Detail information of EPlOSAG00000049343_circ_igg.52


General Information
CircRNA Name EPlOSAG00000049343_circ_igg.52
ID in PlantcircBase osa_circ_007481
Alias Os_ciR702
Organism Oryza sativa
Position chr10: 19040674-19040774  JBrowse»
Reference genome IRGSP-1.0.38
Type   igg-circRNA
Identification method find_circ
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing EPlOSAG00000049343_circ_igg.1 EPlOSAG00000049343_circ_igg.2 EPlOSAG00000010307_circ_g.1 EPlOSAG00000049343_circ_g.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_igg.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_g.52 EPlOSAG00000049343_circ_g.53 EPlOSAG00000049343_circ_g.54 EPlOSAG00000049343_circ_g.55 EPlOSAG00000049343_circ_g.56 EPlOSAG00000049343_circ_g.57 EPlOSAG00000049343_circ_g.58 EPlOSAG00000049343_circ_g.59 EPlOSAG00000049343_circ_g.60 EPlOSAG00000049343_circ_g.61 EPlOSAG00000049343_circ_g.62 EPlOSAG00000049343_circ_g.63 EPlOSAG00000049343_circ_g.64 EPlOSAG00000049343_circ_g.65 EPlOSAG00000049343_circ_g.66 EPlOSAG00000049343_circ_g.67 EPlOSAG00000049343_circ_g.68 EPlOSAG00000049343_circ_g.69 EPlOSAG00000049343_circ_g.70 EPlOSAG00000049343_circ_g.71 EPlOSAG00000049343_circ_g.72 EPlOSAG00000049343_circ_g.73 EPlOSAG00000049343_circ_g.74 EPlOSAG00000049343_circ_g.75 EPlOSAG00000049343_circ_g.76 EPlOSAG00000049343_circ_g.77 EPlOSAG00000049343_circ_g.78 EPlOSAG00000049343_circ_g.79 EPlOSAG00000049343_circ_g.80 EPlOSAG00000049343_circ_g.81 EPlOSAG00000049343_circ_g.82 EPlOSAG00000049343_circ_g.83 EPlOSAG00000049343_circ_ag.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_g.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 Os10g0499600_circ_g.1 Os10g0499600_circ_g.2 Os10g0500300_circ_g.1 Os10g0500300_circ_g.2 Os10g0500600_circ_g.1 Os10g0500600_circ_g.2 Os10g0500700_circ_g.1 Os10g0500700_circ_g.2 Os10g0500700_circ_g.3 Os10g0500700_circ_g.4 Os10g0500700_circ_g.5 Os10g0500700_circ_g.6 Os10g0500700_circ_g.7 Os10g0500700_circ_g.8 Os10g0501000_circ_ag.1 Os10g0501500_circ_g.1 Os10g0501500_circ_g.2 EPlOSAG00000049332_circ_g.1 EPlOSAG00000049332_circ_g.2 EPlOSAG00000049332_circ_g.3 EPlOSAG00000049332_circ_g.4 EPlOSAG00000049332_circ_g.5 EPlOSAG00000049332_circ_g.6 EPlOSAG00000049332_circ_g.7 EPlOSAG00000049332_circ_g.8 EPlOSAG00000049332_circ_g.9 EPlOSAG00000049332_circ_g.10 EPlOSAG00000049332_circ_g.11 EPlOSAG00000049332_circ_g.12 EPlOSAG00000049332_circ_g.13 EPlOSAG00000049332_circ_g.14 EPlOSAG00000049332_circ_g.15 EPlOSAG00000049332_circ_g.16 EPlOSAG00000049332_circ_g.17 EPlOSAG00000049332_circ_g.18 EPlOSAG00000049332_circ_g.19 EPlOSAG00000049332_circ_g.20 EPlOSAG00000049332_circ_g.21 EPlOSAG00000049332_circ_g.22 EPlOSAG00000049332_circ_g.23 EPlOSAG00000049332_circ_g.24 EPlOSAG00000049332_circ_g.25 EPlOSAG00000049332_circ_g.26 EPlOSAG00000049332_circ_g.27 EPlOSAG00000049332_circ_g.28 EPlOSAG00000049332_circ_g.29 EPlOSAG00000049332_circ_g.30 EPlOSAG00000049332_circ_g.31 EPlOSAG00000049332_circ_g.32 EPlOSAG00000049332_circ_g.33 EPlOSAG00000049332_circ_g.34 EPlOSAG00000049332_circ_g.35 EPlOSAG00000049332_circ_g.36 EPlOSAG00000049332_circ_g.37 EPlOSAG00000049332_circ_g.38 EPlOSAG00000049332_circ_g.39 EPlOSAG00000049332_circ_g.40 EPlOSAG00000049332_circ_g.41 EPlOSAG00000049332_circ_g.42 EPlOSAG00000049332_circ_g.43 EPlOSAG00000049332_circ_g.44 EPlOSAG00000049332_circ_g.45 EPlOSAG00000049332_circ_g.46 EPlOSAG00000049332_circ_g.47 EPlOSAG00000049332_circ_g.48 EPlOSAG00000049332_circ_g.49 EPlOSAG00000049332_circ_g.50 EPlOSAG00000049332_circ_g.51 EPlOSAG00000049332_circ_g.52 EPlOSAG00000049332_circ_g.53 EPlOSAG00000049332_circ_g.54 EPlOSAG00000049332_circ_g.55 EPlOSAG00000049332_circ_g.56 EPlOSAG00000049332_circ_g.57 EPlOSAG00000049332_circ_g.58 EPlOSAG00000049332_circ_g.59 EPlOSAG00000049332_circ_g.60 EPlOSAG00000049332_circ_g.61 EPlOSAG00000049332_circ_g.62 EPlOSAG00000049332_circ_g.63 EPlOSAG00000049332_circ_g.64 EPlOSAG00000049332_circ_g.65 EPlOSAG00000049332_circ_g.66 EPlOSAG00000049332_circ_g.67
Support reads 36
Tissues root
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ACCTTATTGCCCCCGCTCGGGTGACAAGCCAACGCTACCTGGCTCGGCGAtgcaaaccacaggc
gcagaccccaagcgcaaacgaccaggcatccaacacc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TGCAAACCACAGGCGCAGACCCCAAGCGCAAACGACCAGGCATCCAACACCACCTTATTGCCCC
CGCTCGGGTGACAAGCCAACGCTACCTGGCTCGGCGA
Conservation Information
Conserved circRNAs NA
PMCS 0.434445462
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Ye et al., 2015