Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Solyc06g071820.2_circ_g.2 |
ID in PlantcircBase | sly_circ_002053 |
Alias | SL3.0ch06:44382735|44383871 |
Organism | Solanum lycopersicum |
Position | chr6: 44241307-44242443 JBrowse» |
Reference genome | SL2.50.38 |
Type | ei-circRNA |
Identification method | CIRI; find_circ |
Parent gene | Solyc06g071820.2 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | Solyc06g071820.2_circ_g.1 Solyc06g071820.2_circ_g.3 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Solyc06g071820.2.1:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.159887951 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to low-temperature stress |
Other Information | |
---|---|
References | Yang et al., 2020 |