Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0310900_circ_ig.2 |
ID in PlantcircBase | osa_circ_023387 |
Alias | Os04circ02681/Os_ciR2292 |
Organism | Oryza sativa |
Position | chr4: 14089538-14090081 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ig-circRNA |
Identification method | CIRCexplorer, SMALT, Segemehl, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os04g0311100_circ_igg.1 Os04g0310900_circ_ig.3 Os04g0310900_circ_ig.4 Os04g0311100_circ_igg.5 EPlOSAG00000049403_circ_ig.1 |
Support reads | 2/5/3 |
Tissues | panicle/root/root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_014224 |
PMCS | 0.343584329 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015;Ye et al., 2015;Chu et al., 2017 |