Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0846400_circ_g.8 |
ID in PlantcircBase | osa_circ_022699 |
Alias | Os_ciR9010 |
Organism | Oryza sativa |
Position | chr3: 35594494-35594618 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Os03g0846400 |
Parent gene annotation |
Peptidase, trypsin-like serine and cysteine domain containing pr otein. (Os03t0846400-01) |
Parent gene strand | + |
Alternative splicing | Os03g0846400_circ_g.1 Os03g0846400_circ_g.2 Os03g0846400_circ_g.3 Os03g0846400_circ_g.4 Os03g0846400_circ_g.5 Os03g0846400_circ_g.6 Os03g0846400_circ_g.7 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os03t0846400-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.167441667 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
35594516-35594564(-) |
Potential amino acid sequence |
MRKISFLPQVFINLVSVTRLCNQAR*(-) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |