Plant Circular RNA Database

Detail information of Zm00001d025128_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d025128_circ_g.3
					
						ID in PlantcircBase
						zma_circ_010279
					
						Alias
						zma_circ_0000018, GRMZM2G126545_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr10: 105642818-105646366  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d025128						
					
						Parent gene annotation
						
							 methyl binding domain113
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d025128_circ_g.2 Zm00001d025128_circ_g.4 Zm00001d025128_circ_g.5 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d025128_T006:7
Zm00001d025128_T014:7
Zm00001d025128_T015:7
Zm00001d025128_T010:8
Zm00001d025128_T016:6
Zm00001d025128_T008:6
Zm00001d025128_T007:7
Zm00001d025128_T003:7
Zm00001d025128_T012:7
Zm00001d025128_T004:8
Zm00001d025128_T011:7
Zm00001d025128_T017:7
Zm00001d025128_T013:6
Zm00001d025128_T005:4
Zm00001d025128_T009:7
Zm00001d025128_T002:8
Zm00001d025128_T001:6

General Information
CircRNA Name	Zm00001d025128_circ_g.3
ID in PlantcircBase	zma_circ_010279
Alias	zma_circ_0000018, GRMZM2G126545_C1
Organism	Zea mays
Position	chr10: 105642818-105646366 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d025128
Parent gene annotation	methyl binding domain113
Parent gene strand	-
Alternative splicing	Zm00001d025128_circ_g.2 Zm00001d025128_circ_g.4 Zm00001d025128_circ_g.5
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d025128_T006:7 Zm00001d025128_T014:7 Zm00001d025128_T015:7 Zm00001d025128_T010:8 Zm00001d025128_T016:6 Zm00001d025128_T008:6 Zm00001d025128_T007:7 Zm00001d025128_T003:7 Zm00001d025128_T012:7 Zm00001d025128_T004:8 Zm00001d025128_T011:7 Zm00001d025128_T017:7 Zm00001d025128_T013:6 Zm00001d025128_T005:4 Zm00001d025128_T009:7 Zm00001d025128_T002:8 Zm00001d025128_T001:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATGAACCACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTCAAT
GTGTTGTCATTAGAGATAACCAGGCCATTATTCTCCagtgatttgaagtctgcccattagataa
gtccttgtctaaaacctgtgctctcatgaattttttctttgcttgtccttttgctttcaatctt
ttcaccat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2151
Transcript exons: 105642818-105642926,105643872-105644018,105644135-105644
233,105644322-105645780,105645863-105645988,105646156-10
5646366
AGTGATTTGAAGTCTGCCCATTAGATAAGTCCTTGTCTAAAACCTGTGCTCTCATGAATTTTTT
CTTTGCTTGTCCTTTTGCTTTCAATCTTTTCACCATGCTTTTGGGCAGATCTGCACACTTATCA
AATGAATACATGTCAATGACATTTCTCCTTGGTAAATAGGAATGCCTAGATATTTCTCCGGTTC
CAAGGTAGCTCAATACAGACTTAAGCGTGCGAAATACACGGTGACTAACAGGATCGGTATAGTA
CTGGTCTTTTCTGATTCCATCATTGAACTTTCTAGATATCGTTTCTTTCACCCATCCATCTGGT
AAACCATCAGGATTGAATTCCACATGAGCAAGTATATTATCATCAGTGCTAGTGTCGCACAGCA
CATCCATATCACATGTAGAAACCATGCCCTTATTAACAAAGTGCAATACTTCTGCTTTTGATAA
GAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCATAAGCTTCAAAACAAAAAG
AAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAATTTCCTCCAAGGAACTAAC
ATATCCACCATGCTTTTGATAAGAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAG
GCATAAGCTTCAAAACAAAAAGAAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTT
CAATTTCCTCCAAGGAACTAACATATCCACCATGTAACTAAAACTTCCTCCTCACTCTCAACCT
AACAGCTTTCTTCTGAACGAGCAAAGATTTATACCTCCTGCCCCTACACAAATTAAGTCATGGC
AATTCACTTGTATTCTAACACTCCTGATGCCGAGGCTCTCTCAAGCCTCAGACGTGGAATAAAA
GCAAGCAACAATTATTTTATTTAATTGCGCTAACCAAGATTCGAACTCGAGACTTCAATCTTTT
ATCCAACCAATTCAACCCAAAAGCTCAAGCTGATAGAAGAGATGGGCAATTCACTTGTATTCTA
ACAACACCCACTCTTAAAGACATAAAATTCAACCCTGAATTATAAAAGAGAAGATTTATTTCAA
CCATTCAAACAACTGCAGATGATCCCCTTGAACCCTAGAATTCCATTGATATGGTAACTACGTG
TACAATGTTGATTGATATCATGGTTTATGTTGAGCTGAAAATAATAAGCATTGAGAGAGTCACA
AGTGAACTCCTGCTTTATTTTTTTTCTTTGGATATCTTCTTCCATTCCATCCACAGCTGTGGCA
TTGCCTCACTCACCTAACCCTCCATGACATGTATCCTCTGCATCTATCTGGTAAAACCAGAGGA
TGCTATGAGCCACCATCCAAGGTTGAGGTGACATCAAGCTTCATCACCTTGGCTCCTGACCAAG
CATGCCAGTGTGTGCCTGCAGCCAATACCTACCCCAATTGTTCTTTCGGTTTTGTACTCGCTTT
TAGAAGGGAACATCTTGTCTTGCCAGCTACATCTTATTGGAAGACTGTTGTATTTTTTATATCC
AATATGTATAGTTGCAGTAAAGTACCACACCATATGGATGTAATGAAAGGCCCACACAGGTGAG
CTTATCCGTGAACCTGCAAATATGCTTGATTTTTGTGGGTTCCGCGGAGAACTTCAAAAATTAA
GGCTGTTAGTGGGTTCACGGACAAGCCTCCTTGCATCCCTAGATGTTATTGTGCAACAAATCTC
CAACCTACCTTGTACATTTTGTCCATTTTCTTCCCACCGGCTCTGACTTCAATCACCCACCCAC
GTGGAAGCCATGTATGTGACTCATGAAGCTCGTTGTCCTCGGCGCTTGCCTGCAACTCCAACAT
GCGTTCTTCCACCCCTGAGAAAAGATAATGCAATGTCTCCATCTTTGATGTGAACATGTATCCG
GACATTGGGGAAGTGTAGTACTTGTAGATGGAGCCATTGTCTTCTTGACAAACCTCCATAGTCC
AACCGTCAGGAAGCCAACCCGGCGGCTCATCCAATGACCCAGAATCCTCATTCGACTCATCCAA
TTCATGAACCACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTC
AATGTGTTGTCATTAGAGATAACCAGGCCATTATTCTCC
						
					

						Genomic sequence
						
							AGTGATTTGAAGTCTGCCCATTAGATAAGTCCTTGTCTAAAACCTGTGCTCTCATGAATTTTTT
CTTTGCTTGTCCTTTTGCTTTCAATCTTTTCACCATGCTTTTGGGCTGATGGTACAAGAAAAAA
AATTGCATCATTTGTCAGAAAGAAGAGGTTGAACATCATATCTTGGAGATTATCAAGAAGGTAC
ATATATAAAAGGCATGAAATATAATCTTTTTAGACAACACTCTTGCTAGTCTATGCCATAGTAA
CTAGTAGATGAACATGACAAGTATAGTTTATGGACAACTTTTTAAATCTATTATCTTATTTAAT
TGCGCTGTCCTAACAAAATGCATGTCCTAGAATGTAGGGAGTAATAAGTTAATAGTGTTCAACT
TTGAGATTTGTCTTCCACAAGCAAGTATAATGATAGGACTTATGACTTAGAAACCCAATGAAAC
TTGCCTTTTTTAGCAAATTGAGTGAACCATTTGAAAGTAGTACTCCCTCCATTCCAAATTATAA
AATGTTCTCGCTTTTCTAGATATGTAGTTTTTGTTATGCATTTAGATGTACACTATGTCTACAT
ACATAGGAAAATCAATGTATCTAGAATATCCAAAACATCTTATAATTTAGAATTGAGGGGTTAG
CTAGTAGACATAAGATGACAAAAGGGCCTATGCTAAAACAATAGTTCTGGGAGAAAACAAAATA
CATTGGTATATTTGTATTTGTATTCTATACATTCATAAAACAGATAATTCATAACACTGCTTTG
TTTTGTTAAGAGTACGCAAATTGTAGATTTAGGAAAGCTATGGGCTTTTTTCACAAAAAAGGCC
ATAGCTTTTAAGTATAGTATATCAAAAGCAATGTAGGCTAGCAAATTGAAATTTAGTTTTCTGA
ACCTAGGAAAACTGTATCTAATTCTCTACAGTGCCTGAGCGTATGAAACAAGAGTTGTCAAAAA
CCAAAAAATATCATTTTGCTTTAAGAATTAAAGGTCTCTGAAGGATAATTACACAACCTGACAA
GGACAAATACAATGCGAAAAAAGGAATTACCAGATCTGCACACTTATCAAATGAATACATGTCA
ATGACATTTCTCCTTGGTAAATAGGAATGCCTAGATATTTCTCCGGTTCCAAGGTAGCTCAATA
CAGACTTAAGCGTGCGAAATACACGGTGACTAACAGGATCGGTATAGTACTGCATAATCAAGTT
AGAAATCTTATCAAACTAGGGCTGCTGATGAATAATGAAGGAATAAGCAACTTTTTCAAACATA
CTAGATATAAACGGTTAGATGCACTAGGCTAATGTACCTGGTCTTTTCTGATTCCATCATTGAA
CTTTCTAGATATCGTTTCTTTCACCCATCCATCTGGTAAACCATCAGGATTGAATTCCACATGA
GCAAGTATCTATAAATAAGCTTGAAGGTTAGTTCTGAAGAAAGTTACGAACTTGTAGAGTTCAA
AACAGAAGGAACAATTCCAGCAAGAGCCATACATTATCATCAGTGCTAGTGTCGCACAGCACAT
CCATATCACATGTAGAAACCATGCCCTTATTAACAAAGTGCAATACTTCTGCTTTTGATAAGAA
TCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCATAAGCTTCAAAACAAAAAGAAA
TGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAATTTCCTCCAAGGAACTAACATA
TCCACCATGCTTTTGATAAGAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCA
TAAGCTTCAAAACAAAAAGAAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAA
TTTCCTCCAAGGAACTAACATATCCACCATGTAACTAAAACTTCCTCCTCACTCTCAACCTAAC
AGCTTTCTTCTGAACGAGCAAAGATTTATACCTCCTGCCCCTACACAAATTAAGTCATGGCAAT
TCACTTGTATTCTAACACTCCTGATGCCGAGGCTCTCTCAAGCCTCAGACGTGGAATAAAAGCA
AGCAACAATTATTTTATTTAATTGCGCTAACCAAGATTCGAACTCGAGACTTCAATCTTTTATC
CAACCAATTCAACCCAAAAGCTCAAGCTGATAGAAGAGATGGGCAATTCACTTGTATTCTAACA
ACACCCACTCTTAAAGACATAAAATTCAACCCTGAATTATAAAAGAGAAGATTTATTTCAACCA
TTCAAACAACTGCAGATGATCCCCTTGAACCCTAGAATTCCATTGATATGGTAACTACGTGTAC
AATGTTGATTGATATCATGGTTTATGTTGAGCTGAAAATAATAAGCATTGAGAGAGTCACAAGT
GAACTCCTGCTTTATTTTTTTTCTTTGGATATCTTCTTCCATTCCATCCACAGCTGTGGCATTG
CCTCACTCACCTAACCCTCCATGACATGTATCCTCTGCATCTATCTGGTAAAACCAGAGGATGC
TATGAGCCACCATCCAAGGTTGAGGTGACATCAAGCTTCATCACCTTGGCTCCTGACCAAGCAT
GCCAGTGTGTGCCTGCAGCCAATACCTACCCCAATTGTTCTTTCGGTTTTGTACTCGCTTTTAG
AAGGGAACATCTTGTCTTGCCAGCTACATCTTATTGGAAGACTGTTGTATTTTTTATATCCAAT
ATGTATAGTTGCAGTAAAGTACCACACCATATGGATGTAATGAAAGGCCCACACAGGTGAGCTT
ATCCGTGAACCTGCAAATATGCTTGATTTTTGTGGGTTCCGCGGAGAACTTCAAAAATTAAGGC
TGTTAGTGGGTTCACGGACAAGCCTCCTTGCATCCCTAGATGTTATTGTGCAACAAATCTCCAA
CCTACCTTGTACATTTTGTCCATTTTCTTCCCACCGGCTCTGACTTCAATCACCCACCCACGTG
GAAGCCATGTATGTGACTCCTGCATGCAACAATCAGGAAAGCACATCAGTTTAATCAGCAGTGT
CATACAATATGGCATGACTGAATAAGAATTGACTAACATGAAGCTCGTTGTCCTCGGCGCTTGC
CTGCAACTCCAACATGCGTTCTTCCACCCCTGAGAAAAGATAATGCAATGTCTCCATCTTTGAT
GTGAACATGTATCCGGACATTGGGGAAGTGTAGTACTGCAGAAAACAAGTAACAAATTTTTTCA
CAAATATTAACAAATAAATGTTCTATAAACTCCAGAATCAGGTTTATAAGATCTACACAAACAT
ATGTATGGTCAGCATTTGAAACATCACATGACATATATGTTCATATGCAAGGGCATATGTGGAA
GCATGCATACCTTGTAGATGGAGCCATTGTCTTCTTGACAAACCTCCATAGTCCAACCGTCAGG
AAGCCAACCCGGCGGCTCATCCAATGACCCAGAATCCTCATTCGACTCATCCAATTCATGAACC
ACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTCAATGTGTTGT
CATTAGAGATAACCAGGCCATTATTCTCC
						
					

			
		

Sequences
Splice junction sequence	ATGAACCACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTCAAT GTGTTGTCATTAGAGATAACCAGGCCATTATTCTCCagtgatttgaagtctgcccattagataa gtccttgtctaaaacctgtgctctcatgaattttttctttgcttgtccttttgctttcaatctt ttcaccat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2151 Transcript exons: 105642818-105642926,105643872-105644018,105644135-105644 233,105644322-105645780,105645863-105645988,105646156-10 5646366 AGTGATTTGAAGTCTGCCCATTAGATAAGTCCTTGTCTAAAACCTGTGCTCTCATGAATTTTTT CTTTGCTTGTCCTTTTGCTTTCAATCTTTTCACCATGCTTTTGGGCAGATCTGCACACTTATCA AATGAATACATGTCAATGACATTTCTCCTTGGTAAATAGGAATGCCTAGATATTTCTCCGGTTC CAAGGTAGCTCAATACAGACTTAAGCGTGCGAAATACACGGTGACTAACAGGATCGGTATAGTA CTGGTCTTTTCTGATTCCATCATTGAACTTTCTAGATATCGTTTCTTTCACCCATCCATCTGGT AAACCATCAGGATTGAATTCCACATGAGCAAGTATATTATCATCAGTGCTAGTGTCGCACAGCA CATCCATATCACATGTAGAAACCATGCCCTTATTAACAAAGTGCAATACTTCTGCTTTTGATAA GAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCATAAGCTTCAAAACAAAAAG AAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAATTTCCTCCAAGGAACTAAC ATATCCACCATGCTTTTGATAAGAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAG GCATAAGCTTCAAAACAAAAAGAAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTT CAATTTCCTCCAAGGAACTAACATATCCACCATGTAACTAAAACTTCCTCCTCACTCTCAACCT AACAGCTTTCTTCTGAACGAGCAAAGATTTATACCTCCTGCCCCTACACAAATTAAGTCATGGC AATTCACTTGTATTCTAACACTCCTGATGCCGAGGCTCTCTCAAGCCTCAGACGTGGAATAAAA GCAAGCAACAATTATTTTATTTAATTGCGCTAACCAAGATTCGAACTCGAGACTTCAATCTTTT ATCCAACCAATTCAACCCAAAAGCTCAAGCTGATAGAAGAGATGGGCAATTCACTTGTATTCTA ACAACACCCACTCTTAAAGACATAAAATTCAACCCTGAATTATAAAAGAGAAGATTTATTTCAA CCATTCAAACAACTGCAGATGATCCCCTTGAACCCTAGAATTCCATTGATATGGTAACTACGTG TACAATGTTGATTGATATCATGGTTTATGTTGAGCTGAAAATAATAAGCATTGAGAGAGTCACA AGTGAACTCCTGCTTTATTTTTTTTCTTTGGATATCTTCTTCCATTCCATCCACAGCTGTGGCA TTGCCTCACTCACCTAACCCTCCATGACATGTATCCTCTGCATCTATCTGGTAAAACCAGAGGA TGCTATGAGCCACCATCCAAGGTTGAGGTGACATCAAGCTTCATCACCTTGGCTCCTGACCAAG CATGCCAGTGTGTGCCTGCAGCCAATACCTACCCCAATTGTTCTTTCGGTTTTGTACTCGCTTT TAGAAGGGAACATCTTGTCTTGCCAGCTACATCTTATTGGAAGACTGTTGTATTTTTTATATCC AATATGTATAGTTGCAGTAAAGTACCACACCATATGGATGTAATGAAAGGCCCACACAGGTGAG CTTATCCGTGAACCTGCAAATATGCTTGATTTTTGTGGGTTCCGCGGAGAACTTCAAAAATTAA GGCTGTTAGTGGGTTCACGGACAAGCCTCCTTGCATCCCTAGATGTTATTGTGCAACAAATCTC CAACCTACCTTGTACATTTTGTCCATTTTCTTCCCACCGGCTCTGACTTCAATCACCCACCCAC GTGGAAGCCATGTATGTGACTCATGAAGCTCGTTGTCCTCGGCGCTTGCCTGCAACTCCAACAT GCGTTCTTCCACCCCTGAGAAAAGATAATGCAATGTCTCCATCTTTGATGTGAACATGTATCCG GACATTGGGGAAGTGTAGTACTTGTAGATGGAGCCATTGTCTTCTTGACAAACCTCCATAGTCC AACCGTCAGGAAGCCAACCCGGCGGCTCATCCAATGACCCAGAATCCTCATTCGACTCATCCAA TTCATGAACCACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTC AATGTGTTGTCATTAGAGATAACCAGGCCATTATTCTCC
Genomic sequence	AGTGATTTGAAGTCTGCCCATTAGATAAGTCCTTGTCTAAAACCTGTGCTCTCATGAATTTTTT CTTTGCTTGTCCTTTTGCTTTCAATCTTTTCACCATGCTTTTGGGCTGATGGTACAAGAAAAAA AATTGCATCATTTGTCAGAAAGAAGAGGTTGAACATCATATCTTGGAGATTATCAAGAAGGTAC ATATATAAAAGGCATGAAATATAATCTTTTTAGACAACACTCTTGCTAGTCTATGCCATAGTAA CTAGTAGATGAACATGACAAGTATAGTTTATGGACAACTTTTTAAATCTATTATCTTATTTAAT TGCGCTGTCCTAACAAAATGCATGTCCTAGAATGTAGGGAGTAATAAGTTAATAGTGTTCAACT TTGAGATTTGTCTTCCACAAGCAAGTATAATGATAGGACTTATGACTTAGAAACCCAATGAAAC TTGCCTTTTTTAGCAAATTGAGTGAACCATTTGAAAGTAGTACTCCCTCCATTCCAAATTATAA AATGTTCTCGCTTTTCTAGATATGTAGTTTTTGTTATGCATTTAGATGTACACTATGTCTACAT ACATAGGAAAATCAATGTATCTAGAATATCCAAAACATCTTATAATTTAGAATTGAGGGGTTAG CTAGTAGACATAAGATGACAAAAGGGCCTATGCTAAAACAATAGTTCTGGGAGAAAACAAAATA CATTGGTATATTTGTATTTGTATTCTATACATTCATAAAACAGATAATTCATAACACTGCTTTG TTTTGTTAAGAGTACGCAAATTGTAGATTTAGGAAAGCTATGGGCTTTTTTCACAAAAAAGGCC ATAGCTTTTAAGTATAGTATATCAAAAGCAATGTAGGCTAGCAAATTGAAATTTAGTTTTCTGA ACCTAGGAAAACTGTATCTAATTCTCTACAGTGCCTGAGCGTATGAAACAAGAGTTGTCAAAAA CCAAAAAATATCATTTTGCTTTAAGAATTAAAGGTCTCTGAAGGATAATTACACAACCTGACAA GGACAAATACAATGCGAAAAAAGGAATTACCAGATCTGCACACTTATCAAATGAATACATGTCA ATGACATTTCTCCTTGGTAAATAGGAATGCCTAGATATTTCTCCGGTTCCAAGGTAGCTCAATA CAGACTTAAGCGTGCGAAATACACGGTGACTAACAGGATCGGTATAGTACTGCATAATCAAGTT AGAAATCTTATCAAACTAGGGCTGCTGATGAATAATGAAGGAATAAGCAACTTTTTCAAACATA CTAGATATAAACGGTTAGATGCACTAGGCTAATGTACCTGGTCTTTTCTGATTCCATCATTGAA CTTTCTAGATATCGTTTCTTTCACCCATCCATCTGGTAAACCATCAGGATTGAATTCCACATGA GCAAGTATCTATAAATAAGCTTGAAGGTTAGTTCTGAAGAAAGTTACGAACTTGTAGAGTTCAA AACAGAAGGAACAATTCCAGCAAGAGCCATACATTATCATCAGTGCTAGTGTCGCACAGCACAT CCATATCACATGTAGAAACCATGCCCTTATTAACAAAGTGCAATACTTCTGCTTTTGATAAGAA TCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCATAAGCTTCAAAACAAAAAGAAA TGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAATTTCCTCCAAGGAACTAACATA TCCACCATGCTTTTGATAAGAATCGCTGCCCAGTAGGTAGGTGAACATAAAACTGCAGAAGGCA TAAGCTTCAAAACAAAAAGAAATGTCATATGCTCATATCTCATCTAACGTTTGTGTGACTTCAA TTTCCTCCAAGGAACTAACATATCCACCATGTAACTAAAACTTCCTCCTCACTCTCAACCTAAC AGCTTTCTTCTGAACGAGCAAAGATTTATACCTCCTGCCCCTACACAAATTAAGTCATGGCAAT TCACTTGTATTCTAACACTCCTGATGCCGAGGCTCTCTCAAGCCTCAGACGTGGAATAAAAGCA AGCAACAATTATTTTATTTAATTGCGCTAACCAAGATTCGAACTCGAGACTTCAATCTTTTATC CAACCAATTCAACCCAAAAGCTCAAGCTGATAGAAGAGATGGGCAATTCACTTGTATTCTAACA ACACCCACTCTTAAAGACATAAAATTCAACCCTGAATTATAAAAGAGAAGATTTATTTCAACCA TTCAAACAACTGCAGATGATCCCCTTGAACCCTAGAATTCCATTGATATGGTAACTACGTGTAC AATGTTGATTGATATCATGGTTTATGTTGAGCTGAAAATAATAAGCATTGAGAGAGTCACAAGT GAACTCCTGCTTTATTTTTTTTCTTTGGATATCTTCTTCCATTCCATCCACAGCTGTGGCATTG CCTCACTCACCTAACCCTCCATGACATGTATCCTCTGCATCTATCTGGTAAAACCAGAGGATGC TATGAGCCACCATCCAAGGTTGAGGTGACATCAAGCTTCATCACCTTGGCTCCTGACCAAGCAT GCCAGTGTGTGCCTGCAGCCAATACCTACCCCAATTGTTCTTTCGGTTTTGTACTCGCTTTTAG AAGGGAACATCTTGTCTTGCCAGCTACATCTTATTGGAAGACTGTTGTATTTTTTATATCCAAT ATGTATAGTTGCAGTAAAGTACCACACCATATGGATGTAATGAAAGGCCCACACAGGTGAGCTT ATCCGTGAACCTGCAAATATGCTTGATTTTTGTGGGTTCCGCGGAGAACTTCAAAAATTAAGGC TGTTAGTGGGTTCACGGACAAGCCTCCTTGCATCCCTAGATGTTATTGTGCAACAAATCTCCAA CCTACCTTGTACATTTTGTCCATTTTCTTCCCACCGGCTCTGACTTCAATCACCCACCCACGTG GAAGCCATGTATGTGACTCCTGCATGCAACAATCAGGAAAGCACATCAGTTTAATCAGCAGTGT CATACAATATGGCATGACTGAATAAGAATTGACTAACATGAAGCTCGTTGTCCTCGGCGCTTGC CTGCAACTCCAACATGCGTTCTTCCACCCCTGAGAAAAGATAATGCAATGTCTCCATCTTTGAT GTGAACATGTATCCGGACATTGGGGAAGTGTAGTACTGCAGAAAACAAGTAACAAATTTTTTCA CAAATATTAACAAATAAATGTTCTATAAACTCCAGAATCAGGTTTATAAGATCTACACAAACAT ATGTATGGTCAGCATTTGAAACATCACATGACATATATGTTCATATGCAAGGGCATATGTGGAA GCATGCATACCTTGTAGATGGAGCCATTGTCTTCTTGACAAACCTCCATAGTCCAACCGTCAGG AAGCCAACCCGGCGGCTCATCCAATGACCCAGAATCCTCATTCGACTCATCCAATTCATGAACC ACTAAGACCTCCTTACCTTGCCTCCCCTGTTTTTCTACCTCCACGGTCTGCTTCAATGTGTTGT CATTAGAGATAACCAGGCCATTATTCTCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.131336466

Conservation Information
Conserved circRNAs	NA
PMCS	0.131336466

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							105646196-105646328(-)
						
						Potential amino acid sequence
						
							MEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQASAEDNELHESHTWLPRG
WVIEVRAGGKKMDKMYKVDRCRGYMSWRVSLCLLQFYVHLPTGQRFLSKAEVLHFVNKGMVSTC
DMDVLCDTSTDDNILAHVEFNPDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVL
SYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAKGQAKKKFMRAQVLDKDLSNGQT
SNHWRIMAWLSLMTTH*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	105646196-105646328(-)
Potential amino acid sequence	MEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQASAEDNELHESHTWLPRG WVIEVRAGGKKMDKMYKVDRCRGYMSWRVSLCLLQFYVHLPTGQRFLSKAEVLHFVNKGMVSTC DMDVLCDTSTDDNILAHVEFNPDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVL SYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAKGQAKKKFMRAQVLDKDLSNGQT SNHWRIMAWLSLMTTH*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d025128_circ_g.3

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