Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G03150_circ_g.2 |
ID in PlantcircBase | ath_circ_012649 |
Alias | 2:952313-953167 |
Organism | Arabidpsis thaliana |
Position | chr2: 952313-953167 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT2G03150 |
Parent gene annotation |
ATP/GTP-binding protein family |
Parent gene strand | + |
Alternative splicing | AT2G03150_circ_g.1 AT2G03150_circ_g.3 AT2G03150_circ_g.4 AT2G03150_circ_g.5 AT2G03150_circ_g.6 AT2G03150_circ_g.7 AT2G03150_circ_g.8 |
Support reads | 2 |
Tissues | seedling |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT2G03150.1:3 AT2G03150.2:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.154596267 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |