Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os06g0554600_circ_g.2 |
ID in PlantcircBase | osa_circ_031122 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 21090493-21090672 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os06g0554600 |
Parent gene annotation |
Conserved hypothetical protein. (Os06t0554600-00) |
Parent gene strand | - |
Alternative splicing | Os06g0554600_circ_g.1 Os06g0554600_circ_g.3 Os06g0554600_circ_g.4 |
Support reads | 3 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | TG-CT |
Number of exons covered | Os06t0554600-00:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.250125602 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2016 |