Plant Circular RNA Database

Detail information of GLYMA_19G250600_circ_g.3

			
						 General Information
					
						CircRNA Name
						GLYMA_19G250600_circ_g.3
					
						ID in PlantcircBase
						gma_circ_005082
					
						Alias
						Gm19circRNA494, gma-circRNA2671
					
						Organism
						
							Glycine max						
					
						Position
						
							chr19: 49657767-49661626  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Tophat, CIRI, find_circ
					
						Parent gene
						
							GLYMA_19G250600						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							GLYMA_19G250600_circ_g.2 GLYMA_19G250600_circ_g.4 GLYMA_19G250600_circ_g.5 GLYMA_19G250600_circ_g.6 GLYMA_19G250600_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf, root, stem, flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRG97079:7

General Information
CircRNA Name	GLYMA_19G250600_circ_g.3
ID in PlantcircBase	gma_circ_005082
Alias	Gm19circRNA494, gma-circRNA2671
Organism	Glycine max
Position	chr19: 49657767-49661626 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	Tophat, CIRI, find_circ
Parent gene	GLYMA_19G250600
Parent gene annotation	hypothetical protein
Parent gene strand	+
Alternative splicing	GLYMA_19G250600_circ_g.2 GLYMA_19G250600_circ_g.4 GLYMA_19G250600_circ_g.5 GLYMA_19G250600_circ_g.6 GLYMA_19G250600_circ_g.7
Support reads	NA
Tissues	leaf, root, stem, flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRG97079:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTA
CCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAcaactgttgcaacattgacagatcttgg
tttcttatggtttagagaattctatttagagtcttcacgagtcattcaggtaatacttatcagc
acaaaatt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 836
Transcript exons: 49657767-49657843,49658583-49658753,49659317-49659393,49
659489-49659591,49660942-49661061,49661165-49661308,4966
1483-49661626
CAACTGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTC
ACGAGTCATTCAGTTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAG
TCACCGAATTCTGGTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTC
AGCAAGCCTTGGTGTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTGGATCA
TTGTTTTGATATATTTGTTACAAAATTATGTGAAACCATTTTCACATATTACAAAAGTTGGGCG
GCATGTGAATTGCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGC
AACCCATAAGGCTCAATATGCTGCTTAAAATGACTAGAGTGAAGCTGCTTGGAAGGATGATTAA
TTTGCGAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTT
GATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGAATTAGAGAAGTTGTTGGATGTCTTAA
AACATTCCCATGAACTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGA
GATGCAAGAGAACATTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGATTTGGTCTGAG
ATGCATAGTGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCAT
CAAGAACGGTTCCTGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTAGTTTCTATTGTGGTAC
TCAA
						
					

						Genomic sequence
						
							CAACTGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTC
ACGAGTCATTCAGGTAATACTTATCAGCACAAAATTATTTGAATTTCAAATCTATCATGTTCAG
CAGAAACACTCTTTGATAAGACCAGCTACAAATTTCATAGCTACTTGCAAGATATTGATTGCAT
CAAGCATTCATTCATCGGAATCTATTTATAAATTGTAATTGAATAAGAAACTCTAATAATGGTT
GGCTAGCAACTTGGAATGCGAATTGTTAGAGCCTCCAGGTATTTCCTTGAAAAATTTCAATGAA
GATGGTAGGATGATGGTGTTTGTATTTGTTATTTTTTTTTTTCTGAAAAACTCTTCTAATATTG
ATGTTTTTTTTTTCTATCCTGGCCCTTTAAAAGTGAATGTCTTGTCTCTATTTTTGTATACTTT
AGTTGTCCCCTACTCCCCACCCCATCCCAAATCTGTTAATTTTACATAAACTACTCATGGAGAC
CAAAATAACTAGCAAAAGAAGGCTGAGTATATCATTGAAACAGGTTTTATTTATAAAAAAAAAA
AAGTTATATGTTATGTGCATCTAATCTTTCTTCATTTTTGCTGATAGCTTTTTATGAACTTTAA
CATTATTCTGTTATCAAGAAGTAATTTCTGTGTAATGAGTTTCTCAATGTTGTTTTTCAAACGT
CAAAATTTCCAAATTCTGCTAAACTCGTGATCTTTTTATTTTTATTTTCTTTTATGCATTTGTT
TTCCACCTCCCCCTCTTGTACTAAATTTAGTTAATTTATTCCATATAGTTTCCAATTGAATGCT
CCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTGGTCTTCTCGAGAGTGT
TCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGTGTTGCTGAAGCAACGG
TTTTTATACGATGAAATTGAGGCTGAGGTATTATACATTTTTAACTTAATGGCTAATGCTAGAT
GATTATATGATGAATGTCCTGGAGCAGTATAATATCTGATACAGATGATTTTAGGTGGATATGC
TGTAGTGCACCAAATTCATGGGTGTAACTTATGTGCTGATAGGCATCATCCTACAGTTACCGAA
TTTAAGAGATGATAAAAAGAATACTAGGGGAATTGAGCACAACGAGTAGAAGTGGGAATTGGGC
TATAAAATTCTTGCTTGCATGGCAAGGTGGGAAGGAAGGGGAAACTTGGGAGGGTGAAAATAAG
GGAGGGGTGGGAGGATCTTTGTGGTGGCATCCAGAAAATTGAGTGGGGACAGGGAGGAGGCAGG
ACCCTCAATGAGCCTGCATTTTTATGTGTTTTCTTTTCTATTTTGAGAGTTGTTTGTAAATTCT
TGCCTCTGTTGACATCAGTTTATACCGGTAGCAGAGAGTAAATTCTGGTGCTAGTACAATAAGA
TTTTTGCTTCTGATTACCAGTTTCCTATCATATGCTTTCTGCATTCATTGACTCTTTTCTGTTT
ACCTTTTTTCACAGGTGGATCATTGTTTTGATATATTTGTTACAAAATTATGTGAAACCATTTT
CACATATTACAAAAGTTGGGCGGCATGGTATGCTCATTATTTCTCTGGCTTATTCAGCTTTTCT
TTTGATTATTTCCATGGACAAACCTTTTTTCTTACTGATGGAGGCCTAAATCATGCAGTGAATT
GCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGCAACCCATAAGG
CTCAATATGCTGCTTAAAATGACTAGAGTGAAGGTGAATGAATTACACTATCATAATTTTTATT
TTCCATGATTAGATTTGGTGCATTAAAGTGTAAACTGGGTGTATGCTACCAGATTGATAATTTT
TTGATATGAAAATAGCCCAAGGTGCAGGGATTGAAAATATATGTACATGCTATTAGATACCCAT
CTCCCAGCAGGGTTTGGAAATGCTTGACTGAAGCCTTAGTTTAAGTGAACAAAGCTTAACTGTT
TCATTACTTCTTTATTTAGTATTTATCAGGGTGTTAACAATTCAAATCTCATTATCTTTTCAAG
TGATCTTGGAATCATGTGACTTACTATAACTTCAGGAATTATACAAAACAGATGTCTTTGTGTA
CTATTATAAGCAGGAATAAGTTTTTAGAATATTTTTCTTCCTAAGAATTTAATATTTTACTGGT
TATCAGTTAGTTGCATTTGCATCAAAATCTTCCCACAAGTTAGCAAAGCTTGTTGATCAGAAAG
TCCAAGTTTGAAATCTTGTGAATGGAAAAACAGGTGCTGGGAGAGTGTTGCCTGTCTAATTGGT
TCAACCCAACTCAACTTGGATTAGTTAAGGTCCAAGGTGGCTTTTGGATGTTTGGTCTATCTTT
TTGGAGCTTCTCCTCTCTTTGAAAGGAGAAACCAGGCCAAATACAATTCTAAAAAAACTATTAA
GTATAAAAGTGGCTTTTTTCTATATGAACTAAGGAAGAAAACATAAAAAAAGAAGAGCTTTTAG
ATAATCTATATTTTAGGAACTTCTGCTTTCCCTTCTTCACTTTTCCAAATCCCAAAACTCAGTA
GTGTGCTAACCAAGAATTATTAACTAAAAATTTACTTTTAAGCTGAACGAATATAAAATTATCA
AACACATTCAATTATAAAGTTTTATTTTTACTTGAACTTTAAAGTAGTTTTTAAGATCCAAAAA
AATCAATCCAAAGGCCACCTAGTGAAAAAGTTCTCTAAAGTTATTGACGGAGAGAATAAAGACA
TCTTGGTAGGTGTTTTACTTTTCAATATTTTGTTTCTAGGGTAATTCCATTTTAATCATTAATA
AAATTCTTGTAGAAACTTCTGGTGTCAAAAGGATGGAAAGTAGGTTCCGATCATCTTCAATGCC
ACATCCTGCAACAAACTAATGGAGATTGTTTAAGAAAATAATAATGAAGGCTAAGATTGATGCT
TACATGAATTATAACTTTTATTTTCATGGTGTATTCGTTTTTCTATTTAGATGATTTCTCTCAC
ACTCACACTCCCACACTCACATGTATGTTCTGCTGGATGTCATAATTAGAATTTGAGTGAGTTG
CAATTACTCTCATGTGATTAAATATCTTTTGTTGCACAGCTGCTTGGAAGGATGATTAATTTGC
GAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTTGATCG
TTTTGAGTGTCAGGATCTGTGTGCCATAGTGGTTAGTGATTTTACCTTTGCTACTTCCCTGCCC
AACAATTATGAACTACTTTTTCTTTTCTCAATGTTCATTAACTAATGTAATACTGACTATTTTA
TTTCAGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGAACTACTGTCTAGAGATC
TTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAACATTTCCCTTGTATCATT
TTCTAGTCGATTGGCCTCACAGGTTTGCCCCTTTGAGCTCTAAAGATGTACTTTAATTTTGATG
TCTTCCTGTTATTTTTTTAATCTTGAATCCTCATATTGAAAGTTTGAAACCACTATTTGAATGG
TAATTAATAATTTCATGACTTGATCTGTTTCCTACAATTTCATTGATATATTTCTTTACGTATG
CTAGATTTGGTCTGAGATGCATAGTGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAA
CGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTA
GTTTCTATTGTGGTACTCAA
						
					

			
		

Sequences
Splice junction sequence	CTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTA CCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAcaactgttgcaacattgacagatcttgg tttcttatggtttagagaattctatttagagtcttcacgagtcattcaggtaatacttatcagc acaaaatt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 836 Transcript exons: 49657767-49657843,49658583-49658753,49659317-49659393,49 659489-49659591,49660942-49661061,49661165-49661308,4966 1483-49661626 CAACTGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTC ACGAGTCATTCAGTTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAG TCACCGAATTCTGGTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTC AGCAAGCCTTGGTGTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTGGATCA TTGTTTTGATATATTTGTTACAAAATTATGTGAAACCATTTTCACATATTACAAAAGTTGGGCG GCATGTGAATTGCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGC AACCCATAAGGCTCAATATGCTGCTTAAAATGACTAGAGTGAAGCTGCTTGGAAGGATGATTAA TTTGCGAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTT GATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGAATTAGAGAAGTTGTTGGATGTCTTAA AACATTCCCATGAACTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGA GATGCAAGAGAACATTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGATTTGGTCTGAG ATGCATAGTGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCAT CAAGAACGGTTCCTGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTAGTTTCTATTGTGGTAC TCAA
Genomic sequence	CAACTGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTC ACGAGTCATTCAGGTAATACTTATCAGCACAAAATTATTTGAATTTCAAATCTATCATGTTCAG CAGAAACACTCTTTGATAAGACCAGCTACAAATTTCATAGCTACTTGCAAGATATTGATTGCAT CAAGCATTCATTCATCGGAATCTATTTATAAATTGTAATTGAATAAGAAACTCTAATAATGGTT GGCTAGCAACTTGGAATGCGAATTGTTAGAGCCTCCAGGTATTTCCTTGAAAAATTTCAATGAA GATGGTAGGATGATGGTGTTTGTATTTGTTATTTTTTTTTTTCTGAAAAACTCTTCTAATATTG ATGTTTTTTTTTTCTATCCTGGCCCTTTAAAAGTGAATGTCTTGTCTCTATTTTTGTATACTTT AGTTGTCCCCTACTCCCCACCCCATCCCAAATCTGTTAATTTTACATAAACTACTCATGGAGAC CAAAATAACTAGCAAAAGAAGGCTGAGTATATCATTGAAACAGGTTTTATTTATAAAAAAAAAA AAGTTATATGTTATGTGCATCTAATCTTTCTTCATTTTTGCTGATAGCTTTTTATGAACTTTAA CATTATTCTGTTATCAAGAAGTAATTTCTGTGTAATGAGTTTCTCAATGTTGTTTTTCAAACGT CAAAATTTCCAAATTCTGCTAAACTCGTGATCTTTTTATTTTTATTTTCTTTTATGCATTTGTT TTCCACCTCCCCCTCTTGTACTAAATTTAGTTAATTTATTCCATATAGTTTCCAATTGAATGCT CCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTGGTCTTCTCGAGAGTGT TCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGTGTTGCTGAAGCAACGG TTTTTATACGATGAAATTGAGGCTGAGGTATTATACATTTTTAACTTAATGGCTAATGCTAGAT GATTATATGATGAATGTCCTGGAGCAGTATAATATCTGATACAGATGATTTTAGGTGGATATGC TGTAGTGCACCAAATTCATGGGTGTAACTTATGTGCTGATAGGCATCATCCTACAGTTACCGAA TTTAAGAGATGATAAAAAGAATACTAGGGGAATTGAGCACAACGAGTAGAAGTGGGAATTGGGC TATAAAATTCTTGCTTGCATGGCAAGGTGGGAAGGAAGGGGAAACTTGGGAGGGTGAAAATAAG GGAGGGGTGGGAGGATCTTTGTGGTGGCATCCAGAAAATTGAGTGGGGACAGGGAGGAGGCAGG ACCCTCAATGAGCCTGCATTTTTATGTGTTTTCTTTTCTATTTTGAGAGTTGTTTGTAAATTCT TGCCTCTGTTGACATCAGTTTATACCGGTAGCAGAGAGTAAATTCTGGTGCTAGTACAATAAGA TTTTTGCTTCTGATTACCAGTTTCCTATCATATGCTTTCTGCATTCATTGACTCTTTTCTGTTT ACCTTTTTTCACAGGTGGATCATTGTTTTGATATATTTGTTACAAAATTATGTGAAACCATTTT CACATATTACAAAAGTTGGGCGGCATGGTATGCTCATTATTTCTCTGGCTTATTCAGCTTTTCT TTTGATTATTTCCATGGACAAACCTTTTTTCTTACTGATGGAGGCCTAAATCATGCAGTGAATT GCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGCAACCCATAAGG CTCAATATGCTGCTTAAAATGACTAGAGTGAAGGTGAATGAATTACACTATCATAATTTTTATT TTCCATGATTAGATTTGGTGCATTAAAGTGTAAACTGGGTGTATGCTACCAGATTGATAATTTT TTGATATGAAAATAGCCCAAGGTGCAGGGATTGAAAATATATGTACATGCTATTAGATACCCAT CTCCCAGCAGGGTTTGGAAATGCTTGACTGAAGCCTTAGTTTAAGTGAACAAAGCTTAACTGTT TCATTACTTCTTTATTTAGTATTTATCAGGGTGTTAACAATTCAAATCTCATTATCTTTTCAAG TGATCTTGGAATCATGTGACTTACTATAACTTCAGGAATTATACAAAACAGATGTCTTTGTGTA CTATTATAAGCAGGAATAAGTTTTTAGAATATTTTTCTTCCTAAGAATTTAATATTTTACTGGT TATCAGTTAGTTGCATTTGCATCAAAATCTTCCCACAAGTTAGCAAAGCTTGTTGATCAGAAAG TCCAAGTTTGAAATCTTGTGAATGGAAAAACAGGTGCTGGGAGAGTGTTGCCTGTCTAATTGGT TCAACCCAACTCAACTTGGATTAGTTAAGGTCCAAGGTGGCTTTTGGATGTTTGGTCTATCTTT TTGGAGCTTCTCCTCTCTTTGAAAGGAGAAACCAGGCCAAATACAATTCTAAAAAAACTATTAA GTATAAAAGTGGCTTTTTTCTATATGAACTAAGGAAGAAAACATAAAAAAAGAAGAGCTTTTAG ATAATCTATATTTTAGGAACTTCTGCTTTCCCTTCTTCACTTTTCCAAATCCCAAAACTCAGTA GTGTGCTAACCAAGAATTATTAACTAAAAATTTACTTTTAAGCTGAACGAATATAAAATTATCA AACACATTCAATTATAAAGTTTTATTTTTACTTGAACTTTAAAGTAGTTTTTAAGATCCAAAAA AATCAATCCAAAGGCCACCTAGTGAAAAAGTTCTCTAAAGTTATTGACGGAGAGAATAAAGACA TCTTGGTAGGTGTTTTACTTTTCAATATTTTGTTTCTAGGGTAATTCCATTTTAATCATTAATA AAATTCTTGTAGAAACTTCTGGTGTCAAAAGGATGGAAAGTAGGTTCCGATCATCTTCAATGCC ACATCCTGCAACAAACTAATGGAGATTGTTTAAGAAAATAATAATGAAGGCTAAGATTGATGCT TACATGAATTATAACTTTTATTTTCATGGTGTATTCGTTTTTCTATTTAGATGATTTCTCTCAC ACTCACACTCCCACACTCACATGTATGTTCTGCTGGATGTCATAATTAGAATTTGAGTGAGTTG CAATTACTCTCATGTGATTAAATATCTTTTGTTGCACAGCTGCTTGGAAGGATGATTAATTTGC GAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTTGATCG TTTTGAGTGTCAGGATCTGTGTGCCATAGTGGTTAGTGATTTTACCTTTGCTACTTCCCTGCCC AACAATTATGAACTACTTTTTCTTTTCTCAATGTTCATTAACTAATGTAATACTGACTATTTTA TTTCAGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGAACTACTGTCTAGAGATC TTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAACATTTCCCTTGTATCATT TTCTAGTCGATTGGCCTCACAGGTTTGCCCCTTTGAGCTCTAAAGATGTACTTTAATTTTGATG TCTTCCTGTTATTTTTTTAATCTTGAATCCTCATATTGAAAGTTTGAAACCACTATTTGAATGG TAATTAATAATTTCATGACTTGATCTGTTTCCTACAATTTCATTGATATATTTCTTTACGTATG CTAGATTTGGTCTGAGATGCATAGTGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAA CGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTA GTTTCTATTGTGGTACTCAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.811435905

Conservation Information
Conserved circRNAs	NA
PMCS	0.811435905

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							49661254-49657806(+)
49658611-49657781(+)
49657783-49661560(-)
						
						Potential amino acid sequence
						
							MRCKRTFPLYHFLVDWPHRFGLRCIVIFCQISFSAILLNVLSDHQERFLFKSHLYPLLSLVSIV
VLNNCCNIDRSWFLMV*(+)
MLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETI
FTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVF
RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSR
LASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQQLLQH*(+)
MLQQLLSTTIETRLRRGYRWLLNRNRS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						cytoplasmic male sterility

Functional Information
Coding potential	Y
Potential coding position	49661254-49657806(+) 49658611-49657781(+) 49657783-49661560(-)
Potential amino acid sequence	MRCKRTFPLYHFLVDWPHRFGLRCIVIFCQISFSAILLNVLSDHQERFLFKSHLYPLLSLVSIV VLNNCCNIDRSWFLMV(+) MLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETI FTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVF RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSR LASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQQLLQH(+) MLQQLLSTTIETRLRRGYRWLLNRNRS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	cytoplasmic male sterility

			
						 Other Information
					
						References
						Zhao et al., 2017a; Chen et al., 2018

circRNA

Detail information of GLYMA_19G250600_circ_g.3

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