Detail information of BGIOSGA032263_circ_g.4


General Information
CircRNA Name BGIOSGA032263_circ_g.4
ID in PlantcircBase osi_circ_008803
Alias Chr10:4457478_4462143(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr10: 3495084-3499749  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRCexplorer2
Parent gene BGIOSGA032263
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA032263_circ_g.3 BGIOSGA032263_circ_g.5
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-Yes
Splicing signals   CT-TA
Number of exons covered BGIOSGA032263-TA:7
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ATCTATCTCTCCTGGTCTACTTGGAGCTTGAGGAAGCATGTCAGCATCATTCTCATCAGGTTTG
ATTAAGCCCACATAGCTTTGCCAGTTAAGCCACCAGcctggaatttatcaacaattatagaatc
atttcgagctttatggtaattccagcattcctcagcaagttcttcatcaggacggccatcggca
tcctttgc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CCTGGAATTTATCAACAATTATAGAATCATTTCGAGCTTTATGGTAATTCCAGCATTCCTCAGC
AAGTTCTTCATCAGGACGGCCATCGGCATCCTTTGCTTCAATATATGGTTTCTTTTTCACACGG
TTGAGATCTTCATGCAGACCATCCAATAGAAATGCAAGTAACTCCTGCATAAAAGAGGGGCAAT
AAGTAACAGATCAATCTTCTTTAACAAAATGTGAACAATCTAAATTGCCAAATTTTGTCAAATA
AATATAGCTTATCCAAACAAGAACTAAACGACAAGATGAGGGAGGCACTAATATATCAAAAAGC
ATAATAAACAATCCCTTATTCCGAAAGACACATTTATTAAAGGTTGAAACAGGTAATATTACAC
AATGAAAAAAAAAATGTATGGAGAAATACATCAAGTTCTGAAAACAAGCGAAGCAGGGATGCAT
AAGTAGTGATAAATAGGATGCATCAGTTCACAAAATGACAACAAACTGTATACAAGACGATGAC
GGTTATAAAAGAGAAGATTACAGCAAGGAAGATAACAGGGATGCAATTAAAACAGATTCTAAAG
ATGGAAAACATATTCAGGAAAAGAGCTGAAAACTTGTGTCAATGTGTGGCCAAAAAGGATGCAC
CATTTATCAGAACAGCGAACAAGCCAAAAAGCAGAGACAATTTATCTCTTTGACAGGACATGTT
GATTTATGCTACAAGTCGTTTTGACTTTTTTTCTAGTCAAACTTCTTTAAGTTTGACCAAGTTT
ATATAAAAATTTAGTAACATCTACAACACCAAATTAGTTTCATTAAAACTAACATTTAATATAT
TTTGATAATATGTTTGTTTTATGTTGAAAATGTGTCTACATTTTTCTATAAACTTGGTCTAACT
TAAAAAAGTTTGACTAGGAAAAAAGTCAAAACGACTTATAACAAAAGTTTGAGAAACATAGATA
TAATCATAGTTTGACACAATTTAAATAAACAACCAACACTATGGTTAAAAAACAAATTTCACAA
AACCTCAGGTTTGGAACGATTGTAACGCAAAATCCCAGCTTTTATAATTTGTTTCGAAGAACCC
CAGATTTTTGGCCACACTCTTATACCACTATTTATGCATAACACTTGTACAATAAAATAGTATG
CGGTATTGTTTTTAGTACATGTAAGAATTAGACCTGGGAGTTTTATTACCCAAAACCTAGGGTT
TTGTAATAAAATCTCACAAGAAATTAATGCATATGTACTTCGGAACTGAAATGTGCCTTAACAC
TAACAGTGCACCGGTGTGTTGAAATGAAAATTAACTTCATAGTTCTGGGACACAACAGCATGTT
ATCTTAAAGTAAGAAATATGTTTATAATGTACGACTAATTAATGGAAGTTACAAAACAGAACAA
AGGTGCAAAACTCAGTGTCAGCACCATTTAACAGACATTTATAAGAAGTGTTTAGGAGAAACAT
TCGGAGCAACCTGAGAATCATGTTGATTGTATCCACTGAACTGTGGAGCAAAACGAGAAAGTTT
TGTCTTGAATGGACGTGGAGCTATAGAAGTTCGACCAGCTGACCAAAGTTTTCTCAGTAATTCT
CCAAATGCTGTTGCAAGTTCACCCTGCTCAATGGAGATGTTCTCAGAAATCACCAATAAGATCA
TAAGTTCGCAATCTACATAATAGGACAACATGCATTACCTGTAGCCCAAGTGGATTTTCTGTAT
TTATCTCCCGACTGTAATCCTGTAAAAAGTACTCCACCAATGGAGGTGTATGCACCAAGGATTG
TATAGCACTGTTCATGAAACATGTATTTCCCAAGTTATGTAAACCACTCAGTCCATGGATATCA
TCCTTTGTGCCATTGGAGAAACTATAACCATCTTCTGCGTCCCTTAATAAAGGACTAAAGCTAT
TATCTTGGGAAAAACTGGAACCAAATCCAGATGAAAAACCATTTGAAAATGCAGGACCTCCAGC
AATTGAAAACGATGATGTTGAGGGTTCCAACGGAATTAATGCTAGTTCATTATTTGATCTTGTA
CCAAGATCCGAACACCAAGCATCATCTGCCTTTGCCTCTATGATAATCTGCAAGCATAAAGAAA
GAAGTTGCATCTTCAGTTAATGTACAGACAGAAAATAGAAAATTGTTGGCTTGCCAACAAAATA
GGGGTAAATCGTTAAGAATAATAAGATTCAGGACACCCACAATACAGATAGTGAACATCTTAGA
AGCAATAGTACATATTCATACCAGTACATATTCATACCCGAACATTGCAATGGTGCAAATGTAA
ACCATATTCATATGATAAAACACACTGATCAGAAGCATATTCATATGATAAAGACAAATGAGCC
AACTTTATTAACTCAAAAACAATTCTCATGTCAACCATAATAGAACTTGAAAAGTGCAAATGTA
AATTAAGATAATAAATTAAGCAATATTTAGGAGTTAGACAATTTATGACAAAGTCATTATCCAT
GTGCAAGGTGACATCCTAAGGCAGACAGCAGACCATAGATGAAAAGGGCGCATAGCAACAATAA
CAACAAAAAGCCAGCGACCATCTCGCTGCCAGAATAAAGGAAACAATCATAGGTTTCAGCAGAT
AAAACAATAGATATGTGAATGGGAATTGCATAGTGCATAATACCTCCTGGTCCATCATCAGTTG
AGCTTCCTCAACCGTCTCATTAAGATTTATCAGTTTTTTTCCCTTTGTCTTTTGGTAAAAATCC
CAGATGTCAATCTGAAGCATTAAAGTAGATGGAGCAAAGAATCATATACATAACCATAACTGAC
ACTACAGATAGAGATATTAAATGAATAAATGATGATGCTTGTACCTTAGACTGTTCGACGGACA
AAAGTGAGCAAACCAAGCTATAGAGCTCACTAACTTTGGCCTGAAAGCACCAAATACAAACGTC
AAAAAATAAGTCAAGTCAATTGCACAAGAAACTAGAGTATCCAAGAAAGAAGATAATAGAAAGT
TAACAAATTTACTGTTCAACAAAAGAGTATCTAAGAAAGAAGATAGTAGAAAGTTCATCTTTCT
ACTTTTTTAGTAAAAGTGCTATTAGTTCAAGCAGTTAGTAAAACCAGCATTCAAAGTATTTGCC
ATTGCGCATCAAATTTGTAACATTTTTTTCCTTCTGGTAATAGTCAACCAAAAATATCAGATCA
AATTCTGAAATTCAAGGGCTCAGCATACCAAAGTAGAAGATCGCAACAAGCAGGTGATGAACAG
ATGCGATTTCTTTGACACTTCATCACAAAGAGGGAATCCTCATTGCTTTATTTCATATAATGCA
AATGTGTAAGCACTGGTTTTTATTTGACAAATGTGACTCTCCAACAATGTGATCAAGGTATAAA
GAATGCCTAAACTGATCATCTAACCTATCAAATATAAGAAATGCTCCGATTTGTCCCACACAAT
AAGCACAGATCAAGGAGGCATGATGGCTAAGATAAGCTAATGTGAAATACAACCAAATGTTAAC
CACACAACCTCTTTGAAGCAATAAATTAGGGCTGGATAGTGGAATCATCATTGTAATAACTACA
CTATTGATTTCATCATCAATGGATAACTATGGAGGGACTACATCCCAAAAGAAATGCCAAACAT
TATGAAACCAGGGAAGTTTAAAGGAGCATCAGTCGCATTATTGACGGTTAATTACATATGAAGC
ACAATGTCACAATATAAATCAAATATACCATACCTTTCTACTAATTCTGATAATTCTCTCCAAG
CTGTCTCTTCCATCAAATAATTTCAGACGGAGGGGATAGACATCCACAATGTAACTTCTGGAAG
TTGGACTACTACAAATTACTCTTCTTGAGAGTTCTGGTCCACCTTTGTACCTGAAAAGTATTCA
TGTGTCCATGAGTTGATAATCCCAATTGAAGAAGAATGTATTCAAGTACATTAGGCCATGGACA
TTAGGGATAAGTTATGGTTACACTAGTATTCTGGCATAATCCATTGAAGAGCAACCTGACCTCA
TGAGTGAAAACGCGTACAGTATGCATTTACCAGTTAGCACATCATTGTTTTAAACAAATATCAA
TAGGAAACAGAAAAATTGAATAGGGCAACAACTAATTGCCAACAGACTGAGCAAACAGGACTAC
AAACCAGGCTTTTTTGGTTTGCACCTAAGTGGAGCACATGCAATCTACAATGTGGCATATCAAA
GCCCTGGCAGCCCAAGCTTGGTCAAATGAACAAGAGCGCCTAAAGAAAATAAGAACTAAAAAAA
TGTCGCAAAATGGAACTGTAGTTATATGATCAAATTTTAATCAGGCAACCATTTTCTCTCATGA
CAAAAAGTAAAGAGACAAACCCGTGGTTTTATGGGTACAACAAACTTTCTGACATGAAGGCAGT
TAAACAGACATATAACATTGCATACCATTCATGTAGCTTCCTCCATACTTCCTGGGGCACCAAA
GCGTAGTCATCTCCTTCCCTCAGGGTTCTTTGAAGCTCTGGCTCATCACCAATACTGCTGCTTT
CCTCTGAAACTAGCTTTGAGTTATCTATCTCTCCTGGTCTACTTGGAGCTTGAGGAAGCATGTC
AGCATCATTCTCATCAGGTTTGATTAAGCCCACATAGCTTTGCCAGTTAAGCCACCAG
Conservation Information
Conserved circRNAs osa_circ_006258
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021