Plant Circular RNA Database

Detail information of Os01g0337600_circ_g.7

			
						 General Information
					
						CircRNA Name
						Os01g0337600_circ_g.7
					
						ID in PlantcircBase
						osa_circ_001622
					
						Alias
						Os_ciR4236
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 13254817-13259255  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os01g0337600						
					
						Parent gene annotation
						
							Similar to predicted protein. (Os01t0337600-01);Similar to bindi
ng. (Os01t0337600-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0337600_circ_g.5 Os01g0337600_circ_g.6 Os01g0337600_circ_g.8 Os01g0337600_circ_g.9 Os01g0337600_circ_g.10 Os01g0337600_circ_g.11 Os01g0337600_circ_g.12 Os01g0337600_circ_g.13 Os01g0337600_circ_g.14 Os01g0337600_circ_g.15 						
					
						Support reads
						6
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0337600-01:13
Os01t0337600-02:13

General Information
CircRNA Name	Os01g0337600_circ_g.7
ID in PlantcircBase	osa_circ_001622
Alias	Os_ciR4236
Organism	Oryza sativa
Position	chr1: 13254817-13259255 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os01g0337600
Parent gene annotation	Similar to predicted protein. (Os01t0337600-01);Similar to bindi ng. (Os01t0337600-02)
Parent gene strand	-
Alternative splicing	Os01g0337600_circ_g.5 Os01g0337600_circ_g.6 Os01g0337600_circ_g.8 Os01g0337600_circ_g.9 Os01g0337600_circ_g.10 Os01g0337600_circ_g.11 Os01g0337600_circ_g.12 Os01g0337600_circ_g.13 Os01g0337600_circ_g.14 Os01g0337600_circ_g.15
Support reads	6
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0337600-01:13 Os01t0337600-02:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTTCTTGCTTTCTGTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTC
TTCATCCAAAACAGTCAAACCAAGTTCTTTAGAATCcggaacagtcgtaattgttgaacaagcg
gcaaactcttactgagagtgcaaaattcatgcaagaacagcacctacaaacaccaaaaacaatc
ttagcagt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 125
Transcript exons: 13254817-13254879,13259194-13259255
CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGT
GCATGAGCAATGTTTCATTGTCTTCTTCATCCAAAACAGTCAAACCAAGTTCTTTAGAATC
Transcript length: 992
Transcript exons: 13254817-13254887,13255442-13255537,13255626-13255703,13
255804-13255872,13255951-13256018,13256159-13256236,1325
6311-13256410,13257123-13257182,13257609-13257688,132587
15-13258771,13258851-13258900,13258991-13259075,13259156
-13259255
CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGA
ACAGCACCAATTCTCTTTTTGATTCCATAGAAATATTTGATAATCTCATCCTAGCAAACAATTC
TTGGATAAAGCAAGAATCATCCTTTAGTAAGGAAATAACAGCGGCATTGTTCGAATGTATCATC
GTGTTAAGACTAGCTAGAGTGCCATCATCCAACACTCGAGGTAATATAACATCCTTTAGATAGC
CTATTCTATATGTTTGATGTATCTTTGAAACCACAGAAACATTTTTAATAGGTATGGCCTCTTT
GAAAACTACATGATCCTTTAGAAAAGCGCGATGCTTTTGTACTTTAGGAACATCTGGGTCATAT
TCAAGGGCACCTATGATGTCAAGAATAAACTCATCTGAGAAAATCTTGTCAAAGATTGATGAAC
TGTTCAGCAATATGATTCCCCTGACTAATTTGAAGATCATGTGAAGATCATCTAAGTTCTCTAA
ATCCTCGCATATTCGAAAAATGTCCAGTAACTTTGGGAAAAACTCGCGATCTTGTGTTATCAAC
TCTGCCACGCGCATCTGATCTGTAATGCCACCCTCCAATATAGTCTTTAAAATTAAAGGAAGAT
TGGATAACTCAACAGGTGGAAGCTCCCTCAGCTCACCATTAACGGAGCGGAAGGATTCATCATT
TGAATGCAATACTCTAGAGGCTTCTAGAGAAACCGAAGTTGGACGAGGACCGACACCAAGGTTA
TTAAACTGAATGTTTCTCTGAATGTCACATATGTTGTCCCATATGTATGAGCACCCAGCAGCTT
CCTGAAAGCTCAACGCTAATTCTGTTGCTACTTCTGGATCCCTCCATGAGATGATTGTATCTTC
TTGCTTTCTGTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTCTTCA
TCCAAAACAGTCAAACCAAGTTCTTTAGAATC
						
					

						Genomic sequence
						
							CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGA
ACAGCACCTACAAACACCAAAAACAATCTTAGCAGTGTCACCAAGGCAACGAATAACACACTAA
GTATTTTCAGCTTCTGGATCATCTCGACATGCAAACTATGCAAACGATTTTGGCTTTTTTTATA
GCTTTGAATGTGAGTCTCACATGCAGGTCCCAGACCCATGTCTGAGGCATCCAACAGCATCTTC
TGAACTAAAAAAATTGCAACATATTTGTGAATCCCTTTAACAAGTAACGACATTTCAAGACCTA
AAGTTCAACACCCACAGAGAAACAACTAATCTCTGTTAAGAATCATCGATAATGCAGCAGGAAA
TTCATGAAGACGATAACAGTTTCAGTTCTTAGTCACTGGCAGCAAGAATGACAGTGATGATAAA
TAGAATAATATGCTGCAGGTTTAAGGAGGCAATTGTATCTGCCAGCTAAATTTACTGAACTTCC
TAAATTTCATTGTGGTAATGCCAAGAAAATTGTGTTAATCACCAAAAAGGAAATAGCTGCAATT
TTGTTCATGTTAGACTCATCATGAACAAAATGGTTGAATGTGTGCTCACCAATTCTCTTTTTGA
TTCCATAGAAATATTTGATAATCTCATCCTAGCAAACAATTCTTGGATAAAGCAAGAATCATCC
TTTAGTAAGGAAATAACCTGCACACAAATCATTGTCATAAGCGACAAAAACAAGGAAATTTTAA
GATCAAGCAGACCAACACCGAGTGCAAGCTGAAACACTAACAGCGGCATTGTTCGAATGTATCA
TCGTGTTAAGACTAGCTAGAGTGCCATCATCCAACACTCGAGGTAATATAACATCCTGCAATTA
ACAAGAAAAAAAGCCCAATCTGTCAAATATGCATTCAAAAATAATATCAACAGAATTCTATCAT
GCAGAATAAGTACAAGGTAGCACTGACCTTTAGATAGCCTATTCTATATGTTTGATGTATCTTT
GAAACCACAGAAACATTTTTAATAGGTATGGCCTGTGGGGAAGAACAATGATCTACATTAACAT
TCAAATCATTTCTGAATCAGACCAAGGTGTGCAATGATCAGAGTACCTCTTTGAAAACTACATG
ATCCTTTAGAAAAGCGCGATGCTTTTGTACTTTAGGAACATCTGGGTCATCTGTATAGAATAGA
ACTCAATATATGAAGAAAAATGCGGAAGCAACCCCACAAGCATTTCAGTTAAAACCATAGCATA
TGTAATTTCATCATATGGAAATGAAATGGGGGAAACAAGAAGCAACAAAGGAGAAAACATACAT
TCAAGGGCACCTATGATGTCAAGAATAAACTCATCTGAGAAAATCTTGTCAAAGATTGATGAAC
TGTTCAGCAATACTGCAGAATGATAAACAGTAAATACTAATCTGTGAAATTTAGAAAACAAAAC
TTTCATACAGATATGTACTTACTGATTCCCCTGACTAATTTGAAGATCATGTGAAGATCATCTA
AGTTCTCTAAATCCTCGCATATTCGAAAAATGTCCAGTAACTTTGGGAAAAACTCGCGCTGCAA
GAATTTGTAAATGCAGTAGTTAAAGATTTCTAGTCAAACAGGACTAATCAAGTAATCATACCCA
AAATAACAAGTATAATCATCATATGTCACTTCCAAGTGTGCCACTGTTGCTTCCACCATGCCAT
GTAAACAAAAAGAAGATGGAATGTCAACAGGAGAACACCACACCCCAGTCATCTCTGTTCTTAT
TACGAATAGCCTTTAGATCTAATAGCATACTGTGTGCGACCCATGGAAGCTGTCCTTCAACATA
AAGTAAGACAGTAAGACTATAAGAGGCAAGGTTGCTCCCGTCCCACATTCCTTACCAAAGAGAT
GTCTTTGGCTTTGATGATTCAATTAACTTCTAGTTATACCTTCTATATAGTTACAACCCACTAA
GCCTAAAGCTCAACATGCAAACAACCTAATATCTCGTTATTTTTCTCCTACCTTCCACTTCTTG
TGATGCAAATCTTGGCCAGCAATCTAATATTTCATCTACAATCTCCTACATAGTCTACTAAATT
TATTTCTCTACAAACATGGCTTGGCAAACCAGTTTTATTTGTTGTTAATAACTAATATCCGTTT
TACTCCTGGCTTGGTTGCTGGAAAAAAAAACATATTGAAGATTACTTAGTAATTCCCACAGCAA
AGCTCGGAGAATCACCTAGTAAATATAGTACATGCAACCATCCCAGGCACAAAGATGAGGACTT
ACATCTTGTGTTATCAACTCTGCCACGCGCATCTGATCTGTAATGCCACCCTCCAATATAGTCT
GCAGATTTAGATGAACAATATTTTTGTTGTCAGCAAGGATTCTCAAATTTGCAGCAGAAAATGT
AGGTCACCCAAACACTAACTGTAAAGTGAATGTCAAATTTCAGGATTGATATAGCCAGCATGCA
AGTTACTCTGCACCCATTCTGCTGAGGCTTCCACAGCACTCAAAAGAATTCTCCACAGATATTA
ATAATATACATAAGTAGATGATCAGAAGAACAAGCAAAGGCTTATAGCCTTATAGGATGAACAC
AAGGTTCATGATTTTTCATATTTACTCGTCAAGGAGATGAGACTTCAAAACATGGTCAAGCAAA
GAAAAAAGACTAGCAAAAAAATAGAAGAATTTTTGCTATTGAGCATGAAAGGTAAGATTAATAA
AAAAAATGACTTCGTATAGGAACAAAAAAAAAATCCAAACCTTTAAAATTAAAGGAAGATTGGA
TAACTCAACAGGTGGAAGCTCCCTCAGCTCACCATTAACGGAGCGGAAGGATTCATCTGCAATG
AAACCTACAATTAGTTACAACAATACTAATGAAAACAGTACTATCAAAGGCCTCACAACCATAG
CAATGTCATGCATTTAGCACCAAGGATAAATGATTATTCAAGAAAAAGCACAATTAAGACCGTA
GGGTGATCTTTCAAAGCTCTCAAGATTTTCTCAGGGGTAAATTCTAAGACTTGGAAGTGGACAG
ATAGCTTGTCACTGGTCTTTTATCTTAGTAACACATTTGATAACAGCCATGTTTGTTCTGAGTT
CTGACCATTTCCTTAACACCTCAAGTGAGTTTTTTGCCTTCCATCGCATTGGAAAATGTGAAAT
GCTAGATGGCAACAGCCAACAGGGATATGTGCAACTGCAATCCAGTGTACTCTCCAAGTGTGTC
AAAAGAACAACACGGCTTTGATAGGTGAATGCCATATTAAGGACTTCCAATCTCGTCATCAAGT
CATTCAAATATTTATTCATGTCGGCCAGCCCATGTCGTATGTTAAGTCAATTATTAGGAAGGAC
TCAAATAACGATGGGAGACTCTTTAGTTAGGAGATTCAGAAAATTGTTAGGGAAACTAGAGAAG
GTCAGATGAGTTTCCATGGTATTAGAGATTAGTTTCTTAGGGGTGAAGTAAGTCCCCCTATATA
TAAAGGAGATGAGTTTCCATGTGAATCAAGAGATGAAAATATAAAGTTAGTCCAATGTTCATCA
GAGCATCTCTAGTTGGGGAAAAGCCCTGCCGGTCTAAAGATGGGGAGTGCCCTATTCACTGGTC
TTCAAACCTTAACCTCAAGCCAATGCACACTAAACAATACAAAACAGTCCTAATTGAGTAATTT
GTCAAATTAATACTGCAAGATTGAGTAATGCAGTACCACAGCTGGTAACTTACACCACTAACGT
AGGGCAGATTTAAGTTATAGCAACAAAAAGGCCCTTTTCAATAACATAACGCCCAGGAAGAAAT
GGATAATTTGGTTACAAAATTAAGCAGTGCAGCACGCATTTAGCAAAGTGGGATCTACCATTTG
AATGCAATACTCTAGAGGCTTCTAGAGAAACCGAAGTTGGACGAGGACCGACTTCAAGAGCTGC
AGGAAATAGTTAAAAGTAAAACAAGGAGGGAAACAAATGAGCAGTGATGGGCTTTAAACAACTC
ACCACCAAGGTTATTAAACTGAATGTTTCTCTGAATGTCACATATGTTGTCCCTGCAGAGAACC
ACCAAAAGCCAATGATACAAAATAAGATATCAGTGCATAGTTGAAGGAAATGGTAATTACTAAT
TAGATCAGCAATACCATATGTATGAGCACCCAGCAGCTTCCTGAAAGCTCAACGCTAATTCTGT
TGCTACTTCTGGATCCCTCCATGAGATGATTGTATCTAATAAAGAAAATTGTTACAGGAAGTTA
TTTATATATATGAATGGTTAACTTGTAAAAAAAACAAGTTTAGTAGTTCACCTTCTTGCTTTCT
GTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTCTTCATCCAAAACA
GTCAAACCAAGTTCTTTAGAATC
						
					

			
		

Sequences
Splice junction sequence	CTTCTTGCTTTCTGTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTC TTCATCCAAAACAGTCAAACCAAGTTCTTTAGAATCcggaacagtcgtaattgttgaacaagcg gcaaactcttactgagagtgcaaaattcatgcaagaacagcacctacaaacaccaaaaacaatc ttagcagt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 125 Transcript exons: 13254817-13254879,13259194-13259255 CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGT GCATGAGCAATGTTTCATTGTCTTCTTCATCCAAAACAGTCAAACCAAGTTCTTTAGAATC Transcript length: 992 Transcript exons: 13254817-13254887,13255442-13255537,13255626-13255703,13 255804-13255872,13255951-13256018,13256159-13256236,1325 6311-13256410,13257123-13257182,13257609-13257688,132587 15-13258771,13258851-13258900,13258991-13259075,13259156 -13259255 CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGA ACAGCACCAATTCTCTTTTTGATTCCATAGAAATATTTGATAATCTCATCCTAGCAAACAATTC TTGGATAAAGCAAGAATCATCCTTTAGTAAGGAAATAACAGCGGCATTGTTCGAATGTATCATC GTGTTAAGACTAGCTAGAGTGCCATCATCCAACACTCGAGGTAATATAACATCCTTTAGATAGC CTATTCTATATGTTTGATGTATCTTTGAAACCACAGAAACATTTTTAATAGGTATGGCCTCTTT GAAAACTACATGATCCTTTAGAAAAGCGCGATGCTTTTGTACTTTAGGAACATCTGGGTCATAT TCAAGGGCACCTATGATGTCAAGAATAAACTCATCTGAGAAAATCTTGTCAAAGATTGATGAAC TGTTCAGCAATATGATTCCCCTGACTAATTTGAAGATCATGTGAAGATCATCTAAGTTCTCTAA ATCCTCGCATATTCGAAAAATGTCCAGTAACTTTGGGAAAAACTCGCGATCTTGTGTTATCAAC TCTGCCACGCGCATCTGATCTGTAATGCCACCCTCCAATATAGTCTTTAAAATTAAAGGAAGAT TGGATAACTCAACAGGTGGAAGCTCCCTCAGCTCACCATTAACGGAGCGGAAGGATTCATCATT TGAATGCAATACTCTAGAGGCTTCTAGAGAAACCGAAGTTGGACGAGGACCGACACCAAGGTTA TTAAACTGAATGTTTCTCTGAATGTCACATATGTTGTCCCATATGTATGAGCACCCAGCAGCTT CCTGAAAGCTCAACGCTAATTCTGTTGCTACTTCTGGATCCCTCCATGAGATGATTGTATCTTC TTGCTTTCTGTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTCTTCA TCCAAAACAGTCAAACCAAGTTCTTTAGAATC
Genomic sequence	CGGAACAGTCGTAATTGTTGAACAAGCGGCAAACTCTTACTGAGAGTGCAAAATTCATGCAAGA ACAGCACCTACAAACACCAAAAACAATCTTAGCAGTGTCACCAAGGCAACGAATAACACACTAA GTATTTTCAGCTTCTGGATCATCTCGACATGCAAACTATGCAAACGATTTTGGCTTTTTTTATA GCTTTGAATGTGAGTCTCACATGCAGGTCCCAGACCCATGTCTGAGGCATCCAACAGCATCTTC TGAACTAAAAAAATTGCAACATATTTGTGAATCCCTTTAACAAGTAACGACATTTCAAGACCTA AAGTTCAACACCCACAGAGAAACAACTAATCTCTGTTAAGAATCATCGATAATGCAGCAGGAAA TTCATGAAGACGATAACAGTTTCAGTTCTTAGTCACTGGCAGCAAGAATGACAGTGATGATAAA TAGAATAATATGCTGCAGGTTTAAGGAGGCAATTGTATCTGCCAGCTAAATTTACTGAACTTCC TAAATTTCATTGTGGTAATGCCAAGAAAATTGTGTTAATCACCAAAAAGGAAATAGCTGCAATT TTGTTCATGTTAGACTCATCATGAACAAAATGGTTGAATGTGTGCTCACCAATTCTCTTTTTGA TTCCATAGAAATATTTGATAATCTCATCCTAGCAAACAATTCTTGGATAAAGCAAGAATCATCC TTTAGTAAGGAAATAACCTGCACACAAATCATTGTCATAAGCGACAAAAACAAGGAAATTTTAA GATCAAGCAGACCAACACCGAGTGCAAGCTGAAACACTAACAGCGGCATTGTTCGAATGTATCA TCGTGTTAAGACTAGCTAGAGTGCCATCATCCAACACTCGAGGTAATATAACATCCTGCAATTA ACAAGAAAAAAAGCCCAATCTGTCAAATATGCATTCAAAAATAATATCAACAGAATTCTATCAT GCAGAATAAGTACAAGGTAGCACTGACCTTTAGATAGCCTATTCTATATGTTTGATGTATCTTT GAAACCACAGAAACATTTTTAATAGGTATGGCCTGTGGGGAAGAACAATGATCTACATTAACAT TCAAATCATTTCTGAATCAGACCAAGGTGTGCAATGATCAGAGTACCTCTTTGAAAACTACATG ATCCTTTAGAAAAGCGCGATGCTTTTGTACTTTAGGAACATCTGGGTCATCTGTATAGAATAGA ACTCAATATATGAAGAAAAATGCGGAAGCAACCCCACAAGCATTTCAGTTAAAACCATAGCATA TGTAATTTCATCATATGGAAATGAAATGGGGGAAACAAGAAGCAACAAAGGAGAAAACATACAT TCAAGGGCACCTATGATGTCAAGAATAAACTCATCTGAGAAAATCTTGTCAAAGATTGATGAAC TGTTCAGCAATACTGCAGAATGATAAACAGTAAATACTAATCTGTGAAATTTAGAAAACAAAAC TTTCATACAGATATGTACTTACTGATTCCCCTGACTAATTTGAAGATCATGTGAAGATCATCTA AGTTCTCTAAATCCTCGCATATTCGAAAAATGTCCAGTAACTTTGGGAAAAACTCGCGCTGCAA GAATTTGTAAATGCAGTAGTTAAAGATTTCTAGTCAAACAGGACTAATCAAGTAATCATACCCA AAATAACAAGTATAATCATCATATGTCACTTCCAAGTGTGCCACTGTTGCTTCCACCATGCCAT GTAAACAAAAAGAAGATGGAATGTCAACAGGAGAACACCACACCCCAGTCATCTCTGTTCTTAT TACGAATAGCCTTTAGATCTAATAGCATACTGTGTGCGACCCATGGAAGCTGTCCTTCAACATA AAGTAAGACAGTAAGACTATAAGAGGCAAGGTTGCTCCCGTCCCACATTCCTTACCAAAGAGAT GTCTTTGGCTTTGATGATTCAATTAACTTCTAGTTATACCTTCTATATAGTTACAACCCACTAA GCCTAAAGCTCAACATGCAAACAACCTAATATCTCGTTATTTTTCTCCTACCTTCCACTTCTTG TGATGCAAATCTTGGCCAGCAATCTAATATTTCATCTACAATCTCCTACATAGTCTACTAAATT TATTTCTCTACAAACATGGCTTGGCAAACCAGTTTTATTTGTTGTTAATAACTAATATCCGTTT TACTCCTGGCTTGGTTGCTGGAAAAAAAAACATATTGAAGATTACTTAGTAATTCCCACAGCAA AGCTCGGAGAATCACCTAGTAAATATAGTACATGCAACCATCCCAGGCACAAAGATGAGGACTT ACATCTTGTGTTATCAACTCTGCCACGCGCATCTGATCTGTAATGCCACCCTCCAATATAGTCT GCAGATTTAGATGAACAATATTTTTGTTGTCAGCAAGGATTCTCAAATTTGCAGCAGAAAATGT AGGTCACCCAAACACTAACTGTAAAGTGAATGTCAAATTTCAGGATTGATATAGCCAGCATGCA AGTTACTCTGCACCCATTCTGCTGAGGCTTCCACAGCACTCAAAAGAATTCTCCACAGATATTA ATAATATACATAAGTAGATGATCAGAAGAACAAGCAAAGGCTTATAGCCTTATAGGATGAACAC AAGGTTCATGATTTTTCATATTTACTCGTCAAGGAGATGAGACTTCAAAACATGGTCAAGCAAA GAAAAAAGACTAGCAAAAAAATAGAAGAATTTTTGCTATTGAGCATGAAAGGTAAGATTAATAA AAAAAATGACTTCGTATAGGAACAAAAAAAAAATCCAAACCTTTAAAATTAAAGGAAGATTGGA TAACTCAACAGGTGGAAGCTCCCTCAGCTCACCATTAACGGAGCGGAAGGATTCATCTGCAATG AAACCTACAATTAGTTACAACAATACTAATGAAAACAGTACTATCAAAGGCCTCACAACCATAG CAATGTCATGCATTTAGCACCAAGGATAAATGATTATTCAAGAAAAAGCACAATTAAGACCGTA GGGTGATCTTTCAAAGCTCTCAAGATTTTCTCAGGGGTAAATTCTAAGACTTGGAAGTGGACAG ATAGCTTGTCACTGGTCTTTTATCTTAGTAACACATTTGATAACAGCCATGTTTGTTCTGAGTT CTGACCATTTCCTTAACACCTCAAGTGAGTTTTTTGCCTTCCATCGCATTGGAAAATGTGAAAT GCTAGATGGCAACAGCCAACAGGGATATGTGCAACTGCAATCCAGTGTACTCTCCAAGTGTGTC AAAAGAACAACACGGCTTTGATAGGTGAATGCCATATTAAGGACTTCCAATCTCGTCATCAAGT CATTCAAATATTTATTCATGTCGGCCAGCCCATGTCGTATGTTAAGTCAATTATTAGGAAGGAC TCAAATAACGATGGGAGACTCTTTAGTTAGGAGATTCAGAAAATTGTTAGGGAAACTAGAGAAG GTCAGATGAGTTTCCATGGTATTAGAGATTAGTTTCTTAGGGGTGAAGTAAGTCCCCCTATATA TAAAGGAGATGAGTTTCCATGTGAATCAAGAGATGAAAATATAAAGTTAGTCCAATGTTCATCA GAGCATCTCTAGTTGGGGAAAAGCCCTGCCGGTCTAAAGATGGGGAGTGCCCTATTCACTGGTC TTCAAACCTTAACCTCAAGCCAATGCACACTAAACAATACAAAACAGTCCTAATTGAGTAATTT GTCAAATTAATACTGCAAGATTGAGTAATGCAGTACCACAGCTGGTAACTTACACCACTAACGT AGGGCAGATTTAAGTTATAGCAACAAAAAGGCCCTTTTCAATAACATAACGCCCAGGAAGAAAT GGATAATTTGGTTACAAAATTAAGCAGTGCAGCACGCATTTAGCAAAGTGGGATCTACCATTTG AATGCAATACTCTAGAGGCTTCTAGAGAAACCGAAGTTGGACGAGGACCGACTTCAAGAGCTGC AGGAAATAGTTAAAAGTAAAACAAGGAGGGAAACAAATGAGCAGTGATGGGCTTTAAACAACTC ACCACCAAGGTTATTAAACTGAATGTTTCTCTGAATGTCACATATGTTGTCCCTGCAGAGAACC ACCAAAAGCCAATGATACAAAATAAGATATCAGTGCATAGTTGAAGGAAATGGTAATTACTAAT TAGATCAGCAATACCATATGTATGAGCACCCAGCAGCTTCCTGAAAGCTCAACGCTAATTCTGT TGCTACTTCTGGATCCCTCCATGAGATGATTGTATCTAATAAAGAAAATTGTTACAGGAAGTTA TTTATATATATGAATGGTTAACTTGTAAAAAAAACAAGTTTAGTAGTTCACCTTCTTGCTTTCT GTAGATATCTTCAGAAGTAATGTTGTGCATGAGCAATGTTTCATTGTCTTCTTCATCCAAAACA GTCAAACCAAGTTCTTTAGAATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.222568792

Conservation Information
Conserved circRNAs	NA
PMCS	0.222568792

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							13259189-13254856(+)
13259200-13259236(-)
13254876-13259250(-)
						
						Potential amino acid sequence
						
							MLCMSNVSLSSSSKTVKPSSLESGTVVIVEQAANSY*(+)
MHNITSEDIYRKQEDTIISWRDPEVATELALSFQEAAGCSYIWDNICDIQRNIQFNNLGVGPRP
TSVSLEASRVLHSNDESFRSVNGELRELPPVELSNLPLILKTILEGGITDQMRVAELITQDREF
FPKLLDIFRICEDLENLDDLHMIFKLVRGIILLNSSSIFDKIFSDEFILDIIGALEYDPDVPKV
QKHRAFLKDHVVFKEAIPIKNVSVVSKIHQTYRIGYLKDVILPRVLDDGTLASLNTMIHSNNAA
VISLLKDDSCFIQELFARMRLSNISMESKRELVLFLHEFCTLSKSLPLVQQLRLFRILKNLV*(
-)
MNFALSVRVCRLFNNYDCSGF*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	13259189-13254856(+) 13259200-13259236(-) 13254876-13259250(-)
Potential amino acid sequence	MLCMSNVSLSSSSKTVKPSSLESGTVVIVEQAANSY(+) MHNITSEDIYRKQEDTIISWRDPEVATELALSFQEAAGCSYIWDNICDIQRNIQFNNLGVGPRP TSVSLEASRVLHSNDESFRSVNGELRELPPVELSNLPLILKTILEGGITDQMRVAELITQDREF FPKLLDIFRICEDLENLDDLHMIFKLVRGIILLNSSSIFDKIFSDEFILDIIGALEYDPDVPKV QKHRAFLKDHVVFKEAIPIKNVSVVSKIHQTYRIGYLKDVILPRVLDDGTLASLNTMIHSNNAA VISLLKDDSCFIQELFARMRLSNISMESKRELVLFLHEFCTLSKSLPLVQQLRLFRILKNLV( -) MNFALSVRVCRLFNNYDCSGF*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os01g0337600_circ_g.7

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