Splice junction sequence |
ATGAATAAGAAAAAAAATTACCCATATAATCCTCGGGATAAATAGACCAGCTAATGAAGTTGGA ACAAACATAAGGAATGCCAAATAAGGGTGAGCAAACcaaccatgaacttctgtcggagtgatac ttttcttcaaaagataatagtgagttatccttcagccattttgctgcctcaggcgcattattga aaagaaac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 766 Transcript exons: 11554926-11555086,11555901-11556122,11556396-11556520,11 557381-11557499,11557804-11557863,11558135-11558213 CAACCATGAACTTCTGTCGGAGTGATACTTTTCTTCAAAAGATAATAGTGAGTTATCCTTCAGC CATTTTGCTGCCTCAGGCGCATTATTGAAAAGAAACTCCAATGAATTAGCATCAACCACAGAGA AACCATAGTGTGACTCCACAATACTATTAGCATCTGTAACAAAGGTGTGTTGAAGAACAACTCT TTTAGGTGCTCCAGTGCTGTAAGGAAACAGTTGAGATGAGATCGCCAAACCAACCACTGTAACT TGTAACAAGCCATGGAGGATGGAGGTTTTGGCCAGCCATCGACTAGCAATAGGTGTTACTGGAC CAAAACACCATCCCACGACCAATCCAATTACTGACCCAACAATGACATCAGCTACAAAATATCC GTATGGTTTTGGGAGAGATCCCATCATTCCCATCTTCTCAATCAAGAACTGGATAAGGAAACCA CCATAGTAAAGACAATAAAGGAGACATGGGATCATAGGTACCACATAACCAACCAACAACTTTG GTGATTGTTTGTTCCAATGTTTCCAACTAATGCTACAGATAAAACGCCCAAGAAGCATCGACAT GGAAATGAAGAATGTTAGAAAACCTCCACTCAGGCCAGCTAGCATGTAAACCAAAGTTATTAAG GAATAGAGCCCGAAAGCACCCCAAAAATGTGCTTGCTCTGATAATCCCCATATAATCCTCGGGA TAAATAGACCAGCTAATGAAGTTGGAACAAACATAAGGAATGCCAAATAAGGGTGAGCAAAC
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Genomic sequence |
CAACCATGAACTTCTGTCGGAGTGATACTTTTCTTCAAAAGATAATAGTGAGTTATCCTTCAGC CATTTTGCTGCCTCAGGCGCATTATTGAAAAGAAACTCCAATGAATTAGCATCAACCACAGAGA AACCATAGTGTGACTCCACAATACTATTAGCATCTGAAATCCATAAAATGAACATTTTTCAAGA GGAATGCTATGACAAATCCAAAAATAAACAATGTGGTGGATAGACCTAAGCAGAGATAATTCTT TGCTCACAACATAGCCATTTATGTTAAGCACATAAATATTGATGAAAAATACTAAGAGCATTCT ACAGCCAAATAAGTTGCAAGAATACTGAGTCCAGAAGATAACAGAAATTTTATATGTAAACCAT AAAATGGAAATGGATGGAGTTACTCTCTCCATTATTCTTTTATGTTGTTTTAACTTCCAAGAAA AAGATCAAGGGGCTAACAATCTAGTTTTAACATGTCTACCCTCTCGGATGCTATTTGCTCCAAT TAATAGCCCCTGGCCATTCCACTCATTCAATTAAAGATCAAATTTCTAATGACTTTCAATATGT GCTATTTCGGAAATACTACCTAAAATTCCTAAATGACGTCTGTTTGAGAGCAATAGGAGGTTTC AACAAAATCTAAAAAAGAACGAAGGAAATGATATATCAATGATGGAAAATGAACTGTTTTAGAT AATGTGGTAATAAAAAATGGTTTTCAAAGACTAATAGAATGGGAAAGAAATGAAAGTTGGTTCC AGGGCTTGATAAACAAGGGGAATTTATTTAGAGTTGATTCAAAAAGTTAGTCCAGTGATCAAAC AATTATTTAAGTAACTGCATCTTCATAAGCAATACGCCTTTGAAAATGAAATGTCCGTTCCATT TCTAATGGTTCAATACTTCAATTTGAATTATCCCAACAGGGACAGATTTCACCACTCCAGCAGC CCAAAAGCAACAAACCTGTAACAAAGGTGTGTTGAAGAACAACTCTTTTAGGTGCTCCAGTGCT GTAAGGAAACAGTTGAGATGAGATCGCCAAACCAACCACTGTAACTTGTAACAAGCCATGGAGG ATGGAGGTTTTGGCCAGCCATCGACTAGCAATAGGTGTTACTGGACCAAAACACCATCCCACGA CCAATCCAATTACTGACCCAACAATGACATCAGCTACAAAATATCCTGCAAGAAGAATATTATA ATCATGCTGTCGTTAGTTAATAATAATTGATTTTAGTTGTCCATGATATCCATCTATATAGCAT GGCAAATGGGCAACACTTAATTCAAGTTTTTAACATCAGCTAAAGTTCCAATACCATTAAAGTA AACCAGTAGGCAGCCATCTAACCAATTCATGCAAATATCATATTGCCTAGCTTAGCCACACTGT CTGAATGCCATAAGTAGGTCAAGAAATTCAAACTGAAATCACAAACAAGGAAGGGTACAAACCG TATGGTTTTGGGAGAGATCCCATCATTCCCATCTTCTCAATCAAGAACTGGATAAGGAAACCAC CATAGTAAAGACAATAAAGGAGACATGGGATCATAGGTACCACATAACCAACCAACAACCTGTA CATCATTAGTTCAAGCATTAATAATTGGATAAGTTGAGAAATAAATTACAGTGTAAGTTGAACA TATACACAACATCTAACCTATGCTTTCTGTGCTTGATTCATGTAAAAAGATTAACCGGAGGTGC ACACATGGGTCCATATGCTGTTTTATGAGACTAATCTGACCACACTATGCAACATGGGCTACAT TGGCGCCCCCCCTAATGGGCTGAGGTATTATATTTGGTCTACAACTATCAATAATTACAAAGTG GGTCATGTGCTAATCGATTTTTTTTTAAAAAAAAAAAAGCTATTTCAAGTCTATTTGACAAGTT CTTCAGAACCAATCAAGCAACTCCGCTCACCATCAATCTTCAGGATTGACATGTTCCTAGAAAG CTTCAGGACGGAGAAAAGAAGTCCTAGACATCATTGACTTCGGAACCACCTACAGTCCTATTAT AGGTAACCCTACTGTACCAAAGCCCATGACTCTTCATAAAACAAATCATGATGAGTGGCTAAAT CCTTTTTATGGCATTTCGTTTCAAGAAAACTGCATGCCAGCTAGGCTAGTGCTATTCTTATTTT CAAGTATTCAGTTACGATGCAATGATGCATTAACACAAATTCAAATAAGATTAACATCTGTCCC AAAAAGAGTTCACATTTCTACACGAATCCGGGCACCCACTTGTCGAGATTCTGTAGAAAAATAA ACTCTTTTTGGGACAGAGGTAGCACGTATGATTGATGCTGCCGTGTTATGATGAAGTAAAGATA CAGAAACCTCTAGGACTATTTACATTTCTATTGTGATAAACATAACAAGTCAATTAAGAGTCAA TCAGTGTAAGATAGCATGGTTACTTTGGTGATTGTTTGTTCCAATGTTTCCAACTAATGCTACA GATAAAACGCCCAAGAAGCATCGACATGGAAATGAAGAATGTTAGAAAACCTCCACTCAGGCCA GCTAGCATGTAAACCTGCACAAAACCAAAATAGCCTAAGCACAAAGCAAGCATACCCAGGAAAC TAATTGATACAAAATAATGTGCAGAAAAAAAAAAGCAGAAGTTAAAATATATATGACAAAAGCG ATTAAATTTGAGTATGTAAAATTGTGGCCTTTTCATGTATATTCATGGCTGAACTGATGTGGCT ATATACATGAAGAATATTATGATTTTTTATATCACTTCAAACGTGAGACTGATTTACCATACAA GAAAATGTTGTGTAACAGTGCTATGTAAGCATATAAGGAGGCAAAAGATGTTCAGAACTTACCA AAGTTATTAAGGAATAGAGCCCGAAAGCACCCCAAAAATGTGCTTGCTCTGATAATCCCTAGAA TTGAACAAACAATTATAAAAATATTAGTCTCTTACATTACAGTTTCACTGGATGCAAAACAAAC AGATATAAACAAAGGGAATACACCGCGAATTTTCTATTGGAACAAATATTGCATATAAATCCAT ATAGCTGAACCCTTTCTTTATATTCTCAAAAGAAACGTAACTTCCAAAACTACTACATTTTCAA TCATGCAGAAAAGAATGGGAAATTAATAACAATGGGCACTTGACTACTTGCAATGAATAAGAAA AAAAATTACCCATATAATCCTCGGGATAAATAGACCAGCTAATGAAGTTGGAACAAACATAAGG AATGCCAAATAAGGGTGAGCAAAC |