Splice junction sequence |
GAACAGCACGCACATCTTCCCCTTGTTGATCATGTCCGCCGCCTCGCGGTACCGCTGCCGGATC AGCTTCGCGGGCTCTCCGGCGCTCATCATGATGAGGttgatccccatcttggcgaagacgagct cacactggaaggattttccctgacccttgcctccccagatacccaggatgagtgggaccttgat gttgggga
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 352 Transcript exons: 28935231-28935423,28935591-28935726,28938762-28938784 TTGATCCCCATCTTGGCGAAGACGAGCTCACACTGGAAGGATTTTCCCTGACCCTTGCCTCCCC AGATACCCAGGATGAGTGGGACCTTGATGTTGGGGAGGGTCATGAAGTTCTTGGAGATGTGGAC GACGAGCTTGTCCATGAAAGCAGGGGCGATGTAGAAGCCTCCCATGGTGTTGTCGAAGTCGTAC CCATCACCCGTGGGAGCCTGGAAAAGGGAGTCGACGAAACCCTTCCCCCTGGTGATGTCCTGCT GGTCATCGGAGATGTCGTAGGCGAGACCCTTCCACCTGTCCTGGTCGGTCTGCTTGCCCTCGTC CAGCTCCTTCTCCGGCGCTCATCATGATGAGG
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Genomic sequence |
TTGATCCCCATCTTGGCGAAGACGAGCTCACACTGGAAGGATTTTCCCTGACCCTTGCCTCCCC AGATACCCAGGATGAGTGGGACCTTGATGTTGGGGAGGGTCATGAAGTTCTTGGAGATGTGGAC GACGAGCTTGTCCATGAAAGCAGGGGCGATGTAGAAGCCTCCCATGGTGTTGTCGAAGTCGTAC CTGGAGGTATGTATGCATATATCCAGTCAGTCAATTCGATTCAATTCAGCATATATATGAATAT GATGAATAAAATCGATTGGTGTGGTGTACAAATTAGATTTAGTACGTACGTTCTGAGACCCTGG CTGAGGTACTCGTAGGAGCTGAGGACGGCCTCGTGGGTGCCATCACCCGTGGGAGCCTGGAAAA GGGAGTCGACGAAACCCTTCCCCCTGGTGATGTCCTGCTGGTCATCGGAGATGTCGTAGGCGAG ACCCTTCCACCTGTCCTGGTCGGTCTGCTTGCCCTCGTCCAGCTCCTTGGCCATCACCTTGAAC CTGTTGATGTTGGAGCTCTTGCCATGGTAGTTCACCGCCGATGTCACCTGCTTCTTCAGCTTCT TCCCCAGGAAGTTGGTCGGAGTGGACGCCTGCACATCCATTAATCTCGCAAGTAAGTATCCTCA TTTAATTTGCAGCAAAAACATGTACTTATCAAGCTAGCTAGCTAGCTGCGTATGTATGTGTACC GGAGCTCCAACGGTGGAGGAGAAGGCAGCAGCCATCTTAATTTGCTGAAAGTCGATGATTGTAG AGGATCACTGATGATGGCCGGCCGCTGCTGCTCAAAGTGTAGAGGCCGAGCTGCGGTAGGCCTT AAATAATACAATAGAATTGGACGTCGCCATGGAAGTTGGAGGCTGTGAGAGGCACACACTCGTC CCTGTGGATCAGCTTCCAGATCCTCCACAGGCCACACGCTGAAGATTGGGTTCTGCACACGTGG CGCAATCTCGGCCGGCCGATCCACAGCATAGCATGACTTGGACCTGGATCGGAGTCTGTGAGCG AGTTAGGAGTATATTGTATTAGTGTAGGTAGGAAGGATCTCTTGGCTTCAGTTCCTTGACCTTT CCTCACCACAGAATTCACCCATTTCTGATCAACTCTTTCTCTCTGTTTTTTCTTTTCTTTCCTT GCCTCACATTCGTCTCCCGGCCGGCAGCTAGCGACCAGTTGCTTCATCAGCTCAGCTACTACAT AACCTCTTCATTTTGCATCACCACAGAAAAGCCTTTTGCTGCCTCTCGTTGCCCGGCTTCTTGG ATGAGGCATGGCATGCAAATTGTATTCTAGTTGGACTACCACAAATATTTTGCTCTGCTACCTG CACATATTCTGCTTTCTCGATAACCATCAGGCTAGGACTGTCATTTGGCACCACACAAACTTCT CTTAACATACAACATAAGCATTGTACGTTTTTTCCCCTTTGATGGTTTCCGTTACCACAAAAAT ACAAAAATTCTAATTTTGCACTGCTGTTGATATTGTTTTTTGGTGAAGCATCAATCGGAGGCAG CTAAATCTGCAGCAGTGCCTTAAGATGAATTTATTTGTGGTTCATAGCTTTCGTTCCTCCTAAG CCTCTATATTGCTTTTCGTAACTTTTGAAAATTAATTGTTTGCTCATGTCATGTCAGTAGTAAT CTTTTATGCAAGTCATGTGAAATTTCTCCTAGCTAGCTTGTCCCTACTAAGACGTTTGAGATGG AGGCAAGTGATTGGTAACGACACTTGTAAGGTCGAGTCTCCAGTACATTGGAAAATAACAGTCA TCTCACTAGGCAAGTACTAGCGCACATATTGGAATTGGATAACATTCCCCAACTTGTGCATCAT TACAGATTTACAGTGATACGCTAATTGTTATCGTGCAACATGATGAATAGCACAGGAACTTTGA TATAGCATGCATCTGTAGTAACAAATGCAACCCGCAAGTTGAGAATACATCCATATATAGGGAA GTGGATTTGGATCCCTCAAGGAAATATTCCCTCGTTGATTGCATGTCACTCAAGTGGTTATGAA AAAAATTGAGAAGATATATTAACATGTGATATATCACTCTACAAACATGCAAATAAAAATTCAA CTTCGACATCTCGTAACGAAAAAAACAAATTTAACTCTGAATATACATTAACTAGCTGTTGTTT AATTTGTATTTTTCATTACAATTTGTAGAAGTTGAACTTGAACTTGTATATTTGTGGAGTGTTA TATCACATGTTAATAGACCTTCTCAATTTTTTTTCAAATTTTTTTATAATCATTTGAATGACAT GCAAATAACTAGGGGATATCCCCGTATATAGTCAGCATGTGTATATATCAATCAGCGATATGAT GGCACATCCACAGTATCCAGAGATCGTACGTATCGTTGCATATGCATACAGTACTGCTAGTACA CTAGTGGATAATTAATGAACTATGTGACAAACGATTGGATTATGTGCAAAAATACTAATAATGT ATTAGTATATGACAAGTGTAATTTCACCACATATCACATACTTCGAGGTATTAAAATTTGTAGT GTAAAATTTTAGTATGTACTATACTTTAAAAATTCTCATACGATTAATTTAAATAATACTAGTT AATTTGGGTGCAGTAGTGACAAATTAAACGTTCCTCTTTGTTAAGGGTACAGGCTATATAGGGT GCGAAGTACAAGGAAGCATATCGATGGTGTTCATATATATATATATATATATATTCATTAATCA AGTGCAAAATTAAGAAGCTGGTGGTGAATTGGTGATGGATTGAGTTCAGTTGTAGACGCAGCTG CCGTCGTCGCTCCTGGCGGTAGGGTCGTAGTTGGCGGCGCGTTGGTCGGTGCATCCCGCCGGCA CGGGGACGGGCGACTGCTGCTCGGCCTTGCCGTAGAACTCGCCGGAGTCGTGGTTGGCGTCTCC GAGCGCCGCCTCGCTGAGGTACTTATCGGCGAGCCGCACCCTCTTGACGTTCTCCTGCTCCCTC ACCAGCATGTGCCGGCCCGTACTCCATCAGCTTGTCGATCGTCATCTTGGGCTGCTCCAACTCG ATCCGGCGGAGTTCACCAGCCTCCTGCCGATGTTCTCCACCCCGATCTCCGCCACCCACCGCCG CACCTCGTCGCCGTACACCCGCGCCCGCAGCGCCCCGAAGAAGTCGATGGGAACGCGTCGGGGA CCTTGTCGCTGCGGAAGATGCCCCTGCACACGCCAATGCGGTCCTCGCGGGTGGGAGCCCAGTA GAACTTGTCCATGCGCCCGTCGCGGATGAGCGGGAGAAGTCGTTGCCGGTGACGATGATGGGGA CGGGGGTTGTACATCCCTGGGAGCTGCACGTTGGTGGGGTTGTCCGCGATGTTCATCAGCGTCG CGTTCACCATCTGGTTGTTCACCGTGTACTGCGTCGTGCCGCCCCGCGTCCAGGTCGTTGATGA ACAGCACGCACATCTTCCCCTTGTTGATCATGTCCGCCGCCTCGCGGTACCGCTGCCGGATCAG CTTCGCGGGCTCTCCGGCGCTCATCATGATGAGG |