Plant Circular RNA Database

Detail information of Os10g0501000_circ_ag.1

			
						 General Information
					
						CircRNA Name
						Os10g0501000_circ_ag.1
					
						ID in PlantcircBase
						osa_circ_007495
					
						Alias
						Os_ciR3289
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 19104518-19109362  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							EPlOSAG00000049343_circ_igg.1 EPlOSAG00000049343_circ_igg.2 EPlOSAG00000010307_circ_g.1 EPlOSAG00000049343_circ_g.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_igg.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_g.52 EPlOSAG00000049343_circ_g.53 EPlOSAG00000049343_circ_g.54 EPlOSAG00000049343_circ_g.55 EPlOSAG00000049343_circ_g.56 EPlOSAG00000049343_circ_g.57 EPlOSAG00000049343_circ_g.58 EPlOSAG00000049343_circ_g.59 EPlOSAG00000049343_circ_g.60 EPlOSAG00000049343_circ_g.61 EPlOSAG00000049343_circ_g.62 EPlOSAG00000049343_circ_g.63 EPlOSAG00000049343_circ_g.64 EPlOSAG00000049343_circ_g.65 EPlOSAG00000049343_circ_g.66 EPlOSAG00000049343_circ_g.67 EPlOSAG00000049343_circ_g.68 EPlOSAG00000049343_circ_g.69 EPlOSAG00000049343_circ_g.70 EPlOSAG00000049343_circ_g.71 EPlOSAG00000049343_circ_g.72 EPlOSAG00000049343_circ_g.73 EPlOSAG00000049343_circ_g.74 EPlOSAG00000049343_circ_g.75 EPlOSAG00000049343_circ_g.76 EPlOSAG00000049343_circ_g.77 EPlOSAG00000049343_circ_g.78 EPlOSAG00000049343_circ_g.79 EPlOSAG00000049343_circ_g.80 EPlOSAG00000049343_circ_g.81 EPlOSAG00000049343_circ_g.82 EPlOSAG00000049343_circ_g.83 EPlOSAG00000049343_circ_ag.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_g.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_igg.52 Os10g0499600_circ_g.1 Os10g0499600_circ_g.2 Os10g0500300_circ_g.1 Os10g0500300_circ_g.2 Os10g0500600_circ_g.1 Os10g0500600_circ_g.2 Os10g0500700_circ_g.1 Os10g0500700_circ_g.2 Os10g0500700_circ_g.3 Os10g0500700_circ_g.4 Os10g0500700_circ_g.5 Os10g0500700_circ_g.6 Os10g0500700_circ_g.7 Os10g0500700_circ_g.8 Os10g0501500_circ_g.1 Os10g0501500_circ_g.2 EPlOSAG00000049332_circ_g.1 EPlOSAG00000049332_circ_g.2 EPlOSAG00000049332_circ_g.3 EPlOSAG00000049332_circ_g.4 EPlOSAG00000049332_circ_g.5 EPlOSAG00000049332_circ_g.6 EPlOSAG00000049332_circ_g.7 EPlOSAG00000049332_circ_g.8 EPlOSAG00000049332_circ_g.9 EPlOSAG00000049332_circ_g.10 EPlOSAG00000049332_circ_g.11 EPlOSAG00000049332_circ_g.12 EPlOSAG00000049332_circ_g.13 EPlOSAG00000049332_circ_g.14 EPlOSAG00000049332_circ_g.15 EPlOSAG00000049332_circ_g.16 EPlOSAG00000049332_circ_g.17 EPlOSAG00000049332_circ_g.18 EPlOSAG00000049332_circ_g.19 EPlOSAG00000049332_circ_g.20 EPlOSAG00000049332_circ_g.21 EPlOSAG00000049332_circ_g.22 EPlOSAG00000049332_circ_g.23 EPlOSAG00000049332_circ_g.24 EPlOSAG00000049332_circ_g.25 EPlOSAG00000049332_circ_g.26 EPlOSAG00000049332_circ_g.27 EPlOSAG00000049332_circ_g.28 EPlOSAG00000049332_circ_g.29 EPlOSAG00000049332_circ_g.30 EPlOSAG00000049332_circ_g.31 EPlOSAG00000049332_circ_g.32 EPlOSAG00000049332_circ_g.33 EPlOSAG00000049332_circ_g.34 EPlOSAG00000049332_circ_g.35 EPlOSAG00000049332_circ_g.36 EPlOSAG00000049332_circ_g.37 EPlOSAG00000049332_circ_g.38 EPlOSAG00000049332_circ_g.39 EPlOSAG00000049332_circ_g.40 EPlOSAG00000049332_circ_g.41 EPlOSAG00000049332_circ_g.42 EPlOSAG00000049332_circ_g.43 EPlOSAG00000049332_circ_g.44 EPlOSAG00000049332_circ_g.45 EPlOSAG00000049332_circ_g.46 EPlOSAG00000049332_circ_g.47 EPlOSAG00000049332_circ_g.48 EPlOSAG00000049332_circ_g.49 EPlOSAG00000049332_circ_g.50 EPlOSAG00000049332_circ_g.51 EPlOSAG00000049332_circ_g.52 EPlOSAG00000049332_circ_g.53 EPlOSAG00000049332_circ_g.54 EPlOSAG00000049332_circ_g.55 EPlOSAG00000049332_circ_g.56 EPlOSAG00000049332_circ_g.57 EPlOSAG00000049332_circ_g.58 EPlOSAG00000049332_circ_g.59 EPlOSAG00000049332_circ_g.60 EPlOSAG00000049332_circ_g.61 EPlOSAG00000049332_circ_g.62 EPlOSAG00000049332_circ_g.63 EPlOSAG00000049332_circ_g.64 EPlOSAG00000049332_circ_g.65 EPlOSAG00000049332_circ_g.66 EPlOSAG00000049332_circ_g.67 						
					
						Support reads
						3
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	Os10g0501000_circ_ag.1
ID in PlantcircBase	osa_circ_007495
Alias	Os_ciR3289
Organism	Oryza sativa
Position	chr10: 19104518-19109362 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ag-circRNA
Identification method	find_circ
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	EPlOSAG00000049343_circ_igg.1 EPlOSAG00000049343_circ_igg.2 EPlOSAG00000010307_circ_g.1 EPlOSAG00000049343_circ_g.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_igg.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_g.52 EPlOSAG00000049343_circ_g.53 EPlOSAG00000049343_circ_g.54 EPlOSAG00000049343_circ_g.55 EPlOSAG00000049343_circ_g.56 EPlOSAG00000049343_circ_g.57 EPlOSAG00000049343_circ_g.58 EPlOSAG00000049343_circ_g.59 EPlOSAG00000049343_circ_g.60 EPlOSAG00000049343_circ_g.61 EPlOSAG00000049343_circ_g.62 EPlOSAG00000049343_circ_g.63 EPlOSAG00000049343_circ_g.64 EPlOSAG00000049343_circ_g.65 EPlOSAG00000049343_circ_g.66 EPlOSAG00000049343_circ_g.67 EPlOSAG00000049343_circ_g.68 EPlOSAG00000049343_circ_g.69 EPlOSAG00000049343_circ_g.70 EPlOSAG00000049343_circ_g.71 EPlOSAG00000049343_circ_g.72 EPlOSAG00000049343_circ_g.73 EPlOSAG00000049343_circ_g.74 EPlOSAG00000049343_circ_g.75 EPlOSAG00000049343_circ_g.76 EPlOSAG00000049343_circ_g.77 EPlOSAG00000049343_circ_g.78 EPlOSAG00000049343_circ_g.79 EPlOSAG00000049343_circ_g.80 EPlOSAG00000049343_circ_g.81 EPlOSAG00000049343_circ_g.82 EPlOSAG00000049343_circ_g.83 EPlOSAG00000049343_circ_ag.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_g.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_igg.52 Os10g0499600_circ_g.1 Os10g0499600_circ_g.2 Os10g0500300_circ_g.1 Os10g0500300_circ_g.2 Os10g0500600_circ_g.1 Os10g0500600_circ_g.2 Os10g0500700_circ_g.1 Os10g0500700_circ_g.2 Os10g0500700_circ_g.3 Os10g0500700_circ_g.4 Os10g0500700_circ_g.5 Os10g0500700_circ_g.6 Os10g0500700_circ_g.7 Os10g0500700_circ_g.8 Os10g0501500_circ_g.1 Os10g0501500_circ_g.2 EPlOSAG00000049332_circ_g.1 EPlOSAG00000049332_circ_g.2 EPlOSAG00000049332_circ_g.3 EPlOSAG00000049332_circ_g.4 EPlOSAG00000049332_circ_g.5 EPlOSAG00000049332_circ_g.6 EPlOSAG00000049332_circ_g.7 EPlOSAG00000049332_circ_g.8 EPlOSAG00000049332_circ_g.9 EPlOSAG00000049332_circ_g.10 EPlOSAG00000049332_circ_g.11 EPlOSAG00000049332_circ_g.12 EPlOSAG00000049332_circ_g.13 EPlOSAG00000049332_circ_g.14 EPlOSAG00000049332_circ_g.15 EPlOSAG00000049332_circ_g.16 EPlOSAG00000049332_circ_g.17 EPlOSAG00000049332_circ_g.18 EPlOSAG00000049332_circ_g.19 EPlOSAG00000049332_circ_g.20 EPlOSAG00000049332_circ_g.21 EPlOSAG00000049332_circ_g.22 EPlOSAG00000049332_circ_g.23 EPlOSAG00000049332_circ_g.24 EPlOSAG00000049332_circ_g.25 EPlOSAG00000049332_circ_g.26 EPlOSAG00000049332_circ_g.27 EPlOSAG00000049332_circ_g.28 EPlOSAG00000049332_circ_g.29 EPlOSAG00000049332_circ_g.30 EPlOSAG00000049332_circ_g.31 EPlOSAG00000049332_circ_g.32 EPlOSAG00000049332_circ_g.33 EPlOSAG00000049332_circ_g.34 EPlOSAG00000049332_circ_g.35 EPlOSAG00000049332_circ_g.36 EPlOSAG00000049332_circ_g.37 EPlOSAG00000049332_circ_g.38 EPlOSAG00000049332_circ_g.39 EPlOSAG00000049332_circ_g.40 EPlOSAG00000049332_circ_g.41 EPlOSAG00000049332_circ_g.42 EPlOSAG00000049332_circ_g.43 EPlOSAG00000049332_circ_g.44 EPlOSAG00000049332_circ_g.45 EPlOSAG00000049332_circ_g.46 EPlOSAG00000049332_circ_g.47 EPlOSAG00000049332_circ_g.48 EPlOSAG00000049332_circ_g.49 EPlOSAG00000049332_circ_g.50 EPlOSAG00000049332_circ_g.51 EPlOSAG00000049332_circ_g.52 EPlOSAG00000049332_circ_g.53 EPlOSAG00000049332_circ_g.54 EPlOSAG00000049332_circ_g.55 EPlOSAG00000049332_circ_g.56 EPlOSAG00000049332_circ_g.57 EPlOSAG00000049332_circ_g.58 EPlOSAG00000049332_circ_g.59 EPlOSAG00000049332_circ_g.60 EPlOSAG00000049332_circ_g.61 EPlOSAG00000049332_circ_g.62 EPlOSAG00000049332_circ_g.63 EPlOSAG00000049332_circ_g.64 EPlOSAG00000049332_circ_g.65 EPlOSAG00000049332_circ_g.66 EPlOSAG00000049332_circ_g.67
Support reads	3
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAGTGGTGCCTCGCCGAGGAACGCCCTATCGCGAAGCCCGAGATCCAGTCCATCATCAAGTAT
CTCTGCCGCCGCCGCCGCTTCTCTCAGGCGCTCCAGctttccatgtggatgactgagcggctgc
acctccatctatcccccggcgacgtcgcgaatcggctggagctgatcaccaaggtctatggcct
cgataggg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTCCATGTGGATGACTGAGCGGCTGCACCTCCATCTATCCCCCGGCGACGTCGCGAATCGGC
TGGAGCTGATCACCAAGGTCTATGGCCTCGATAGGGCCGTGGAGTACTTCGACAGCATGCCGGA
TCAGCTGAAGCAACAGCAGTGCTATGGCTCCCTGCTTAAATGCTACGCCGAGGCCAATTGCGTG
GAGAAGGCGGAGGAGCTCTTCGAGAAGATGCGGGGCATGGGGATGGCCAGTTCTTACGCTTACA
ATGTGATGATGAGGCTTTATTTGCAGAATGGGCAGGTTGAGAGGGTGCACTCCATGCATCAGGC
TATGGAAGAGAGTGGTATTGTTCCTGATGTATCCACTACTCACACTCTGGTGGCAGTTCTAAGA
AAAAAAAAGACTCTGGTGGCAGCGTACGTGGTTGCTGAAGATATTAAGGCGATTGAAAATGTTC
TCGAGAAGGCCAATTCGTGCAACTCAATGTACATGTGCAGGATTGGTGTCCTACTTAAGATGAA
TGACATGGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATTCC
CGGTTAATCAACTTATTGGTGGATGCTTACTGCAAAGAAGGTCTTATGGATAAGGCAGAAGCTC
TTGTAGATCAATTCATCAAGAAAGGGAGGATGCCTTTTGCCAATACTTGTTATAAGTTGGCTGG
TGGATATTTCAAGGTTGGTCAGGTGTCGAAGGCAGCAGATCTCACAAAGAAGGCACTTGCTTCT
GCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCCTGAACTATTTCGCGGAGC
AAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTACAGAGATTGGTTACTCCAACAAG
GGACATTTACCATGGGTTACTGAAGACATATGTCAATGCAGGAAAACCAGTGTCAGACTTGCTT
CATCGTATGAAAAAAGATGGTATGGAGGCTGATGAGGAGACAGAGAAAATCCTTGCGGGAGAAG
TCCACTAGGTACACAGGATTGAATAAAACATATCACTGACCAATTCCTTTTCTTTGCTTATTTT
GCTGTCCTTTTTCTTGTTTCTGGGGCAATGAAGTTCAAACCCACTAGCCCGTGGATTTGAGTAT
TTGATAATAAACCACTATACAACTGCTTATATAGGAACTCGCCATTCTTCTATGCATGTGATGG
TGTCATTGTGCTGTGCGGATATGTCTATGTCTTTGCCGTATGGCTATGTGAAATTTTGCAGTAG
TGGTAGGATCTGAGATGTTTAGTATTTTACCTTTTGTTTTCATGGAAGGCCTGGTTTTCCTTGG
CACGCATCACTCATCATGAGCTTGAATGAATGATCAAATGATCAATCTAAACTAGTGTTGCGTG
TTTACACGATTATAACCTCCTTCTCTATAAAGATGTATAATAATTAACTATTTTTTTAAAATAA
TATTTAATAACATAAATTAGTATTTTCTCCTTTTATAATATAATTTGTTTATACTTCCCTTGTA
ATAGATATAATTTTAGTAAATTCAATTCTATTCTACATAGATGTTCAGAGAACATATTTAGCAG
GAAACCTAGTATGTCTTTTTTTTATTTTACACAAAAGGCCATTTATTTAAATAAGTTGTATAGA
AATGTCAATTGTGAGAATTAAAATTAATTACATGATTATACTTTTAAACTGACATGATTTTTAG
TTCTTTTATGGTCAGAATGTTAATTTACAACAGTTTAAAACTTTAAATTATCGGTTGCAGCTGG
TGGTGAACTGTCACTATTCTCTCTTCACAGGAAGTCCACGTTAATTTGAATAATCAAGTGGTTA
TTGTTTTTCGGTTATATATTTGCCAACAATAAATTCTTTTATGAATAATTCAGTATGTACAATC
TTACATTGGGGTAAAACTTTGCCAGGATATAAATGTACAACCATAAAAATATAGATAAAATTGG
CCATGCGCGTAAATCAACAAACGGTTCATACAAAGAATAAAAATTAGAGAAACTAACTTATTGC
ATTGCTCATTGAAAAAAGGGATCAGGATCCTCTGCAGTCGAAGTCACGTGACTTTGTCATTGAC
ATATGGGCCCAATGATTCTTGGACCCATATGTCAGTGATAAAGGCACTATGCATTTGACTGCAG
AGGACCTCAATCCTGACAAAAGATGTACAGATTTCAGAAATGCCAAGCTCTTTCATTTGGTTGT
GATGGAATCCAAGAAGAACTATTAAACATGAGAAATAATTCATTGCAATACAGGAAGTTAGTGT
CTACGGGCGAACTTCTACCGCTTAGATTTTCTCATGTTTAATAGTTCTACAAGAATATACACTG
GATTTTCACTAAATGCATGTCTCCATAGACAATCTGAGTTAGAAAATTTTTTTAGCAATTTGAC
GCATTATGATGCATATCGTTGCCTTGGATATTCTTATGAGAATATTACTTTGCCCAGATTCACT
AAACTCCAGGAACACTTCATATTTAAGAAAATGCAGTTTGAGATATGTATAAGTGCAATCAGCT
GCTGCCTTGTTACAGGACCTTCTAGGTGCACACAATTAGTACCAGTGTGCTCATGGTGCAGATT
CCTTTGAAATGCTAATGGGGTGAACACCGTGAGTTCATAAGTAATAAACCGTTTGCAGTGGCGC
CATTAATCTTTTGTTTATGTGTTAATATTTTTTTCGTAAATTTTCTGATTTTTTAAACACCTGG
AGTAAGGGCATGATTTCAGGTTACTCCTTCTGTAGTTGGGGAATATTATTTTTGTACATCATCA
ACTGATTTCAATCATTCAATGGTGAAATCGTTGAAATGAGCAGAAAAAATGACTCATGTTGAAA
ATGGAAGTAGTACTTTCTCTTAATGAGGATGAAAGATTCATACAATCATACTTCCTAATATATT
TTCTGATGCAATTTAGGAGCACCAAGCACATACTTACCCTGTTGCCTGACAATCTCATTTGTGC
TCTCTTAATATGCTTTGCATTCATAAACCACCAACAAAATGTAAAATTATGTTATGAACTGAAC
TGAAATCATGCATCAGCAAAGGAATGCTTTTAATTGTACATGTTGAAAAGTATATAGTTTAACA
TGATTTACAAGTTTTATTACATTAAACAGCAGCAAAAGTTTCAATATCCAATTAAAATTTCGAT
TTAGGAAGCAAGTTGTACTTTGCAGCATAACTAATATTCAAAACATCATTCAAGAATACCCATG
TTTTGCTCCAGAGAAGGAGCTGTGATGTAGTAATGTCTAACCTTGGAGATGGGCAACTGATATG
GCAGTTGGTTCCGGCAGTGGAGGTGAAGATGCTGCTCTGATCATCCCTCCTTGCAGGGGTGGGA
ATCCTTTACCATAATGTCACTACCATTATAGTCACTGACATGGGGGTTCTATCCTCTTATTACT
CCACACGTCAGTGGTTGTAGTGGTAGTACCATTATGGTAGAGGATGTGAATTTTTACGTATAGG
GAACTTGTCCCTGAAGAACCTCGAGTATTTGGTCGGTGGGTGCTCGCACTGCCCCTGGCAGGCC
AGCTATAGTAGGTGTCGTACGTTGCTAAACTTGTAGCATGTGCTGTCGCAACCCCCCGTCTCCG
GCTGATCTCGACGGCGCACGTCAGTCAGCGTATCTTAGTGCAGCGAGCGACATTTTTGGTTGGC
TGAAAGCTCACCGGCACGTTGAAGCCGTCGATGACGCCGGGGTTGCGACTTGCGAGCGTGTACC
TGGCCAACGTCGTGCCAGTGACAGCGTGGGCCATCGTGTTTTGGGCAGTCGCCGGTGATGCAGT
GGCCGCGGTCAGCGCCGTTAAAGCTGCAGCCCATGCTCCGCCGCCGTTTTGGATCCGGGAGAAT
CTAGCCGCTAGGATTCCTATGGTGACCTTGGCTGTGTTCGAGGGAGAAGGGATTGGGAAGATAC
GCAAAACGAGGTGAGTCATTAGCGTATAATTAATTGAGTATTAACTATTTTAAACTTTAAAAAT
AGATTAATATGATTTTTTAAAACAATTTTTCTATAGAAAATTTTTATAAAAAACAAACCGTTTA
GTAGTTTGAAAAAAGTGCGTGCGGAAAACGAGTCAGTCTCCCCTTTCTCCTGTCAACGTACGCA
GCCCTTGTGAGGAGAAGAAGAGTAGGTGGTGGCGGTGATGCCTTGTGCCGCGCGCAGGGGAGGA
GACAGGGGGATTGCGGTTCACGCGCGAGCTATATTTGATTGGGCTAGATGGGCCTCGCTGATCC
GCTGCTACCGCAGCTGGGCTTGCCCATTACGCGTTGCTATAGACGCCCTTTCATTTTTTTTATT
TTATTATTTTTTTTGCGATTTCCTTCCCCTCTCCCCTCCCAAAACCCTCGCCCCGACTTCGCCG
GAGCGCCGACGCCGCCCCCCCACCATGCTGCTGCACCGCCGTGGTCTCCTCCTCCGCGGCGGCG
GCGGCCTCCTCCGCCGCCTATCAGTGGCGGTCGAGGAATCCGTCTCCCCGTCGCCGCCTCCTCC
GCCGCCGCGGCAACCGCAGGAGGACTCCGTGGATGACGAGGAAACGGCCTCGCCCTCGCCGGGG
AAACCGCAGGAGGGCTCCGTGGCCGCCGAGGAGAGAGCCTCTCCCTCGCCTCCTCCGCCGCGGC
GCAAGAAGGACTCCCTCTTCCGCCGGGTCGCGGCCGCCGCGGACCCGCGCCTCCCGCTTTCCCC
CGTCCTGGAGCAGTGGTGCCTCGCCGAGGAACGCCCTATCGCGAAGCCCGAGATCCAGTCCATC
ATCAAGTATCTCTGCCGCCGCCGCCGCTTCTCTCAGGCGCTCCAG
						
					

			
		

Sequences
Splice junction sequence	GCAGTGGTGCCTCGCCGAGGAACGCCCTATCGCGAAGCCCGAGATCCAGTCCATCATCAAGTAT CTCTGCCGCCGCCGCCGCTTCTCTCAGGCGCTCCAGctttccatgtggatgactgagcggctgc acctccatctatcccccggcgacgtcgcgaatcggctggagctgatcaccaaggtctatggcct cgataggg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTCCATGTGGATGACTGAGCGGCTGCACCTCCATCTATCCCCCGGCGACGTCGCGAATCGGC TGGAGCTGATCACCAAGGTCTATGGCCTCGATAGGGCCGTGGAGTACTTCGACAGCATGCCGGA TCAGCTGAAGCAACAGCAGTGCTATGGCTCCCTGCTTAAATGCTACGCCGAGGCCAATTGCGTG GAGAAGGCGGAGGAGCTCTTCGAGAAGATGCGGGGCATGGGGATGGCCAGTTCTTACGCTTACA ATGTGATGATGAGGCTTTATTTGCAGAATGGGCAGGTTGAGAGGGTGCACTCCATGCATCAGGC TATGGAAGAGAGTGGTATTGTTCCTGATGTATCCACTACTCACACTCTGGTGGCAGTTCTAAGA AAAAAAAAGACTCTGGTGGCAGCGTACGTGGTTGCTGAAGATATTAAGGCGATTGAAAATGTTC TCGAGAAGGCCAATTCGTGCAACTCAATGTACATGTGCAGGATTGGTGTCCTACTTAAGATGAA TGACATGGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATTCC CGGTTAATCAACTTATTGGTGGATGCTTACTGCAAAGAAGGTCTTATGGATAAGGCAGAAGCTC TTGTAGATCAATTCATCAAGAAAGGGAGGATGCCTTTTGCCAATACTTGTTATAAGTTGGCTGG TGGATATTTCAAGGTTGGTCAGGTGTCGAAGGCAGCAGATCTCACAAAGAAGGCACTTGCTTCT GCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCCTGAACTATTTCGCGGAGC AAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTACAGAGATTGGTTACTCCAACAAG GGACATTTACCATGGGTTACTGAAGACATATGTCAATGCAGGAAAACCAGTGTCAGACTTGCTT CATCGTATGAAAAAAGATGGTATGGAGGCTGATGAGGAGACAGAGAAAATCCTTGCGGGAGAAG TCCACTAGGTACACAGGATTGAATAAAACATATCACTGACCAATTCCTTTTCTTTGCTTATTTT GCTGTCCTTTTTCTTGTTTCTGGGGCAATGAAGTTCAAACCCACTAGCCCGTGGATTTGAGTAT TTGATAATAAACCACTATACAACTGCTTATATAGGAACTCGCCATTCTTCTATGCATGTGATGG TGTCATTGTGCTGTGCGGATATGTCTATGTCTTTGCCGTATGGCTATGTGAAATTTTGCAGTAG TGGTAGGATCTGAGATGTTTAGTATTTTACCTTTTGTTTTCATGGAAGGCCTGGTTTTCCTTGG CACGCATCACTCATCATGAGCTTGAATGAATGATCAAATGATCAATCTAAACTAGTGTTGCGTG TTTACACGATTATAACCTCCTTCTCTATAAAGATGTATAATAATTAACTATTTTTTTAAAATAA TATTTAATAACATAAATTAGTATTTTCTCCTTTTATAATATAATTTGTTTATACTTCCCTTGTA ATAGATATAATTTTAGTAAATTCAATTCTATTCTACATAGATGTTCAGAGAACATATTTAGCAG GAAACCTAGTATGTCTTTTTTTTATTTTACACAAAAGGCCATTTATTTAAATAAGTTGTATAGA AATGTCAATTGTGAGAATTAAAATTAATTACATGATTATACTTTTAAACTGACATGATTTTTAG TTCTTTTATGGTCAGAATGTTAATTTACAACAGTTTAAAACTTTAAATTATCGGTTGCAGCTGG TGGTGAACTGTCACTATTCTCTCTTCACAGGAAGTCCACGTTAATTTGAATAATCAAGTGGTTA TTGTTTTTCGGTTATATATTTGCCAACAATAAATTCTTTTATGAATAATTCAGTATGTACAATC TTACATTGGGGTAAAACTTTGCCAGGATATAAATGTACAACCATAAAAATATAGATAAAATTGG CCATGCGCGTAAATCAACAAACGGTTCATACAAAGAATAAAAATTAGAGAAACTAACTTATTGC ATTGCTCATTGAAAAAAGGGATCAGGATCCTCTGCAGTCGAAGTCACGTGACTTTGTCATTGAC ATATGGGCCCAATGATTCTTGGACCCATATGTCAGTGATAAAGGCACTATGCATTTGACTGCAG AGGACCTCAATCCTGACAAAAGATGTACAGATTTCAGAAATGCCAAGCTCTTTCATTTGGTTGT GATGGAATCCAAGAAGAACTATTAAACATGAGAAATAATTCATTGCAATACAGGAAGTTAGTGT CTACGGGCGAACTTCTACCGCTTAGATTTTCTCATGTTTAATAGTTCTACAAGAATATACACTG GATTTTCACTAAATGCATGTCTCCATAGACAATCTGAGTTAGAAAATTTTTTTAGCAATTTGAC GCATTATGATGCATATCGTTGCCTTGGATATTCTTATGAGAATATTACTTTGCCCAGATTCACT AAACTCCAGGAACACTTCATATTTAAGAAAATGCAGTTTGAGATATGTATAAGTGCAATCAGCT GCTGCCTTGTTACAGGACCTTCTAGGTGCACACAATTAGTACCAGTGTGCTCATGGTGCAGATT CCTTTGAAATGCTAATGGGGTGAACACCGTGAGTTCATAAGTAATAAACCGTTTGCAGTGGCGC CATTAATCTTTTGTTTATGTGTTAATATTTTTTTCGTAAATTTTCTGATTTTTTAAACACCTGG AGTAAGGGCATGATTTCAGGTTACTCCTTCTGTAGTTGGGGAATATTATTTTTGTACATCATCA ACTGATTTCAATCATTCAATGGTGAAATCGTTGAAATGAGCAGAAAAAATGACTCATGTTGAAA ATGGAAGTAGTACTTTCTCTTAATGAGGATGAAAGATTCATACAATCATACTTCCTAATATATT TTCTGATGCAATTTAGGAGCACCAAGCACATACTTACCCTGTTGCCTGACAATCTCATTTGTGC TCTCTTAATATGCTTTGCATTCATAAACCACCAACAAAATGTAAAATTATGTTATGAACTGAAC TGAAATCATGCATCAGCAAAGGAATGCTTTTAATTGTACATGTTGAAAAGTATATAGTTTAACA TGATTTACAAGTTTTATTACATTAAACAGCAGCAAAAGTTTCAATATCCAATTAAAATTTCGAT TTAGGAAGCAAGTTGTACTTTGCAGCATAACTAATATTCAAAACATCATTCAAGAATACCCATG TTTTGCTCCAGAGAAGGAGCTGTGATGTAGTAATGTCTAACCTTGGAGATGGGCAACTGATATG GCAGTTGGTTCCGGCAGTGGAGGTGAAGATGCTGCTCTGATCATCCCTCCTTGCAGGGGTGGGA ATCCTTTACCATAATGTCACTACCATTATAGTCACTGACATGGGGGTTCTATCCTCTTATTACT CCACACGTCAGTGGTTGTAGTGGTAGTACCATTATGGTAGAGGATGTGAATTTTTACGTATAGG GAACTTGTCCCTGAAGAACCTCGAGTATTTGGTCGGTGGGTGCTCGCACTGCCCCTGGCAGGCC AGCTATAGTAGGTGTCGTACGTTGCTAAACTTGTAGCATGTGCTGTCGCAACCCCCCGTCTCCG GCTGATCTCGACGGCGCACGTCAGTCAGCGTATCTTAGTGCAGCGAGCGACATTTTTGGTTGGC TGAAAGCTCACCGGCACGTTGAAGCCGTCGATGACGCCGGGGTTGCGACTTGCGAGCGTGTACC TGGCCAACGTCGTGCCAGTGACAGCGTGGGCCATCGTGTTTTGGGCAGTCGCCGGTGATGCAGT GGCCGCGGTCAGCGCCGTTAAAGCTGCAGCCCATGCTCCGCCGCCGTTTTGGATCCGGGAGAAT CTAGCCGCTAGGATTCCTATGGTGACCTTGGCTGTGTTCGAGGGAGAAGGGATTGGGAAGATAC GCAAAACGAGGTGAGTCATTAGCGTATAATTAATTGAGTATTAACTATTTTAAACTTTAAAAAT AGATTAATATGATTTTTTAAAACAATTTTTCTATAGAAAATTTTTATAAAAAACAAACCGTTTA GTAGTTTGAAAAAAGTGCGTGCGGAAAACGAGTCAGTCTCCCCTTTCTCCTGTCAACGTACGCA GCCCTTGTGAGGAGAAGAAGAGTAGGTGGTGGCGGTGATGCCTTGTGCCGCGCGCAGGGGAGGA GACAGGGGGATTGCGGTTCACGCGCGAGCTATATTTGATTGGGCTAGATGGGCCTCGCTGATCC GCTGCTACCGCAGCTGGGCTTGCCCATTACGCGTTGCTATAGACGCCCTTTCATTTTTTTTATT TTATTATTTTTTTTGCGATTTCCTTCCCCTCTCCCCTCCCAAAACCCTCGCCCCGACTTCGCCG GAGCGCCGACGCCGCCCCCCCACCATGCTGCTGCACCGCCGTGGTCTCCTCCTCCGCGGCGGCG GCGGCCTCCTCCGCCGCCTATCAGTGGCGGTCGAGGAATCCGTCTCCCCGTCGCCGCCTCCTCC GCCGCCGCGGCAACCGCAGGAGGACTCCGTGGATGACGAGGAAACGGCCTCGCCCTCGCCGGGG AAACCGCAGGAGGGCTCCGTGGCCGCCGAGGAGAGAGCCTCTCCCTCGCCTCCTCCGCCGCGGC GCAAGAAGGACTCCCTCTTCCGCCGGGTCGCGGCCGCCGCGGACCCGCGCCTCCCGCTTTCCCC CGTCCTGGAGCAGTGGTGCCTCGCCGAGGAACGCCCTATCGCGAAGCCCGAGATCCAGTCCATC ATCAAGTATCTCTGCCGCCGCCGCCGCTTCTCTCAGGCGCTCCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.42850714

Conservation Information
Conserved circRNAs	NA
PMCS	0.42850714

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os10g0501000_circ_ag.1

Address

Any questions?

Supported by