Plant Circular RNA Database

Detail information of GLYMA_19G250600_circ_g.6

			
						 General Information
					
						CircRNA Name
						GLYMA_19G250600_circ_g.6
					
						ID in PlantcircBase
						gma_circ_007697
					
						Alias
						gma-circRNA2673
					
						Organism
						
							Glycine max						
					
						Position
						
							chr19: 49658583-49662450  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							GLYMA_19G250600						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							GLYMA_19G250600_circ_g.2 GLYMA_19G250600_circ_g.3 GLYMA_19G250600_circ_g.4 GLYMA_19G250600_circ_g.5 GLYMA_19G250600_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRG97079:7

General Information
CircRNA Name	GLYMA_19G250600_circ_g.6
ID in PlantcircBase	gma_circ_007697
Alias	gma-circRNA2673
Organism	Glycine max
Position	chr19: 49658583-49662450 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	GLYMA_19G250600
Parent gene annotation	hypothetical protein
Parent gene strand	+
Alternative splicing	GLYMA_19G250600_circ_g.2 GLYMA_19G250600_circ_g.3 GLYMA_19G250600_circ_g.4 GLYMA_19G250600_circ_g.5 GLYMA_19G250600_circ_g.7
Support reads	NA
Tissues	flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRG97079:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTCTTTGGAACACCTCACATGTTTTCTATTGTTCGACTTCTGGGATCCCGATCATTACCTTGG
CTTATTAGAGCTCTTCTTGATCACATATCAAACAAGtttccaattgaatgctcccttccttgga
tgttggtggattgtgtacttgagtcaccgaattctggtcttctcgagagtgttctaatgccatt
tgacatct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 903
Transcript exons: 49658583-49658753,49659317-49659393,49659489-49659591,49
660942-49661061,49661165-49661308,49661483-49661626,4966
2307-49662450
TTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTG
GTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGT
GTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATA
TTTGTTACAAAATTATGTGAAACCATTTTCACATATTACAAAAGTTGGGCGGCATGTGAATTGC
TTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGCAACCCATAAGGCT
CAATATGCTGCTTAAAATGACTAGAGTGAAGCTGCTTGGAAGGATGATTAATTTGCGAAGTTTG
ATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTTGATCGTTTTGAGT
GTCAGGATCTGTGTGCCATAGTGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGA
ACTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAAC
ATTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGATTTGGTCTGAGATGCATAGTGATT
TTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCC
TGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAGATTTGAAT
TCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTGGAACACCTCACATGTTTTCTA
TTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAGAGCTCTTCTTGATCACATATC
AAACAAG
						
					

						Genomic sequence
						
							TTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTG
GTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGT
GTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTATTATACATTTTTAACTTA
ATGGCTAATGCTAGATGATTATATGATGAATGTCCTGGAGCAGTATAATATCTGATACAGATGA
TTTTAGGTGGATATGCTGTAGTGCACCAAATTCATGGGTGTAACTTATGTGCTGATAGGCATCA
TCCTACAGTTACCGAATTTAAGAGATGATAAAAAGAATACTAGGGGAATTGAGCACAACGAGTA
GAAGTGGGAATTGGGCTATAAAATTCTTGCTTGCATGGCAAGGTGGGAAGGAAGGGGAAACTTG
GGAGGGTGAAAATAAGGGAGGGGTGGGAGGATCTTTGTGGTGGCATCCAGAAAATTGAGTGGGG
ACAGGGAGGAGGCAGGACCCTCAATGAGCCTGCATTTTTATGTGTTTTCTTTTCTATTTTGAGA
GTTGTTTGTAAATTCTTGCCTCTGTTGACATCAGTTTATACCGGTAGCAGAGAGTAAATTCTGG
TGCTAGTACAATAAGATTTTTGCTTCTGATTACCAGTTTCCTATCATATGCTTTCTGCATTCAT
TGACTCTTTTCTGTTTACCTTTTTTCACAGGTGGATCATTGTTTTGATATATTTGTTACAAAAT
TATGTGAAACCATTTTCACATATTACAAAAGTTGGGCGGCATGGTATGCTCATTATTTCTCTGG
CTTATTCAGCTTTTCTTTTGATTATTTCCATGGACAAACCTTTTTTCTTACTGATGGAGGCCTA
AATCATGCAGTGAATTGCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGC
CGTGCAACCCATAAGGCTCAATATGCTGCTTAAAATGACTAGAGTGAAGGTGAATGAATTACAC
TATCATAATTTTTATTTTCCATGATTAGATTTGGTGCATTAAAGTGTAAACTGGGTGTATGCTA
CCAGATTGATAATTTTTTGATATGAAAATAGCCCAAGGTGCAGGGATTGAAAATATATGTACAT
GCTATTAGATACCCATCTCCCAGCAGGGTTTGGAAATGCTTGACTGAAGCCTTAGTTTAAGTGA
ACAAAGCTTAACTGTTTCATTACTTCTTTATTTAGTATTTATCAGGGTGTTAACAATTCAAATC
TCATTATCTTTTCAAGTGATCTTGGAATCATGTGACTTACTATAACTTCAGGAATTATACAAAA
CAGATGTCTTTGTGTACTATTATAAGCAGGAATAAGTTTTTAGAATATTTTTCTTCCTAAGAAT
TTAATATTTTACTGGTTATCAGTTAGTTGCATTTGCATCAAAATCTTCCCACAAGTTAGCAAAG
CTTGTTGATCAGAAAGTCCAAGTTTGAAATCTTGTGAATGGAAAAACAGGTGCTGGGAGAGTGT
TGCCTGTCTAATTGGTTCAACCCAACTCAACTTGGATTAGTTAAGGTCCAAGGTGGCTTTTGGA
TGTTTGGTCTATCTTTTTGGAGCTTCTCCTCTCTTTGAAAGGAGAAACCAGGCCAAATACAATT
CTAAAAAAACTATTAAGTATAAAAGTGGCTTTTTTCTATATGAACTAAGGAAGAAAACATAAAA
AAAGAAGAGCTTTTAGATAATCTATATTTTAGGAACTTCTGCTTTCCCTTCTTCACTTTTCCAA
ATCCCAAAACTCAGTAGTGTGCTAACCAAGAATTATTAACTAAAAATTTACTTTTAAGCTGAAC
GAATATAAAATTATCAAACACATTCAATTATAAAGTTTTATTTTTACTTGAACTTTAAAGTAGT
TTTTAAGATCCAAAAAAATCAATCCAAAGGCCACCTAGTGAAAAAGTTCTCTAAAGTTATTGAC
GGAGAGAATAAAGACATCTTGGTAGGTGTTTTACTTTTCAATATTTTGTTTCTAGGGTAATTCC
ATTTTAATCATTAATAAAATTCTTGTAGAAACTTCTGGTGTCAAAAGGATGGAAAGTAGGTTCC
GATCATCTTCAATGCCACATCCTGCAACAAACTAATGGAGATTGTTTAAGAAAATAATAATGAA
GGCTAAGATTGATGCTTACATGAATTATAACTTTTATTTTCATGGTGTATTCGTTTTTCTATTT
AGATGATTTCTCTCACACTCACACTCCCACACTCACATGTATGTTCTGCTGGATGTCATAATTA
GAATTTGAGTGAGTTGCAATTACTCTCATGTGATTAAATATCTTTTGTTGCACAGCTGCTTGGA
AGGATGATTAATTTGCGAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTG
AGTTTTTATTTGATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGTTAGTGATTTTACCTT
TGCTACTTCCCTGCCCAACAATTATGAACTACTTTTTCTTTTCTCAATGTTCATTAACTAATGT
AATACTGACTATTTTATTTCAGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGAA
CTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAACA
TTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGGTTTGCCCCTTTGAGCTCTAAAGATG
TACTTTAATTTTGATGTCTTCCTGTTATTTTTTTAATCTTGAATCCTCATATTGAAAGTTTGAA
ACCACTATTTGAATGGTAATTAATAATTTCATGACTTGATCTGTTTCCTACAATTTCATTGATA
TATTTCTTTACGTATGCTAGATTTGGTCTGAGATGCATAGTGATTTTTTGCCAAATTTCATTCT
CTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTA
CCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAGTAAGTATTCCTCTTACTGCCTTTAATG
GTACAGACATTATAAAATCAATTGCAGTATTTTTAATGGCATAGATAATTATCTATTTCTGATT
ATAAACATGTTAAATACAAGTACAAGTAGTTCAATTTTTTGCTCAACTCAGATGTTTACATGGG
TAAAATAATGTGATTTACTTCCTCTGACTGAATTTGTTCATCTGACTTTCCATTTTGGGAAGTT
CCAAAATGTATGTCAGCGTGTCGCATAAGACCTTAGGACCAATATGCCAGGTGGGTCTGTTCCA
AGTGTAGAAGTATTGGGAAAAACCCAAGTCTCACATTGGCTAGAGATAGTGCCAACATAGAGTA
TATAAGTGGAGGACAAGTGTCATCCTATGAGTTAGCTTTTGGGGTTGACTTAGACTCAAACCCA
CATTCTAAGATGGTATCAGAGCATATCCTAGATCCATTCAAAGGGCCACGCACCAAGTTTTTTT
GAGTTGAGAGCGCCTTTTTTTTCCCTAGCTTTTACTCTAATCTTTTTAGCTATCATTTTTGTGT
TTCTTCTATTCATTTTTTTTTACTTGTTGAGTGTATATATAATGAGAGAAAAGGAGATGAATGA
TTGTGTTTGTGTGCGTGCTTTCTACAATTTTCTCTATGTACATATATAGAAGTTTCTCATTATC
TCACTCTGATAGGATTTGAATTCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTG
GAACACCTCACATGTTTTCTATTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAG
AGCTCTTCTTGATCACATATCAAACAAG
						
					

			
		

Sequences
Splice junction sequence	ATTCTTTGGAACACCTCACATGTTTTCTATTGTTCGACTTCTGGGATCCCGATCATTACCTTGG CTTATTAGAGCTCTTCTTGATCACATATCAAACAAGtttccaattgaatgctcccttccttgga tgttggtggattgtgtacttgagtcaccgaattctggtcttctcgagagtgttctaatgccatt tgacatct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 903 Transcript exons: 49658583-49658753,49659317-49659393,49659489-49659591,49 660942-49661061,49661165-49661308,49661483-49661626,4966 2307-49662450 TTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTG GTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGT GTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATA TTTGTTACAAAATTATGTGAAACCATTTTCACATATTACAAAAGTTGGGCGGCATGTGAATTGC TTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGCCGTGCAACCCATAAGGCT CAATATGCTGCTTAAAATGACTAGAGTGAAGCTGCTTGGAAGGATGATTAATTTGCGAAGTTTG ATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTGAGTTTTTATTTGATCGTTTTGAGT GTCAGGATCTGTGTGCCATAGTGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGA ACTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAAC ATTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGATTTGGTCTGAGATGCATAGTGATT TTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCC TGTTCAAAAGCCATCTGTACCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAGATTTGAAT TCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTGGAACACCTCACATGTTTTCTA TTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAGAGCTCTTCTTGATCACATATC AAACAAG
Genomic sequence	TTTCCAATTGAATGCTCCCTTCCTTGGATGTTGGTGGATTGTGTACTTGAGTCACCGAATTCTG GTCTTCTCGAGAGTGTTCTAATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTGGT GTTGCTGAAGCAACGGTTTTTATACGATGAAATTGAGGCTGAGGTATTATACATTTTTAACTTA ATGGCTAATGCTAGATGATTATATGATGAATGTCCTGGAGCAGTATAATATCTGATACAGATGA TTTTAGGTGGATATGCTGTAGTGCACCAAATTCATGGGTGTAACTTATGTGCTGATAGGCATCA TCCTACAGTTACCGAATTTAAGAGATGATAAAAAGAATACTAGGGGAATTGAGCACAACGAGTA GAAGTGGGAATTGGGCTATAAAATTCTTGCTTGCATGGCAAGGTGGGAAGGAAGGGGAAACTTG GGAGGGTGAAAATAAGGGAGGGGTGGGAGGATCTTTGTGGTGGCATCCAGAAAATTGAGTGGGG ACAGGGAGGAGGCAGGACCCTCAATGAGCCTGCATTTTTATGTGTTTTCTTTTCTATTTTGAGA GTTGTTTGTAAATTCTTGCCTCTGTTGACATCAGTTTATACCGGTAGCAGAGAGTAAATTCTGG TGCTAGTACAATAAGATTTTTGCTTCTGATTACCAGTTTCCTATCATATGCTTTCTGCATTCAT TGACTCTTTTCTGTTTACCTTTTTTCACAGGTGGATCATTGTTTTGATATATTTGTTACAAAAT TATGTGAAACCATTTTCACATATTACAAAAGTTGGGCGGCATGGTATGCTCATTATTTCTCTGG CTTATTCAGCTTTTCTTTTGATTATTTCCATGGACAAACCTTTTTTCTTACTGATGGAGGCCTA AATCATGCAGTGAATTGCTTGATCCTTCATTCCTCTTTGCTTCGGACAATGCAGAAAAGTATGC CGTGCAACCCATAAGGCTCAATATGCTGCTTAAAATGACTAGAGTGAAGGTGAATGAATTACAC TATCATAATTTTTATTTTCCATGATTAGATTTGGTGCATTAAAGTGTAAACTGGGTGTATGCTA CCAGATTGATAATTTTTTGATATGAAAATAGCCCAAGGTGCAGGGATTGAAAATATATGTACAT GCTATTAGATACCCATCTCCCAGCAGGGTTTGGAAATGCTTGACTGAAGCCTTAGTTTAAGTGA ACAAAGCTTAACTGTTTCATTACTTCTTTATTTAGTATTTATCAGGGTGTTAACAATTCAAATC TCATTATCTTTTCAAGTGATCTTGGAATCATGTGACTTACTATAACTTCAGGAATTATACAAAA CAGATGTCTTTGTGTACTATTATAAGCAGGAATAAGTTTTTAGAATATTTTTCTTCCTAAGAAT TTAATATTTTACTGGTTATCAGTTAGTTGCATTTGCATCAAAATCTTCCCACAAGTTAGCAAAG CTTGTTGATCAGAAAGTCCAAGTTTGAAATCTTGTGAATGGAAAAACAGGTGCTGGGAGAGTGT TGCCTGTCTAATTGGTTCAACCCAACTCAACTTGGATTAGTTAAGGTCCAAGGTGGCTTTTGGA TGTTTGGTCTATCTTTTTGGAGCTTCTCCTCTCTTTGAAAGGAGAAACCAGGCCAAATACAATT CTAAAAAAACTATTAAGTATAAAAGTGGCTTTTTTCTATATGAACTAAGGAAGAAAACATAAAA AAAGAAGAGCTTTTAGATAATCTATATTTTAGGAACTTCTGCTTTCCCTTCTTCACTTTTCCAA ATCCCAAAACTCAGTAGTGTGCTAACCAAGAATTATTAACTAAAAATTTACTTTTAAGCTGAAC GAATATAAAATTATCAAACACATTCAATTATAAAGTTTTATTTTTACTTGAACTTTAAAGTAGT TTTTAAGATCCAAAAAAATCAATCCAAAGGCCACCTAGTGAAAAAGTTCTCTAAAGTTATTGAC GGAGAGAATAAAGACATCTTGGTAGGTGTTTTACTTTTCAATATTTTGTTTCTAGGGTAATTCC ATTTTAATCATTAATAAAATTCTTGTAGAAACTTCTGGTGTCAAAAGGATGGAAAGTAGGTTCC GATCATCTTCAATGCCACATCCTGCAACAAACTAATGGAGATTGTTTAAGAAAATAATAATGAA GGCTAAGATTGATGCTTACATGAATTATAACTTTTATTTTCATGGTGTATTCGTTTTTCTATTT AGATGATTTCTCTCACACTCACACTCCCACACTCACATGTATGTTCTGCTGGATGTCATAATTA GAATTTGAGTGAGTTGCAATTACTCTCATGTGATTAAATATCTTTTGTTGCACAGCTGCTTGGA AGGATGATTAATTTGCGAAGTTTGATCACTGAACGGATGAACAAGGTTTTCCGTGAAAATATTG AGTTTTTATTTGATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGTTAGTGATTTTACCTT TGCTACTTCCCTGCCCAACAATTATGAACTACTTTTTCTTTTCTCAATGTTCATTAACTAATGT AATACTGACTATTTTATTTCAGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGAA CTACTGTCTAGAGATCTTTCTGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAACA TTTCCCTTGTATCATTTTCTAGTCGATTGGCCTCACAGGTTTGCCCCTTTGAGCTCTAAAGATG TACTTTAATTTTGATGTCTTCCTGTTATTTTTTTAATCTTGAATCCTCATATTGAAAGTTTGAA ACCACTATTTGAATGGTAATTAATAATTTCATGACTTGATCTGTTTCCTACAATTTCATTGATA TATTTCTTTACGTATGCTAGATTTGGTCTGAGATGCATAGTGATTTTTTGCCAAATTTCATTCT CTGCAATACTACTCAACGTTTTATCAGATCATCAAGAACGGTTCCTGTTCAAAAGCCATCTGTA CCCTCTTCTAAGCCTAGTTTCTATTGTGGTACTCAAGTAAGTATTCCTCTTACTGCCTTTAATG GTACAGACATTATAAAATCAATTGCAGTATTTTTAATGGCATAGATAATTATCTATTTCTGATT ATAAACATGTTAAATACAAGTACAAGTAGTTCAATTTTTTGCTCAACTCAGATGTTTACATGGG TAAAATAATGTGATTTACTTCCTCTGACTGAATTTGTTCATCTGACTTTCCATTTTGGGAAGTT CCAAAATGTATGTCAGCGTGTCGCATAAGACCTTAGGACCAATATGCCAGGTGGGTCTGTTCCA AGTGTAGAAGTATTGGGAAAAACCCAAGTCTCACATTGGCTAGAGATAGTGCCAACATAGAGTA TATAAGTGGAGGACAAGTGTCATCCTATGAGTTAGCTTTTGGGGTTGACTTAGACTCAAACCCA CATTCTAAGATGGTATCAGAGCATATCCTAGATCCATTCAAAGGGCCACGCACCAAGTTTTTTT GAGTTGAGAGCGCCTTTTTTTTCCCTAGCTTTTACTCTAATCTTTTTAGCTATCATTTTTGTGT TTCTTCTATTCATTTTTTTTTACTTGTTGAGTGTATATATAATGAGAGAAAAGGAGATGAATGA TTGTGTTTGTGTGCGTGCTTTCTACAATTTTCTCTATGTACATATATAGAAGTTTCTCATTATC TCACTCTGATAGGATTTGAATTCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTG GAACACCTCACATGTTTTCTATTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAG AGCTCTTCTTGATCACATATCAAACAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.318587127

Conservation Information
Conserved circRNAs	NA
PMCS	0.318587127

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							49658611-49662447(+)
49658682-49662437(-)
49658675-49662421(-)
						
					

						Potential amino acid sequence
						
							MLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETI
FTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVF
RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSR
LASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSAHQSFARL
HSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNKFPIECSLPWMLVDCVLESPNSGLLESVL
MPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAACELLDPSFLF
ASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVFRENIEFLFDRFECQDLCAI
VELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMHSDFLPNFIL
CNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSAHQSFARLHSGFFGTPHMFSIVRLLGS
RSLPWLIRALLDHISNKFPIECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQ
RFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLL
KMTRVKLLGRMINLRSLITERMNKVFRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSR
DLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKP
SVPSSKPSFYCGTQDLNSAHQSFARLHSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNKFP
IECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFV
TKLCETIFTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLIT
ERMNKVFRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENIS
LVSFSSRLASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSA
HQSFARLHSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNK(+)
MSNGIRTLSRRPEFGDSSTQSTNIQGREHSIGNLFDM*(-)
MALEHSREDQNSVTQVHNPPTSKEGSIQLETCLICDQEEL*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	49658611-49662447(+) 49658682-49662437(-) 49658675-49662421(-)
Potential amino acid sequence	MLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETI FTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVF RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSR LASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSAHQSFARL HSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNKFPIECSLPWMLVDCVLESPNSGLLESVL MPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAACELLDPSFLF ASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVFRENIEFLFDRFECQDLCAI VELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMHSDFLPNFIL CNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSAHQSFARLHSGFFGTPHMFSIVRLLGS RSLPWLIRALLDHISNKFPIECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQ RFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLL KMTRVKLLGRMINLRSLITERMNKVFRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSR DLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKP SVPSSKPSFYCGTQDLNSAHQSFARLHSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNKFP IECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFV TKLCETIFTYYKSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLIT ERMNKVFRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENIS LVSFSSRLASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNSA HQSFARLHSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNK(+) MSNGIRTLSRRPEFGDSSTQSTNIQGREHSIGNLFDM(-) MALEHSREDQNSVTQVHNPPTSKEGSIQLETCLICDQEEL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chen et al., 2018

circRNA

Detail information of GLYMA_19G250600_circ_g.6

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