Plant Circular RNA Database

Detail information of Os10g0500300_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os10g0500300_circ_g.2
					
						ID in PlantcircBase
						osa_circ_007485
					
						Alias
						Os_ciR5164
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 19079439-19080085  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os10g0500300						
					
						Parent gene annotation
						
							Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10
t0500300-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							EPlOSAG00000049343_circ_igg.1 EPlOSAG00000049343_circ_igg.2 EPlOSAG00000010307_circ_g.1 EPlOSAG00000049343_circ_g.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_igg.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_g.52 EPlOSAG00000049343_circ_g.53 EPlOSAG00000049343_circ_g.54 EPlOSAG00000049343_circ_g.55 EPlOSAG00000049343_circ_g.56 EPlOSAG00000049343_circ_g.57 EPlOSAG00000049343_circ_g.58 EPlOSAG00000049343_circ_g.59 EPlOSAG00000049343_circ_g.60 EPlOSAG00000049343_circ_g.61 EPlOSAG00000049343_circ_g.62 EPlOSAG00000049343_circ_g.63 EPlOSAG00000049343_circ_g.64 EPlOSAG00000049343_circ_g.65 EPlOSAG00000049343_circ_g.66 EPlOSAG00000049343_circ_g.67 EPlOSAG00000049343_circ_g.68 EPlOSAG00000049343_circ_g.69 EPlOSAG00000049343_circ_g.70 EPlOSAG00000049343_circ_g.71 EPlOSAG00000049343_circ_g.72 EPlOSAG00000049343_circ_g.73 EPlOSAG00000049343_circ_g.74 EPlOSAG00000049343_circ_g.75 EPlOSAG00000049343_circ_g.76 EPlOSAG00000049343_circ_g.77 EPlOSAG00000049343_circ_g.78 EPlOSAG00000049343_circ_g.79 EPlOSAG00000049343_circ_g.80 EPlOSAG00000049343_circ_g.81 EPlOSAG00000049343_circ_g.82 EPlOSAG00000049343_circ_g.83 EPlOSAG00000049343_circ_ag.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_g.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_igg.52 Os10g0499600_circ_g.1 Os10g0499600_circ_g.2 Os10g0500300_circ_g.1 Os10g0500600_circ_g.1 Os10g0500600_circ_g.2 Os10g0500700_circ_g.1 Os10g0500700_circ_g.2 Os10g0500700_circ_g.3 Os10g0500700_circ_g.4 Os10g0500700_circ_g.5 Os10g0500700_circ_g.6 Os10g0500700_circ_g.7 Os10g0500700_circ_g.8 Os10g0501000_circ_ag.1 Os10g0501500_circ_g.1 Os10g0501500_circ_g.2 EPlOSAG00000049332_circ_g.1 EPlOSAG00000049332_circ_g.2 EPlOSAG00000049332_circ_g.3 EPlOSAG00000049332_circ_g.4 EPlOSAG00000049332_circ_g.5 EPlOSAG00000049332_circ_g.6 EPlOSAG00000049332_circ_g.7 EPlOSAG00000049332_circ_g.8 EPlOSAG00000049332_circ_g.9 EPlOSAG00000049332_circ_g.10 EPlOSAG00000049332_circ_g.11 EPlOSAG00000049332_circ_g.12 EPlOSAG00000049332_circ_g.13 EPlOSAG00000049332_circ_g.14 EPlOSAG00000049332_circ_g.15 EPlOSAG00000049332_circ_g.16 EPlOSAG00000049332_circ_g.17 EPlOSAG00000049332_circ_g.18 EPlOSAG00000049332_circ_g.19 EPlOSAG00000049332_circ_g.20 EPlOSAG00000049332_circ_g.21 EPlOSAG00000049332_circ_g.22 EPlOSAG00000049332_circ_g.23 EPlOSAG00000049332_circ_g.24 EPlOSAG00000049332_circ_g.25 EPlOSAG00000049332_circ_g.26 EPlOSAG00000049332_circ_g.27 EPlOSAG00000049332_circ_g.28 EPlOSAG00000049332_circ_g.29 EPlOSAG00000049332_circ_g.30 EPlOSAG00000049332_circ_g.31 EPlOSAG00000049332_circ_g.32 EPlOSAG00000049332_circ_g.33 EPlOSAG00000049332_circ_g.34 EPlOSAG00000049332_circ_g.35 EPlOSAG00000049332_circ_g.36 EPlOSAG00000049332_circ_g.37 EPlOSAG00000049332_circ_g.38 EPlOSAG00000049332_circ_g.39 EPlOSAG00000049332_circ_g.40 EPlOSAG00000049332_circ_g.41 EPlOSAG00000049332_circ_g.42 EPlOSAG00000049332_circ_g.43 EPlOSAG00000049332_circ_g.44 EPlOSAG00000049332_circ_g.45 EPlOSAG00000049332_circ_g.46 EPlOSAG00000049332_circ_g.47 EPlOSAG00000049332_circ_g.48 EPlOSAG00000049332_circ_g.49 EPlOSAG00000049332_circ_g.50 EPlOSAG00000049332_circ_g.51 EPlOSAG00000049332_circ_g.52 EPlOSAG00000049332_circ_g.53 EPlOSAG00000049332_circ_g.54 EPlOSAG00000049332_circ_g.55 EPlOSAG00000049332_circ_g.56 EPlOSAG00000049332_circ_g.57 EPlOSAG00000049332_circ_g.58 EPlOSAG00000049332_circ_g.59 EPlOSAG00000049332_circ_g.60 EPlOSAG00000049332_circ_g.61 EPlOSAG00000049332_circ_g.62 EPlOSAG00000049332_circ_g.63 EPlOSAG00000049332_circ_g.64 EPlOSAG00000049332_circ_g.65 EPlOSAG00000049332_circ_g.66 EPlOSAG00000049332_circ_g.67 						
					
						Support reads
						3/2
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0500300-00:3

General Information
CircRNA Name	Os10g0500300_circ_g.2
ID in PlantcircBase	osa_circ_007485
Alias	Os_ciR5164
Organism	Oryza sativa
Position	chr10: 19079439-19080085 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os10g0500300
Parent gene annotation	Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10 t0500300-00)
Parent gene strand	+
Alternative splicing	EPlOSAG00000049343_circ_igg.1 EPlOSAG00000049343_circ_igg.2 EPlOSAG00000010307_circ_g.1 EPlOSAG00000049343_circ_g.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_igg.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_g.52 EPlOSAG00000049343_circ_g.53 EPlOSAG00000049343_circ_g.54 EPlOSAG00000049343_circ_g.55 EPlOSAG00000049343_circ_g.56 EPlOSAG00000049343_circ_g.57 EPlOSAG00000049343_circ_g.58 EPlOSAG00000049343_circ_g.59 EPlOSAG00000049343_circ_g.60 EPlOSAG00000049343_circ_g.61 EPlOSAG00000049343_circ_g.62 EPlOSAG00000049343_circ_g.63 EPlOSAG00000049343_circ_g.64 EPlOSAG00000049343_circ_g.65 EPlOSAG00000049343_circ_g.66 EPlOSAG00000049343_circ_g.67 EPlOSAG00000049343_circ_g.68 EPlOSAG00000049343_circ_g.69 EPlOSAG00000049343_circ_g.70 EPlOSAG00000049343_circ_g.71 EPlOSAG00000049343_circ_g.72 EPlOSAG00000049343_circ_g.73 EPlOSAG00000049343_circ_g.74 EPlOSAG00000049343_circ_g.75 EPlOSAG00000049343_circ_g.76 EPlOSAG00000049343_circ_g.77 EPlOSAG00000049343_circ_g.78 EPlOSAG00000049343_circ_g.79 EPlOSAG00000049343_circ_g.80 EPlOSAG00000049343_circ_g.81 EPlOSAG00000049343_circ_g.82 EPlOSAG00000049343_circ_g.83 EPlOSAG00000049343_circ_ag.1 EPlOSAG00000049343_circ_g.2 EPlOSAG00000049343_circ_g.3 EPlOSAG00000049343_circ_g.4 EPlOSAG00000049343_circ_g.5 EPlOSAG00000049343_circ_g.6 EPlOSAG00000049343_circ_g.7 EPlOSAG00000049343_circ_g.8 EPlOSAG00000049343_circ_g.9 EPlOSAG00000049343_circ_g.10 EPlOSAG00000049343_circ_g.11 EPlOSAG00000049343_circ_g.12 EPlOSAG00000049343_circ_g.13 EPlOSAG00000049343_circ_g.14 EPlOSAG00000049343_circ_g.15 EPlOSAG00000049343_circ_g.16 EPlOSAG00000049343_circ_g.17 EPlOSAG00000049343_circ_g.18 EPlOSAG00000049343_circ_g.19 EPlOSAG00000049343_circ_g.20 EPlOSAG00000049343_circ_g.21 EPlOSAG00000049343_circ_g.22 EPlOSAG00000049343_circ_g.23 EPlOSAG00000049343_circ_g.24 EPlOSAG00000049343_circ_g.25 EPlOSAG00000049343_circ_g.26 EPlOSAG00000049343_circ_g.27 EPlOSAG00000049343_circ_g.28 EPlOSAG00000049343_circ_g.29 EPlOSAG00000049343_circ_g.30 EPlOSAG00000049343_circ_g.31 EPlOSAG00000049343_circ_g.32 EPlOSAG00000049343_circ_g.33 EPlOSAG00000049343_circ_g.34 EPlOSAG00000049343_circ_g.35 EPlOSAG00000049343_circ_g.36 EPlOSAG00000049343_circ_g.37 EPlOSAG00000049343_circ_g.38 EPlOSAG00000049343_circ_g.39 EPlOSAG00000049343_circ_g.40 EPlOSAG00000049343_circ_g.41 EPlOSAG00000049343_circ_g.42 EPlOSAG00000049343_circ_g.43 EPlOSAG00000049343_circ_g.44 EPlOSAG00000049343_circ_g.45 EPlOSAG00000049343_circ_g.46 EPlOSAG00000049343_circ_g.47 EPlOSAG00000049343_circ_g.48 EPlOSAG00000049343_circ_g.49 EPlOSAG00000049343_circ_g.50 EPlOSAG00000049343_circ_g.51 EPlOSAG00000049343_circ_igg.52 Os10g0499600_circ_g.1 Os10g0499600_circ_g.2 Os10g0500300_circ_g.1 Os10g0500600_circ_g.1 Os10g0500600_circ_g.2 Os10g0500700_circ_g.1 Os10g0500700_circ_g.2 Os10g0500700_circ_g.3 Os10g0500700_circ_g.4 Os10g0500700_circ_g.5 Os10g0500700_circ_g.6 Os10g0500700_circ_g.7 Os10g0500700_circ_g.8 Os10g0501000_circ_ag.1 Os10g0501500_circ_g.1 Os10g0501500_circ_g.2 EPlOSAG00000049332_circ_g.1 EPlOSAG00000049332_circ_g.2 EPlOSAG00000049332_circ_g.3 EPlOSAG00000049332_circ_g.4 EPlOSAG00000049332_circ_g.5 EPlOSAG00000049332_circ_g.6 EPlOSAG00000049332_circ_g.7 EPlOSAG00000049332_circ_g.8 EPlOSAG00000049332_circ_g.9 EPlOSAG00000049332_circ_g.10 EPlOSAG00000049332_circ_g.11 EPlOSAG00000049332_circ_g.12 EPlOSAG00000049332_circ_g.13 EPlOSAG00000049332_circ_g.14 EPlOSAG00000049332_circ_g.15 EPlOSAG00000049332_circ_g.16 EPlOSAG00000049332_circ_g.17 EPlOSAG00000049332_circ_g.18 EPlOSAG00000049332_circ_g.19 EPlOSAG00000049332_circ_g.20 EPlOSAG00000049332_circ_g.21 EPlOSAG00000049332_circ_g.22 EPlOSAG00000049332_circ_g.23 EPlOSAG00000049332_circ_g.24 EPlOSAG00000049332_circ_g.25 EPlOSAG00000049332_circ_g.26 EPlOSAG00000049332_circ_g.27 EPlOSAG00000049332_circ_g.28 EPlOSAG00000049332_circ_g.29 EPlOSAG00000049332_circ_g.30 EPlOSAG00000049332_circ_g.31 EPlOSAG00000049332_circ_g.32 EPlOSAG00000049332_circ_g.33 EPlOSAG00000049332_circ_g.34 EPlOSAG00000049332_circ_g.35 EPlOSAG00000049332_circ_g.36 EPlOSAG00000049332_circ_g.37 EPlOSAG00000049332_circ_g.38 EPlOSAG00000049332_circ_g.39 EPlOSAG00000049332_circ_g.40 EPlOSAG00000049332_circ_g.41 EPlOSAG00000049332_circ_g.42 EPlOSAG00000049332_circ_g.43 EPlOSAG00000049332_circ_g.44 EPlOSAG00000049332_circ_g.45 EPlOSAG00000049332_circ_g.46 EPlOSAG00000049332_circ_g.47 EPlOSAG00000049332_circ_g.48 EPlOSAG00000049332_circ_g.49 EPlOSAG00000049332_circ_g.50 EPlOSAG00000049332_circ_g.51 EPlOSAG00000049332_circ_g.52 EPlOSAG00000049332_circ_g.53 EPlOSAG00000049332_circ_g.54 EPlOSAG00000049332_circ_g.55 EPlOSAG00000049332_circ_g.56 EPlOSAG00000049332_circ_g.57 EPlOSAG00000049332_circ_g.58 EPlOSAG00000049332_circ_g.59 EPlOSAG00000049332_circ_g.60 EPlOSAG00000049332_circ_g.61 EPlOSAG00000049332_circ_g.62 EPlOSAG00000049332_circ_g.63 EPlOSAG00000049332_circ_g.64 EPlOSAG00000049332_circ_g.65 EPlOSAG00000049332_circ_g.66 EPlOSAG00000049332_circ_g.67
Support reads	3/2
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0500300-00:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
						 Sequences
					
						Splice junction sequence  
						
							CCGAGAGAGAAGAGGAGTGCGGGATTTGCATGGAGATGAACAGCAAAGTGGTGTTGCCCAACTG
CACCCATAATATGTGCCTCAGATGCTACCAGGACTGggcctccgaatttccccgggagtacgat
ggcgcgtgcctgcagatgcggctctcgtatagccccgcggcgcatatattcctcttcctggtgc
agtggact

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

						Full-length trsnacripts
						
							Transcript length: 453
Transcript exons: 19079439-19079589,19079677-19079743,19079851-19080085
GGCCTCCGAATTTCCCCGGGAGTACGATGGCGCGTGCCTGCAGATGCGGCTCTCGTATAGCCCC
GCGGCGCATATATTCCTCTTCCTGGTGCAGTGGACTGACTGCAGCCTCGCCGGGGCTCTCGGCT
TGCTGAGGATCCTCGTCTACAAGGTTTATGTCGACGGGACGACGACAATGTCTACCCATGAGAG
GAAAGCCAGCATCAAAGAATTCTACGCTGTGATATTTCCTTCTCTGCTGCAACTGCAAAGGGGG
ATTACTGATACGGAGGACAAAAAGCAGAAGGCCGTGTGCATGGAGAGGTACAGAAGGAGAGATG
AGGATGAAAGAAACATCTTATCCGAAATTGATGCCGAGAGAGAAGAGGAGTGCGGGATTTGCAT
GGAGATGAACAGCAAAGTGGTGTTGCCCAACTGCACCCATAATATGTGCCTCAGATGCTACCAG
GACTG
						
						Genomic sequence
						
							GGCCTCCGAATTTCCCCGGGAGTACGATGGCGCGTGCCTGCAGATGCGGCTCTCGTATAGCCCC
GCGGCGCATATATTCCTCTTCCTGGTGCAGTGGACTGACTGCAGCCTCGCCGGGGCTCTCGGCT
TGCTGAGGATCCTCGTCTACAAGGTCTAATGGCATGTTACAATGTATGTTTGTCGGTTCGGTGC
TTGCGTTTCGGAGTTTTTCTTACTGAAATTGTAGCTCATTGTGTAGGTTTATGTCGACGGGACG
ACGACAATGTCTACCCATGAGAGGAAAGCCAGCATCAAAGAATTCTACGGTAATGTAACATGTT
CTTGTAACTTTAGCCGAGGGTCTAATTATGCAGATATTCTCCTCATTGCATTGTTTTATTGATT
GGAATTGTTATATGGTTGGCTGGAACAGCTGTGATATTTCCTTCTCTGCTGCAACTGCAAAGGG
GGATTACTGATACGGAGGACAAAAAGCAGAAGGCCGTGTGCATGGAGAGGTACAGAAGGAGAGA
TGAGGATGAAAGAAACATCTTATCCGAAATTGATGCCGAGAGAGAAGAGGAGTGCGGGATTTGC
ATGGAGATGAACAGCAAAGTGGTGTTGCCCAACTGCACCCATAATATGTGCCTCAGATGCTACC
AGGACTG

Sequences
Splice junction sequence	CCGAGAGAGAAGAGGAGTGCGGGATTTGCATGGAGATGAACAGCAAAGTGGTGTTGCCCAACTG CACCCATAATATGTGCCTCAGATGCTACCAGGACTGggcctccgaatttccccgggagtacgat ggcgcgtgcctgcagatgcggctctcgtatagccccgcggcgcatatattcctcttcctggtgc agtggact
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 453 Transcript exons: 19079439-19079589,19079677-19079743,19079851-19080085 GGCCTCCGAATTTCCCCGGGAGTACGATGGCGCGTGCCTGCAGATGCGGCTCTCGTATAGCCCC GCGGCGCATATATTCCTCTTCCTGGTGCAGTGGACTGACTGCAGCCTCGCCGGGGCTCTCGGCT TGCTGAGGATCCTCGTCTACAAGGTTTATGTCGACGGGACGACGACAATGTCTACCCATGAGAG GAAAGCCAGCATCAAAGAATTCTACGCTGTGATATTTCCTTCTCTGCTGCAACTGCAAAGGGGG ATTACTGATACGGAGGACAAAAAGCAGAAGGCCGTGTGCATGGAGAGGTACAGAAGGAGAGATG AGGATGAAAGAAACATCTTATCCGAAATTGATGCCGAGAGAGAAGAGGAGTGCGGGATTTGCAT GGAGATGAACAGCAAAGTGGTGTTGCCCAACTGCACCCATAATATGTGCCTCAGATGCTACCAG GACTG
Genomic sequence	GGCCTCCGAATTTCCCCGGGAGTACGATGGCGCGTGCCTGCAGATGCGGCTCTCGTATAGCCCC GCGGCGCATATATTCCTCTTCCTGGTGCAGTGGACTGACTGCAGCCTCGCCGGGGCTCTCGGCT TGCTGAGGATCCTCGTCTACAAGGTCTAATGGCATGTTACAATGTATGTTTGTCGGTTCGGTGC TTGCGTTTCGGAGTTTTTCTTACTGAAATTGTAGCTCATTGTGTAGGTTTATGTCGACGGGACG ACGACAATGTCTACCCATGAGAGGAAAGCCAGCATCAAAGAATTCTACGGTAATGTAACATGTT CTTGTAACTTTAGCCGAGGGTCTAATTATGCAGATATTCTCCTCATTGCATTGTTTTATTGATT GGAATTGTTATATGGTTGGCTGGAACAGCTGTGATATTTCCTTCTCTGCTGCAACTGCAAAGGG GGATTACTGATACGGAGGACAAAAAGCAGAAGGCCGTGTGCATGGAGAGGTACAGAAGGAGAGA TGAGGATGAAAGAAACATCTTATCCGAAATTGATGCCGAGAGAGAAGAGGAGTGCGGGATTTGC ATGGAGATGAACAGCAAAGTGGTGTTGCCCAACTGCACCCATAATATGTGCCTCAGATGCTACC AGGACTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_008572 						
					
						PMCS
						0.387839722

Conservation Information
Conserved circRNAs	osi_circ_008572
PMCS	0.387839722

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19080072-19079495(+)
19079483-19080082(+)
19079714-19079972(-)
						
						Potential amino acid sequence
						
							MLPGLGLRISPGVRWRVPADAALV*(+)
MRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPS
LLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHN
MCLRCYQDWASEFPREYDGACLQMRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDG
TTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAE
REEECGICMEMNSKVVLPNCTHNMCLRCYQDWASEFPREYDGACLQMRLSYSPAAHIFLFLVQW
TDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKA
VCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHNMCLRCYQDWASEFPREYD
GACLQMRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYA
VIFPSLLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLP
NCTHNMCLRCYQD(+)
MGRHCRRPVDINLVDEDPQQAESPGEAAVSPLHQEEEYMRRGAIREPHLQARAIVLPGKFGGPV
LVASEAHIMGAVGQHHFAVHLHANPALLFSLGINFG*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	19080072-19079495(+) 19079483-19080082(+) 19079714-19079972(-)
Potential amino acid sequence	MLPGLGLRISPGVRWRVPADAALV(+) MRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPS LLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHN MCLRCYQDWASEFPREYDGACLQMRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDG TTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAE REEECGICMEMNSKVVLPNCTHNMCLRCYQDWASEFPREYDGACLQMRLSYSPAAHIFLFLVQW TDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKA VCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHNMCLRCYQDWASEFPREYD GACLQMRLSYSPAAHIFLFLVQWTDCSLAGALGLLRILVYKVYVDGTTTMSTHERKASIKEFYA VIFPSLLQLQRGITDTEDKKQKAVCMERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLP NCTHNMCLRCYQD(+) MGRHCRRPVDINLVDEDPQQAESPGEAAVSPLHQEEEYMRRGAIREPHLQARAIVLPGKFGGPV LVASEAHIMGAVGQHHFAVHLHANPALLFSLGINFG(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os10g0500300_circ_g.2

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