Plant Circular RNA Database

Detail information of Os07g0570100_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os07g0570100_circ_g.3
					
						ID in PlantcircBase
						osa_circ_034406
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 22943577-22948068  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os07g0570100						
					
						Parent gene annotation
						
							Similar to predicted protein. (Os07t0570100-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0570100_circ_ag.1 Os07g0570100_circ_ag.2 Os07g0570100_circ_ag.3 Os07g0570100_circ_ag.4 Os07g0570100_circ_ag.5 Os07g0570100_circ_ag.6 Os07g0570100_circ_ag.7 Os07g0570100_circ_g.1 Os07g0570100_circ_ag.2 Os07g0570100_circ_ag.4 Os07g0570100_circ_g.5 Os07g0570100_circ_ag.6 Os07g0570100_circ_ag.7 Os07g0570100_circ_ag.8 Os07g0570100_circ_ag.9 Os07g0570100_circ_ag.10 Os07g0570100_circ_ag.11 Os07g0570100_circ_ag.12 Os07g0570100_circ_ag.13 Os07g0570300_circ_ag.1 Os07g0570300_circ_g.1 Os07g0570300_circ_g.2 Os07g0570300_circ_ag.3 Os07g0570300_circ_g.4 Os07g0570300_circ_g.5 Os07g0570300_circ_g.6 Os07g0570300_circ_ag.7 Os07g0570300_circ_g.8 Os07g0570300_circ_g.9 Os07g0570300_circ_ag.10 Os07g0570300_circ_ag.11 Os07g0570300_circ_g.12 Os07g0570300_circ_ag.13 Os07g0570300_circ_ag.14 Os07g0570300_circ_g.15 Os07g0570300_circ_ag.16 Os07g0570300_circ_ag.17 Os07g0570500_circ_g.1 Os07g0570500_circ_g.2 Os07g0570500_circ_g.3 Os07g0570500_circ_g.4 Os07g0570500_circ_g.5 Os07g0570500_circ_g.6 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0570100-01:7

General Information
CircRNA Name	Os07g0570100_circ_g.3
ID in PlantcircBase	osa_circ_034406
Alias	NA
Organism	Oryza sativa
Position	chr7: 22943577-22948068 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os07g0570100
Parent gene annotation	Similar to predicted protein. (Os07t0570100-01)
Parent gene strand	-
Alternative splicing	Os07g0570100_circ_ag.1 Os07g0570100_circ_ag.2 Os07g0570100_circ_ag.3 Os07g0570100_circ_ag.4 Os07g0570100_circ_ag.5 Os07g0570100_circ_ag.6 Os07g0570100_circ_ag.7 Os07g0570100_circ_g.1 Os07g0570100_circ_ag.2 Os07g0570100_circ_ag.4 Os07g0570100_circ_g.5 Os07g0570100_circ_ag.6 Os07g0570100_circ_ag.7 Os07g0570100_circ_ag.8 Os07g0570100_circ_ag.9 Os07g0570100_circ_ag.10 Os07g0570100_circ_ag.11 Os07g0570100_circ_ag.12 Os07g0570100_circ_ag.13 Os07g0570300_circ_ag.1 Os07g0570300_circ_g.1 Os07g0570300_circ_g.2 Os07g0570300_circ_ag.3 Os07g0570300_circ_g.4 Os07g0570300_circ_g.5 Os07g0570300_circ_g.6 Os07g0570300_circ_ag.7 Os07g0570300_circ_g.8 Os07g0570300_circ_g.9 Os07g0570300_circ_ag.10 Os07g0570300_circ_ag.11 Os07g0570300_circ_g.12 Os07g0570300_circ_ag.13 Os07g0570300_circ_ag.14 Os07g0570300_circ_g.15 Os07g0570300_circ_ag.16 Os07g0570300_circ_ag.17 Os07g0570500_circ_g.1 Os07g0570500_circ_g.2 Os07g0570500_circ_g.3 Os07g0570500_circ_g.4 Os07g0570500_circ_g.5 Os07g0570500_circ_g.6
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0570100-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: ATGTTCTTCACACCCAAGGC
 R: GCGGAAAGATCTGCATGTTTG
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: ATGTTCTTCACACCCAAGGC R: GCGGAAAGATCTGCATGTTTG PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACTCACCATAGCCTACATCTGTGAGCTGTATAACAACATTGAAGAATGAAAACTCATAACTCC
AGTCACCTTCCCATGCATACAAACTCATAGCCCATCcaaaatcattcaaataatccattatcaa
cctcgtgaacatatcagtaagaactgtcgattcaggagagctattggacagtggacagtggaaa
tccatctt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 759
Transcript exons: 22943577-22943766,22943839-22943934,22944021-22944123,22
945027-22945130,22946863-22946949,22947612-22947697,2294
7976-22948068
CAAAATCATTCAAATAATCCATTATCAACCTCGTGAACATATCAGTAAGAACTGTCGATTCAGG
AGAGCTATTGGACAGTGGACAGTGGAAATCCATCTTGACGTAGGCCTTGGGTGTGAAGAACATT
GTATCAGGCTTATACCATACTCTTGAAAACATTGTTTTCCTAAGCATACAAGGAAAACTTCCCT
TTTCCTCAACATTTTTCAATGAAAGATCACTTGGAATGAAGATATTAGGTTTTGGAATGTGCAA
ATCTTCCATGGGAGCCATATTTACCCATTTCTGTATGATGGAAGGAGTGACTGCTTCAACTGAA
TATGATGTACCATACCAAGGCTCTGTTAAGTTTGTTTGCCCTTCAAACTTTTTTGATTCCCAGA
ATATTCTAACATTATCTGGAGTCAAGTCATTTAATATATTCTGAATAGCATCTGGAGAAAACTT
TGATGGCACAGATGATGCAATCAGCCAATCTTCCGGCGGAAAGATCTGCATGTTTGAGGAAATA
TTGACAACATAATGGATAGGAGGACTCTTGTCTCGGTAGTGGAATCCCATCTCAGAAATAGCTA
CAAGCTCATCAAAAATCCACTGACGAGTTCCAGAGGTCTGGAGCAATGCTATGTATCGGAATAA
CAGTCCAATAATGTCCTCCATGTGCTCATAGCCTACATCTGTGAGCTGTATAACAACATTGAAG
AATGAAAACTCATAACTCCAGTCACCTTCCCATGCATACAAACTCATAGCCCATC
						
					

						Genomic sequence
						
							CAAAATCATTCAAATAATCCATTATCAACCTCGTGAACATATCAGTAAGAACTGTCGATTCAGG
AGAGCTATTGGACAGTGGACAGTGGAAATCCATCTTGACGTAGGCCTTGGGTGTGAAGAACATT
GTATCAGGCTTATACCATACTCTTGAAAACATTGTTTTCCTAAGCATACAAGGAAAACTTCCCT
GGATAAACCGAAAATATCAATAAAGTTTCACAAAATAAAATTATGAGCATTTTTTTTTAATAAA
AAATACCTTTTCCTCAACATTTTTCAATGAAAGATCACTTGGAATGAAGATATTAGGTTTTGGA
ATGTGCAAATCTTCCATGGGAGCCATATTTACCCATTTCTGTACAAATTATGTTAGAAATGTGT
ACAATTCCAAATATATTAAATTGGAGAATATGATAGGAACAGTAACATCCAAATGTACACCTGT
ATGATGGAAGGAGTGACTGCTTCAACTGAATATGATGTACCATACCAAGGCTCTGTTAAGTTTG
TTTGCCCTTCAAACTTTTTTGATTCCCAGAATATTCTGAAGGAGATGAAGAAGATAACCCAGAA
GTATTAACACCCGTAAGTAAAAGTCACAATGAAAATAAAATCTAAACAAACAGATCAAGTGTGT
GAAAGGAAAAAATAAAGCAAATGGCCATAAGAGGATCAACGATGAGTGAGGAGCCTGTTGCTGC
TTTTTGGAAGTTAACAATAAAAAAAATGCAAAGGGACAAGTAATGAAATTTCTTCCGCTTTCTC
TGAGAAAAAAAGCTCAAATTTATGAAAAGTAGTGAAAGTTCTCTTGGCTGTGCCATCCTTCTAG
AAGAGCACTATAGTGTTTTATAATTGATTAGGCCAAGAGGAGTGTGAAGCGACAGCTAAATGCA
AAGACCGATCATTTTCCAAACTACATGCAGTAGTTGAAGAGTCACAATAATAAGCATATGCATA
CATTATACTGTTATTGCTGAAATGAACAACCAACTCAAATTGGCTAGTCCCCAATTCTGTATGA
TAACATTAAATGCATGAGATTACTGTCGTGAATAGAATACACATTGTTGTATCTTTGCAGTCTC
ATACTGATCCGAAATTTTCCATTCGAAATTGTGGGATACAAGATGTGCTGGAAGTGCTCCTGAA
AAATCCTAGGAATCATGTCTAACCTAAGTGTACGGGAAGAAGCATATGAAGATTTTACAATGTG
GTACATGAACCATTCAAGGCATCAAAGATATGTAGCACAAATGAATTAATATAGATATGAGTTT
CCTAAGAAAGTAACTTTTGAAATACTCCAAAAAAGAGAGTATAATACATAAAATATAACTTTTC
AACAAACATGTGCTGAATATTAAAACATAAAAAACTATGACTAAACCTTAAAACAGAACAGGAA
AACCCAACAAGGCCATATGGCCTGGATGTACTCAAAACCTACCTAACATTATCTGGAGTCAAGT
CATTTAATATATTCTGAATAGCATCTGGAGAAAACTTTGATGGCACAGATGATGCAATCAGCCA
ATCTTCCGGCGGAAAGATCTATAATAGAGAGAGATCATGAGATGGTGATACTGAGCAGAATTAA
TTTGCAATTTATGAACAAACATTTTGGCATAATTTATTAGGAGGAACTGATCATTTCATTGTTC
AATGAAATATCATGAGCTGGCCTTCTTGTTAATTTCATTTTGTGTAACGAAACAAAGTAGCCTA
CAAACATAAGTTAAGAAAAGCTAAACAGTTTTTAGATATGCCACTCCACTTCCTCCCAGTCATA
CGCATGTGAATCTATGGGGAATGCAGATCCGCTCATGTAGAAAGCTTCAATTTTGTGAATTTGG
CGATATTCTGTTCAAATTTGACTAAAATTTGTTCAAAATTTTGGTATATCAGCACCCTCCAATA
GAAACGTCCAAACCTAAAGATTAAACCCTGGGGGGGGGGTGCATATGCAAAAATTTCAGTCTTT
TGGGCCTCTGAAAACTCGGATATTTTGGTCAAACTACAACAGGAAGCATGAAAGGATCATAACC
TACACAGAAGCCTAGAGCCTCATTAGTGGAACTATGCCCCACTGCATCCTTGCTGACAGGATCA
CGTTTTCTCTCAGGGAAGTGTTATGGTAGATGTGACTATCACCTCCAAATTTATCGATATCATT
CACTCATAAATTAAGAGGCAACCCATATAATATGTCACATTTAGTACACAAGCCCAGCAAAAAA
CATTTAGTACACAAATACATTGTAATATATCTAATACTCTCACACCCTTCTTGAAATTTGTGTG
GAGGTTGCCTCTTGATTTAGGGGTAGCTCATCATCTCTCTCCTCACTTATCTCCACCATCTCAT
CACTTAATCCAATGTGGCACTCTTAGGGGCAGCATATGGAGCATTATAGTACTTGCCCTCAGCG
ACTTCTCCCTCCTCACCGTGATCCAACTTACCGCTAGTCGCTAGAGAGTACAAGTATCTAATGG
CTATGACTAGAGATTGCCAAGCTGATCCAGGCATTACCACATTGGTCTCTTACCCCTAGAAGCC
ACATTAATCACCTTGACACATAAGACAGTCGTGCAACATGGAGTCAGTGACAAATTGCAGAAAG
AAGGGAGTTATCTGGTGGCATATAGTTCATATTCTCACTTCATTTGTGAGGGATCCCACCTAAT
CACATCCCTATGAATTCAACCGAGTCTTATCCAACAACTCATAGGAGTATCAAGTTACAAGGTT
TTAAAGTAGCACAGCAATATAGTTTTGCACTAGATTCTCTCATACAAACATGTCACTGACAAAA
TATAATAATAAGGTGCAGATTGATAGTAGAATTAATGACTGGTCATTCTTGACTTTTGCATGAG
CACTTTCATGCCTTATCAAAAGTCACATCTGTCTAATCAGAAAATAGTTAGGTAGTAAGATTTT
AAAAAGTCACTTTCTTTTATAAGCAAAGAGAAGTCTGCTTTCTGCCCTCGATTCAAACTTTTAT
GAGAAACAGAGATGGAATACTGTTTCTCGTAAAAAAAAAAGATGGAATACTGTGATACCACCAC
CTATCAGGCCCGACGAGCGGTCCACTGTATAGGAAAATGGGCAACAATGGGACTCCTAACTCTT
TCTTGAACATGCAGGAACAGTCAATTGCAATTAAAACAGATGCTATTATTGCTAACTTCCTTTT
AAAATGATGACAAGACATGATAAAGATTATTAGTTGGCAATTATGGACATGCAATACAGATGCC
CAAAGCAATGACTAAAATATACCTGCATGTTTGAGGAAATATTGACAACATAATGGATAGGAGG
ACTCTTGTCTCGGTAGTGGAATCCCATCTCAGAAATAGCTACAAGCTTGACAATCAAAACAGAG
TGAGGTAGTTAGCTGTGTGCAATGCTAAATGGACTTCATGTGCATCATTACAATTTACAATGTC
GCAAAAACACATAGACACTGTCATTATCGTTCACCAGTTAGACAATTATACAAATTCCAAGCAT
TACTATAGTAGTTGGACAAAATAGAATTTGAAGGAAGCACGCAAAAACAATGTGACCCTTTGAC
AAGCATTACTGTAGTAGTTGGACAAAATAGACCCTTTGAAGGAACCTAATGCATGCAGCGTACA
CAAAAACAATGTGAGCAACTTGATGATATGGTCACATACTCATGTTTCATGATTCATCTTGAAA
AGGTAAAGTATAATTAAATTTAAATATTAAATAGTAGCTCCCTAAAATGCCATTTATAGAGGGA
TATTGGGTGATAAGAAAAGGTACTGGTCAAATTACGACAAATTAGACCAAAGATCTTATGTACA
ATCCTGACCAAAACAATAATCCAATTTAATGACTTCATTAATGGCCTGATTGTTTAAATTTCGA
AGTAGCGGTATCAGCCCAAGAAAAATTTGCAAAGCTTAAACGGATGTCACGTACAGCTTACAGT
TGATTTTGGTCATTATAAAAAAAAAATCTATTCCCAAAAGGTACACAAATCCAAAACCAAAATT
CACCTCATCAAAAATCCACTGACGAGTTCCAGAGGTCTGGAGCAATGCTATGTATCGGAATAAC
AGTCCAATAATGTCCTCCATGTGCTCTATCATCAATGATATGAAATAGGTAAATATTATATACA
CTGTAAATCTTCAGTACTTAAAAGTAAAATTTGATCTTCCATCAAAAAATAGTAAAGTTTGATC
ATATACTATCCACTTAGATTGAAATTAAGGATTTACCCTCCTGACTCTCATGTGAGTGACCTTG
ATTACCCCACGTCTTTTTTTTATGCAAGAGATTACCCCACATGTCATTGGCACAGGAGGGTAAA
TCCTCAAAAAATTGTTGTTAAAAAGGCCCTTCTTGAATGAAACTCACCATAGCCTACATCTGTG
AGCTGTATAACAACATTGAAGAATGAAAACTCATAACTCCAGTCACCTTCCCATGCATACAAAC
TCATAGCCCATC
						
					

			
		

Sequences
Splice junction sequence	AACTCACCATAGCCTACATCTGTGAGCTGTATAACAACATTGAAGAATGAAAACTCATAACTCC AGTCACCTTCCCATGCATACAAACTCATAGCCCATCcaaaatcattcaaataatccattatcaa cctcgtgaacatatcagtaagaactgtcgattcaggagagctattggacagtggacagtggaaa tccatctt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 759 Transcript exons: 22943577-22943766,22943839-22943934,22944021-22944123,22 945027-22945130,22946863-22946949,22947612-22947697,2294 7976-22948068 CAAAATCATTCAAATAATCCATTATCAACCTCGTGAACATATCAGTAAGAACTGTCGATTCAGG AGAGCTATTGGACAGTGGACAGTGGAAATCCATCTTGACGTAGGCCTTGGGTGTGAAGAACATT GTATCAGGCTTATACCATACTCTTGAAAACATTGTTTTCCTAAGCATACAAGGAAAACTTCCCT TTTCCTCAACATTTTTCAATGAAAGATCACTTGGAATGAAGATATTAGGTTTTGGAATGTGCAA ATCTTCCATGGGAGCCATATTTACCCATTTCTGTATGATGGAAGGAGTGACTGCTTCAACTGAA TATGATGTACCATACCAAGGCTCTGTTAAGTTTGTTTGCCCTTCAAACTTTTTTGATTCCCAGA ATATTCTAACATTATCTGGAGTCAAGTCATTTAATATATTCTGAATAGCATCTGGAGAAAACTT TGATGGCACAGATGATGCAATCAGCCAATCTTCCGGCGGAAAGATCTGCATGTTTGAGGAAATA TTGACAACATAATGGATAGGAGGACTCTTGTCTCGGTAGTGGAATCCCATCTCAGAAATAGCTA CAAGCTCATCAAAAATCCACTGACGAGTTCCAGAGGTCTGGAGCAATGCTATGTATCGGAATAA CAGTCCAATAATGTCCTCCATGTGCTCATAGCCTACATCTGTGAGCTGTATAACAACATTGAAG AATGAAAACTCATAACTCCAGTCACCTTCCCATGCATACAAACTCATAGCCCATC
Genomic sequence	CAAAATCATTCAAATAATCCATTATCAACCTCGTGAACATATCAGTAAGAACTGTCGATTCAGG AGAGCTATTGGACAGTGGACAGTGGAAATCCATCTTGACGTAGGCCTTGGGTGTGAAGAACATT GTATCAGGCTTATACCATACTCTTGAAAACATTGTTTTCCTAAGCATACAAGGAAAACTTCCCT GGATAAACCGAAAATATCAATAAAGTTTCACAAAATAAAATTATGAGCATTTTTTTTTAATAAA AAATACCTTTTCCTCAACATTTTTCAATGAAAGATCACTTGGAATGAAGATATTAGGTTTTGGA ATGTGCAAATCTTCCATGGGAGCCATATTTACCCATTTCTGTACAAATTATGTTAGAAATGTGT ACAATTCCAAATATATTAAATTGGAGAATATGATAGGAACAGTAACATCCAAATGTACACCTGT ATGATGGAAGGAGTGACTGCTTCAACTGAATATGATGTACCATACCAAGGCTCTGTTAAGTTTG TTTGCCCTTCAAACTTTTTTGATTCCCAGAATATTCTGAAGGAGATGAAGAAGATAACCCAGAA GTATTAACACCCGTAAGTAAAAGTCACAATGAAAATAAAATCTAAACAAACAGATCAAGTGTGT GAAAGGAAAAAATAAAGCAAATGGCCATAAGAGGATCAACGATGAGTGAGGAGCCTGTTGCTGC TTTTTGGAAGTTAACAATAAAAAAAATGCAAAGGGACAAGTAATGAAATTTCTTCCGCTTTCTC TGAGAAAAAAAGCTCAAATTTATGAAAAGTAGTGAAAGTTCTCTTGGCTGTGCCATCCTTCTAG AAGAGCACTATAGTGTTTTATAATTGATTAGGCCAAGAGGAGTGTGAAGCGACAGCTAAATGCA AAGACCGATCATTTTCCAAACTACATGCAGTAGTTGAAGAGTCACAATAATAAGCATATGCATA CATTATACTGTTATTGCTGAAATGAACAACCAACTCAAATTGGCTAGTCCCCAATTCTGTATGA TAACATTAAATGCATGAGATTACTGTCGTGAATAGAATACACATTGTTGTATCTTTGCAGTCTC ATACTGATCCGAAATTTTCCATTCGAAATTGTGGGATACAAGATGTGCTGGAAGTGCTCCTGAA AAATCCTAGGAATCATGTCTAACCTAAGTGTACGGGAAGAAGCATATGAAGATTTTACAATGTG GTACATGAACCATTCAAGGCATCAAAGATATGTAGCACAAATGAATTAATATAGATATGAGTTT CCTAAGAAAGTAACTTTTGAAATACTCCAAAAAAGAGAGTATAATACATAAAATATAACTTTTC AACAAACATGTGCTGAATATTAAAACATAAAAAACTATGACTAAACCTTAAAACAGAACAGGAA AACCCAACAAGGCCATATGGCCTGGATGTACTCAAAACCTACCTAACATTATCTGGAGTCAAGT CATTTAATATATTCTGAATAGCATCTGGAGAAAACTTTGATGGCACAGATGATGCAATCAGCCA ATCTTCCGGCGGAAAGATCTATAATAGAGAGAGATCATGAGATGGTGATACTGAGCAGAATTAA TTTGCAATTTATGAACAAACATTTTGGCATAATTTATTAGGAGGAACTGATCATTTCATTGTTC AATGAAATATCATGAGCTGGCCTTCTTGTTAATTTCATTTTGTGTAACGAAACAAAGTAGCCTA CAAACATAAGTTAAGAAAAGCTAAACAGTTTTTAGATATGCCACTCCACTTCCTCCCAGTCATA CGCATGTGAATCTATGGGGAATGCAGATCCGCTCATGTAGAAAGCTTCAATTTTGTGAATTTGG CGATATTCTGTTCAAATTTGACTAAAATTTGTTCAAAATTTTGGTATATCAGCACCCTCCAATA GAAACGTCCAAACCTAAAGATTAAACCCTGGGGGGGGGGTGCATATGCAAAAATTTCAGTCTTT TGGGCCTCTGAAAACTCGGATATTTTGGTCAAACTACAACAGGAAGCATGAAAGGATCATAACC TACACAGAAGCCTAGAGCCTCATTAGTGGAACTATGCCCCACTGCATCCTTGCTGACAGGATCA CGTTTTCTCTCAGGGAAGTGTTATGGTAGATGTGACTATCACCTCCAAATTTATCGATATCATT CACTCATAAATTAAGAGGCAACCCATATAATATGTCACATTTAGTACACAAGCCCAGCAAAAAA CATTTAGTACACAAATACATTGTAATATATCTAATACTCTCACACCCTTCTTGAAATTTGTGTG GAGGTTGCCTCTTGATTTAGGGGTAGCTCATCATCTCTCTCCTCACTTATCTCCACCATCTCAT CACTTAATCCAATGTGGCACTCTTAGGGGCAGCATATGGAGCATTATAGTACTTGCCCTCAGCG ACTTCTCCCTCCTCACCGTGATCCAACTTACCGCTAGTCGCTAGAGAGTACAAGTATCTAATGG CTATGACTAGAGATTGCCAAGCTGATCCAGGCATTACCACATTGGTCTCTTACCCCTAGAAGCC ACATTAATCACCTTGACACATAAGACAGTCGTGCAACATGGAGTCAGTGACAAATTGCAGAAAG AAGGGAGTTATCTGGTGGCATATAGTTCATATTCTCACTTCATTTGTGAGGGATCCCACCTAAT CACATCCCTATGAATTCAACCGAGTCTTATCCAACAACTCATAGGAGTATCAAGTTACAAGGTT TTAAAGTAGCACAGCAATATAGTTTTGCACTAGATTCTCTCATACAAACATGTCACTGACAAAA TATAATAATAAGGTGCAGATTGATAGTAGAATTAATGACTGGTCATTCTTGACTTTTGCATGAG CACTTTCATGCCTTATCAAAAGTCACATCTGTCTAATCAGAAAATAGTTAGGTAGTAAGATTTT AAAAAGTCACTTTCTTTTATAAGCAAAGAGAAGTCTGCTTTCTGCCCTCGATTCAAACTTTTAT GAGAAACAGAGATGGAATACTGTTTCTCGTAAAAAAAAAAGATGGAATACTGTGATACCACCAC CTATCAGGCCCGACGAGCGGTCCACTGTATAGGAAAATGGGCAACAATGGGACTCCTAACTCTT TCTTGAACATGCAGGAACAGTCAATTGCAATTAAAACAGATGCTATTATTGCTAACTTCCTTTT AAAATGATGACAAGACATGATAAAGATTATTAGTTGGCAATTATGGACATGCAATACAGATGCC CAAAGCAATGACTAAAATATACCTGCATGTTTGAGGAAATATTGACAACATAATGGATAGGAGG ACTCTTGTCTCGGTAGTGGAATCCCATCTCAGAAATAGCTACAAGCTTGACAATCAAAACAGAG TGAGGTAGTTAGCTGTGTGCAATGCTAAATGGACTTCATGTGCATCATTACAATTTACAATGTC GCAAAAACACATAGACACTGTCATTATCGTTCACCAGTTAGACAATTATACAAATTCCAAGCAT TACTATAGTAGTTGGACAAAATAGAATTTGAAGGAAGCACGCAAAAACAATGTGACCCTTTGAC AAGCATTACTGTAGTAGTTGGACAAAATAGACCCTTTGAAGGAACCTAATGCATGCAGCGTACA CAAAAACAATGTGAGCAACTTGATGATATGGTCACATACTCATGTTTCATGATTCATCTTGAAA AGGTAAAGTATAATTAAATTTAAATATTAAATAGTAGCTCCCTAAAATGCCATTTATAGAGGGA TATTGGGTGATAAGAAAAGGTACTGGTCAAATTACGACAAATTAGACCAAAGATCTTATGTACA ATCCTGACCAAAACAATAATCCAATTTAATGACTTCATTAATGGCCTGATTGTTTAAATTTCGA AGTAGCGGTATCAGCCCAAGAAAAATTTGCAAAGCTTAAACGGATGTCACGTACAGCTTACAGT TGATTTTGGTCATTATAAAAAAAAAATCTATTCCCAAAAGGTACACAAATCCAAAACCAAAATT CACCTCATCAAAAATCCACTGACGAGTTCCAGAGGTCTGGAGCAATGCTATGTATCGGAATAAC AGTCCAATAATGTCCTCCATGTGCTCTATCATCAATGATATGAAATAGGTAAATATTATATACA CTGTAAATCTTCAGTACTTAAAAGTAAAATTTGATCTTCCATCAAAAAATAGTAAAGTTTGATC ATATACTATCCACTTAGATTGAAATTAAGGATTTACCCTCCTGACTCTCATGTGAGTGACCTTG ATTACCCCACGTCTTTTTTTTATGCAAGAGATTACCCCACATGTCATTGGCACAGGAGGGTAAA TCCTCAAAAAATTGTTGTTAAAAAGGCCCTTCTTGAATGAAACTCACCATAGCCTACATCTGTG AGCTGTATAACAACATTGAAGAATGAAAACTCATAACTCCAGTCACCTTCCCATGCATACAAAC TCATAGCCCATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_017232 						
					
						PMCS
						0.206978809

Conservation Information
Conserved circRNAs	osi_circ_017232
PMCS	0.206978809

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22948062-22943579(-)
						
						Potential amino acid sequence
						
							MSLYAWEGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEM
GFHYRDKSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKK
FEGQTNLTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPC
MLRKTMFSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSL
YAWEGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFH
YRDKSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEG
QTNLTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLR
KTMFSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSLYAW
EGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFHYRD
KSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEGQTN
LTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLRKTM
FSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSLYAWEGD
WSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFHYRDKSP
PIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEGQTNLTE
PWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLRKTMFSR
VWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDF(-)
						
						Sponge-miRNAs
						
							osa-miR2871b-3p 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	22948062-22943579(-)
Potential amino acid sequence	MSLYAWEGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEM GFHYRDKSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKK FEGQTNLTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPC MLRKTMFSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSL YAWEGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFH YRDKSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEG QTNLTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLR KTMFSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSLYAW EGDWSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFHYRD KSPPIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEGQTN LTEPWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLRKTM FSRVWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDFGWAMSLYAWEGD WSYEFSFFNVVIQLTDVGYEHMEDIIGLLFRYIALLQTSGTRQWIFDELVAISEMGFHYRDKSP PIHYVVNISSNMQIFPPEDWLIASSVPSKFSPDAIQNILNDLTPDNVRIFWESKKFEGQTNLTE PWYGTSYSVEAVTPSIIQKWVNMAPMEDLHIPKPNIFIPSDLSLKNVEEKGSFPCMLRKTMFSR VWYKPDTMFFTPKAYVKMDFHCPLSNSSPESTVLTDMFTRLIMDYLNDF(-)
Sponge-miRNAs	osa-miR2871b-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os07g0570100_circ_g.3

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