTGAGATAATCACTCAGCATGC
ATGCATGTGATAAAAAAAGGAGGGGATTTAACTAATTTCCAGAAAATCTCTTCACATTAAATCC
ACGCATACATGCACCAGATAAACAAGGAAATCCACTGGCTCCCAATGTTGTGCGACAATCAAAC
CAGATTTTTTTTCGTTTCAGTAATATGATGATCAATTAGGAATGGAGGGAGCATTTAAGAAACA
GCACAGTCAACTCAGAAGGGTTGCGTTACAACTAACTTTTGTACATATATAAATCAGTAATCAA
CCTAACACATTTTGGACCTTTTAGTTTCATTAGCTTACAGTGTGTACTGGTGTAAGATTATGAT
TTCTCAAAATGACATACCCACCAATTTTATGATATTTTCTTCTAAGCTCCATTGTGATGCATGA
GTATTTTGCTAATTGTTTATAACAACGAATGGTCAAAAATCACAACAGAGCAATTTCCCTACTT
GGTTGAAACAATGCACAGACCTTGCTTGCTGCAGTTGAGCAGCTTTATTCTTGGACACAAAATT
GCTCATCTTGTCATGCAGTCTTTCGCTTGCCTGAAAGTATGATGGTTAATTATAAAGCTATCAA
ACACATGAATCGCAAAGAAAGGTACTGAGGAGTAATCTCACATCTGCTATGTGGGCATGCCGGA
GCTCAACCCATATTGGATCATGATCCTCCAATAGGACATCCTTCTTTTCAGTTGATGAACCATT
TTTACTCGGAACCTTTTCTTTCAGTCACACATAAGAATGGAATAACCATCAAATGAAACAACAG
GGAAGAATGTTACATAAAAATATATAAAAAAAGAAACTCTCTCACCTCATGGACATACTTGTTG
CCATCCATACATAGAAGATCATGGCACATCGCGTCATATGTCCATTCATGAATGATTGGTGCAA
TCTATGGTGCCAAAGAAATTATGAAGCAGCAGCATATATAGACCATGCTCAATGTAGCACTAGG
ATAGATGTCAAAACTGCGTATACAGGTATGTTTACAATGTACCTGGTCTACTGAACGATCAACT
ATAAGTAGCTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGC
AATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGC
ATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
						
					

			
		

Sequences
Splice junction sequence	AAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAAT TGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTCctcaacatgaagagaaagcttctcaatt tgatcgctgtactgtggaagagcttgaaccattttttgcaaatctctattggatatctctcccc cagttctg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 143 Transcript exons: 14950803-14950855,14952419-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTAGCAAGTTTTG TAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTG CACTCTAGGGAATTC Transcript length: 162 Transcript exons: 14950803-14950884,14952429-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTG TCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 189 Transcript exons: 14950803-14950903,14952421-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGCAAGTTTTGTAGGCACTAAATCTCGTA GTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 190 Transcript exons: 14950803-14950884,14952401-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGT AGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 195 Transcript exons: 14950803-14950879,14952391-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAAT CTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAA TTC Transcript length: 205 Transcript exons: 14950803-14950873,14952375-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTA GGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCA CTCTAGGGAATTC Transcript length: 211 Transcript exons: 14950803-14950903,14952399-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGAGGCAATTCCAAACAGCAGCAGCAAGT TTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGT AGTGCACTCTAGGGAATTC Transcript length: 213 Transcript exons: 14950803-14950879,14952373-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAA GTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACG GTAGTGCACTCTAGGGAATTC Transcript length: 218 Transcript exons: 14950803-14950884,14952373-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGC AGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCG ACACGGTAGTGCACTCTAGGGAATTC Transcript length: 222 Transcript exons: 14950803-14950903,14952388-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGTCAATTTTGAAAGGCAATTCCAAACAG CAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTT GGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 229 Transcript exons: 14950803-14950876,14952354-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTC CAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAA TTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 229 Transcript exons: 14950803-14950895,14952373-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTC CAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAA TTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 235 Transcript exons: 14950803-14950901,14952373-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTCCGGTATTGATGTTTTCAATTTTGAAAGG CAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAG CATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 248 Transcript exons: 14950803-14950897,14952356-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGCTCAGTTTGAGGATAATCCGGTATTGATGTTTT CAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTT GTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 249 Transcript exons: 14950803-14950878,14952336-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTAACTATAAGTAGCTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTT TCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGT TGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 254 Transcript exons: 14950803-14950903,14952356-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGCTCAGTTTGAGGATAATCCGGTATTGA TGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGT AGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC Transcript length: 261 Transcript exons: 14950803-14950898,14952323-14952423,14952445-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTACTGAACGATCAACTATAAGTAGCTCACATG TCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGC AGCAAGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGG AATTC Transcript length: 262 Transcript exons: 14950803-14950902,14952347-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGCTCACATGTCTCAGTTTGAGGATAATCC GGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTA AATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGG GAATTC Transcript length: 263 Transcript exons: 14950803-14950884,14952328-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATAACGATCAACTATAAGTAGCTCACATGTCTCAGTTTGAGGATAATC CGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACT AAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAG GGAATTC Transcript length: 272 Transcript exons: 14950803-14950897,14952332-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGATCAACTATAAGTAGCTCACATGTCTCAGTTTG AGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTT GTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGT GCACTCTAGGGAATTC Transcript length: 277 Transcript exons: 14950803-14950897,14952327-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGGAACGATCAACTATAAGTAGCTCACATGTCTCA GTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAA GTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACG GTAGTGCACTCTAGGGAATTC Transcript length: 281 Transcript exons: 14950803-14950897,14952317-14952417,14952424-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGCTGGTCTACTGAACGATCAACTATAAGTAGCTC ACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACA GCAGGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGA CACGGTAGTGCACTCTAGGGAATTC Transcript length: 283 Transcript exons: 14950803-14950900,14952324-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCACTGAACGATCAACTATAAGTAGCTCACAT GTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAG CAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGC GACACGGTAGTGCACTCTAGGGAATTC Transcript length: 546 Transcript exons: 14950803-14950899,14951783-14951856,14951932-14952030,14 952128-14952211,14952317-14952508 CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTTGCTTGCTGCAGTTGAGCAGCTTTATTCT TGGACACAAAATTGCTCATCTTGTCATGCAGTCTTTCGCTTGCATCTGCTATGTGGGCATGCCG GAGCTCAACCCATATTGGATCATGATCCTCCAATAGGACATCCTTCTTTTCAGTTGATGAACCA TTTTTACTCGGAACCTCATGGACATACTTGTTGCCATCCATACATAGAAGATCATGGCACATCG CGTCATATGTCCATTCATGAATGATTGGTGCAATCTGGTCTACTGAACGATCAACTATAAGTAG CTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAA ACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTG TCTTGGCGACACGGTAGTGCACTCTAGGGAATTC
Genomic sequence	CTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTT TGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTGGTAATTTAAACATGAAGCAATGACCATT AAAATAATAAGTCAAGAACATTACAAACAAAATGGACTCATGCAACTCAACATACATGTCCAAA TAAATATATAGAAAACTTTATGAATTTTTTTCTGGCATTCACTTTCCTAAAGAAACCACTCATC CATTAACATATTTGTGTTTCAGGGTTAACTCAAAAATTGTGCAGCTATACACAGCTATGCAGAT CATGTTGTATCTACAGTAGTTCTCCCTCCATTCCCAATTGATAGCTGCATCAGGTTTGTGCAGC GATACCAAGGGAGAAATAAATCAAGCAGTAATTAGCAGCGATACTGGTTCGGTGGCCCACACAT GGCGCATGACCATTCAACTTTTGATGGTAGATTTAACTAATCTTGAGATAATCACTCAGCATGC ATGCATGTGATAAAAAAAGGAGGGGATTTAACTAATTTCCAGAAAATCTCTTCACATTAAATCC ACGCATACATGCACCAGATAAACAAGGAAATCCACTGGCTCCCAATGTTGTGCGACAATCAAAC CAGATTTTTTTTCGTTTCAGTAATATGATGATCAATTAGGAATGGAGGGAGCATTTAAGAAACA GCACAGTCAACTCAGAAGGGTTGCGTTACAACTAACTTTTGTACATATATAAATCAGTAATCAA CCTAACACATTTTGGACCTTTTAGTTTCATTAGCTTACAGTGTGTACTGGTGTAAGATTATGAT TTCTCAAAATGACATACCCACCAATTTTATGATATTTTCTTCTAAGCTCCATTGTGATGCATGA GTATTTTGCTAATTGTTTATAACAACGAATGGTCAAAAATCACAACAGAGCAATTTCCCTACTT GGTTGAAACAATGCACAGACCTTGCTTGCTGCAGTTGAGCAGCTTTATTCTTGGACACAAAATT GCTCATCTTGTCATGCAGTCTTTCGCTTGCCTGAAAGTATGATGGTTAATTATAAAGCTATCAA ACACATGAATCGCAAAGAAAGGTACTGAGGAGTAATCTCACATCTGCTATGTGGGCATGCCGGA GCTCAACCCATATTGGATCATGATCCTCCAATAGGACATCCTTCTTTTCAGTTGATGAACCATT TTTACTCGGAACCTTTTCTTTCAGTCACACATAAGAATGGAATAACCATCAAATGAAACAACAG GGAAGAATGTTACATAAAAATATATAAAAAAAGAAACTCTCTCACCTCATGGACATACTTGTTG CCATCCATACATAGAAGATCATGGCACATCGCGTCATATGTCCATTCATGAATGATTGGTGCAA TCTATGGTGCCAAAGAAATTATGAAGCAGCAGCATATATAGACCATGCTCAATGTAGCACTAGG ATAGATGTCAAAACTGCGTATACAGGTATGTTTACAATGTACCTGGTCTACTGAACGATCAACT ATAAGTAGCTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGC AATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGC ATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_003894* osi_circ_011659 						
					
						PMCS
						0.518320692

Conservation Information
Conserved circRNAs	osi_circ_003894* osi_circ_011659
PMCS	0.518320692

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							14952177-14950805(-)
						
						Potential amino acid sequence
						
							MCHDLLCMDGNKYVHEVPSKNGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSK
NKAAQLQQARTGGEISNRDLQKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLR
DLVPTKLAAAVWNCLSKLKTSIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDG
NKYVHEVPSKNGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQAR
TGGEISNRDLQKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLRDLVPTKLAAA
VWNCLSKLKTSIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVPSK
NGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQARTGGEISNRDL
QKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLRDLVPTKLAAAVWNCLSKLKT
SIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVPSKNGSSTEKKDV
LLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQARTGGEISNRDLQKMVQALPQY
SDQIEKLSLHVE(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	14952177-14950805(-)
Potential amino acid sequence	MCHDLLCMDGNKYVHEVPSKNGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSK NKAAQLQQARTGGEISNRDLQKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLR DLVPTKLAAAVWNCLSKLKTSIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDG NKYVHEVPSKNGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQAR TGGEISNRDLQKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLRDLVPTKLAAA VWNCLSKLKTSIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVPSK NGSSTEKKDVLLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQARTGGEISNRDL QKMVQALPQYSDQIEKLSLHVEEFPRVHYRVAKTIDASVTTTLRDLVPTKLAAAVWNCLSKLKT SIPDYPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVPSKNGSSTEKKDV LLEDHDPIWVELRHAHIADASERLHDKMSNFVSKNKAAQLQQARTGGEISNRDLQKMVQALPQY SDQIEKLSLHVE(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Ye et al., 2016;Chu et al., 2017

circRNA

Detail information of Os02g0452500_circ_g.13

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