Plant Circular RNA Database

Detail information of Os07g0421300_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os07g0421300_circ_g.3
					
						ID in PlantcircBase
						osa_circ_033545
					
						Alias
						Os_ciR919
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 13538899-13542212  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os07g0421300						
					
						Parent gene annotation
						
							Similar to Alpha glucosidase-like protein. (Os07t0421300-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os07g0421300_circ_g.2 Os07g0421300_circ_g.4 Os07g0421300_circ_g.5 Os07g0421300_circ_g.6 						
					
						Support reads
						23/3
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0421300-01:9

General Information
CircRNA Name	Os07g0421300_circ_g.3
ID in PlantcircBase	osa_circ_033545
Alias	Os_ciR919
Organism	Oryza sativa
Position	chr7: 13538899-13542212 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os07g0421300
Parent gene annotation	Similar to Alpha glucosidase-like protein. (Os07t0421300-01)
Parent gene strand	+
Alternative splicing	Os07g0421300_circ_g.2 Os07g0421300_circ_g.4 Os07g0421300_circ_g.5 Os07g0421300_circ_g.6
Support reads	23/3
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0421300-01:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGGAA
CATCTCCACATGAGTATAGCCATGGTTCTTCAGTTGcttccttctgggacatctttctatggta
ctggagaatcaagtgggccacttgagagaactggaaagctggtatgtcatatttttgagaaatt
agtcatta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1086
Transcript exons: 13538899-13538967,13539041-13539178,13539264-13539381,13
539844-13539926,13540500-13540592,13541380-13541548,1354
1635-13541777,13541865-13541951,13542027-13542212
CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAA
AGCTGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATCACTATATCA
GTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTTGCTGACACT
ACTTGCCGCTGTGAGATTGACTTACGGCAAGAATCTACTATGAAATTTTCTGCTTCATGCACTT
ACCCTGTCATACTGTTTGGACCTTTTAATACACCCTCTGAAGTTACCACATCCTTGTCTCATGC
AATTGGAACTGTGTCCATGCCACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTAT
GACTCTTCTGAGAAAGTACTGCAGGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATG
TTGTATGGATGGATATTGATTACATGGATGGTTTTAGGTGCTTTACGTTTAGCCATCGTTTCCC
TGATCCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGAC
CCAGGAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGG
TTCAAAAGGAAGACAAGCAGCCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGTTTTCCCTGA
TTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTTCGTCTCTAATAGC
GTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATACTGCCACCAAAACAATGC
CAGAAAGCAATATCCATAGAGGAGATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCA
TAACGTCTATGGAATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACT
AAACGGCCATTTGTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGA
CTGGTGATAATGTATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG
Transcript length: 230
Transcript exons: 13538899-13538944,13542029-13542212
CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCTATGGAATGCTCATGGC
AAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTTGTTCTTACTCGA
GCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGG
AACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG
						
					

						Genomic sequence
						
							CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAA
AGCTGGTATGTCATATTTTTGAGAAATTAGTCATTAACCTTCTGTTTCCATAAATTTGATCTAT
GAAACATTGGTTAGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATC
ACTATATCAGTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTT
GCTGACACTACTTGCCGCTGTGAGGTATACGTGCTGCATTTCTATAGCTTACTTTGTCCATAAT
TCACTTTTCAGCTATCTCACTAATGAGCATATACTAACATGACAGATTGACTTACGGCAAGAAT
CTACTATGAAATTTTCTGCTTCATGCACTTACCCTGTCATACTGTTTGGACCTTTTAATACACC
CTCTGAAGTTACCACATCCTTGTCTCATGCAATTGGTATATGTCCTGATCATTCTCTTTTCATT
TAAAAGTTTAAACACTTGGGATTTATTATGTGACAAATGTTTTGCAGACATAAAATTTCGTAGT
TATAAATGCGGACTTGTATGGAATTTTTTTTGTGTTAGTATGTTACGAATGTACTTCCATTTAA
CGTGAGTAATTTAGCTAATCTCATAGCATTGTTGAATTATATTTAGTTGTTACTCAATATATCT
GATAGTATTAGTTGTGCATTTCAAGACATTGAATGAGTGATATAACTAGTGTTCTCTACATAGC
ACTAGAACGACTGAAGGTTCCTGTTACTGGATGCCCTGCACATTATTGGAAAAAGACCAAACAT
ATTTTATTTTGTTCTCTATTTAATTGGTACTGTCTGTGTACACAGTTGAAATTTGGATTTTATT
TTACTTGGTTCCACCTACAGATAACCTGAAAGGAAATTCTATTTTGTAGGAACTGTGTCCATGC
CACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTATGACTCTTCTGAGAAAGTACT
GCAGGTATTTTCTTTCCCATTGGATGTTTACAAATTCAATTGTAATATATGTCCCTGAACATCA
ACCTGCAGAATGGTGTCATTGTGTGTCCATGAATTTGAGCACTGTAGATACCTTATTCTATTAT
GTGTTAGCATATCTAAACTCTACTTAATGAGTAATTTTGTAGTCCTTAAGGACGGTACCAGTAG
ATACCATATTTTCTAGTATAAAATTTGGTATCTCTTGGTAAGTCTGGTACTAGGAGGTACCAAA
TTTGCATAAAAAAATTTAGTACCTCTCAAGGACTGTAAAATTTCTCCTAAATCGATAATTAGGG
ATATTACTAGAATTCAGCTCACTCTCAATAAGACATTTGATGTTCACTAATCTTGTTGAAGTTT
TCAGATAACTCAGGAAAACTTTTACTAGATTTGTTTTAAAATTTAAAATGTTATTTGATCAATA
ATTTGGGCTTCATTGAGGCTATACTCCAGAGTTGAGTTGGGAAAGATGCTAGAGGGGTCAAGCA
CATTTATTTTGAAAAGGGCCCAGCGATGATGTTTTAACACTGATATGTTTTTTTTTCTGTTGCA
GGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATGGATGGATATTGATTAC
ATGGATGGTTTTAGGTGCTTTACGTTTAGCGTAAGAACATTTCTGCCCTTTGTCAGTTGATTAT
GTTTCATCTTGTTTGATGCAAAAACTGCAGTGAAGTGTTATTGCTGAATTCTACATGATGTTTC
TGCTTGTACATGTGAAGTAGTAGTATACTGCTGCAAAAGCACCACAGTTCACAGCCTACGTTTA
GATCTAGGGGAGTAAAGTTTTGGCGTGTCACATCGGATATTATATAGGGTGTCGCATGGGGTGT
TTGGGCACTAATAAAAAACTAATTACAGAATCCATCAGTAAACCGCGAGATGAATTTATTAGGC
CTAATTAATCCGTCATTAGCACAGGTTTACTGTAGCACCACATTGTCAAATCATGAAGCAATTA
AGCTTAAAAGATTCGTCTTGCAAATTAGTCGCAATCTGTGCAATTAGTCATTTTTTAGACTATT
TTTTATACTTCATACAGGTGTTCAAACGTTTGATGTGACAGGGTGTAAAGTTTGGGGGTGGGAT
CTAAACTGGGCCTAAATCTATATAAGTTGACTATTCCTCTACTATTGCTGGAATCCTGTTGGCT
GCAAGTTAAATTCAAAGTTTCGGTGACTGCCTTTTGAACTGATGTCCCCAGCTTGCTCTGTTTG
CCCTATTTTTTGTGATTGCTTTATAACTGTTGTCTCCAGGCTGCTCTGTTTGCCCTACTCTTCC
GTACTACATCTAGATTCATTTTTAGATCTAAAATATTTACCTATTGTCTGATAAAATGTTTGTT
TTACCTGAAACTTACCCATTGAATTCATTTGAGATCTGATATTTTACAGCATCGTTTCCCTGAT
CCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGACCCAG
GAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGGTTCA
AAAGGAAGACAAGCAGCCGTTCGTTGGTATATTTCCTCCAATGAATGAACTCCTTCATTACCGT
GATGAACATATCACTAATTGATGGGTCTCTTTTACTCATATTGTGTAGGAGAAGTATGGCCTGG
TGATTGTGTTTTCCCTGATTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGG
CAGTTCGTCTCTAATAGCGTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATG
TACATGATCTGCCATAAATCATTTGTTTTATTTCAACTGGTTTCATCTTGCTCTTCTCTTACAT
TGGAAGTGTTTGTCACATCCAGACTGCCACCAAAACAATGCCAGAAAGCAATATCCATAGAGGA
GATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCATAACGTAACATTTTAACCCTTGG
TAAGCTCACCTACAAAATCTAGTCTGACTTCTAACCTTTTGTTGTATAACTGTCAGGTCTATGG
AATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTT
GTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATG
TATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG
						
					

			
		

Sequences
Splice junction sequence	TGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGGAA CATCTCCACATGAGTATAGCCATGGTTCTTCAGTTGcttccttctgggacatctttctatggta ctggagaatcaagtgggccacttgagagaactggaaagctggtatgtcatatttttgagaaatt agtcatta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1086 Transcript exons: 13538899-13538967,13539041-13539178,13539264-13539381,13 539844-13539926,13540500-13540592,13541380-13541548,1354 1635-13541777,13541865-13541951,13542027-13542212 CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAA AGCTGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATCACTATATCA GTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTTGCTGACACT ACTTGCCGCTGTGAGATTGACTTACGGCAAGAATCTACTATGAAATTTTCTGCTTCATGCACTT ACCCTGTCATACTGTTTGGACCTTTTAATACACCCTCTGAAGTTACCACATCCTTGTCTCATGC AATTGGAACTGTGTCCATGCCACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTAT GACTCTTCTGAGAAAGTACTGCAGGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATG TTGTATGGATGGATATTGATTACATGGATGGTTTTAGGTGCTTTACGTTTAGCCATCGTTTCCC TGATCCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGAC CCAGGAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGG TTCAAAAGGAAGACAAGCAGCCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGTTTTCCCTGA TTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTTCGTCTCTAATAGC GTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATACTGCCACCAAAACAATGC CAGAAAGCAATATCCATAGAGGAGATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCA TAACGTCTATGGAATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACT AAACGGCCATTTGTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGA CTGGTGATAATGTATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG Transcript length: 230 Transcript exons: 13538899-13538944,13542029-13542212 CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCTATGGAATGCTCATGGC AAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTTGTTCTTACTCGA GCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGG AACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG
Genomic sequence	CTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAA AGCTGGTATGTCATATTTTTGAGAAATTAGTCATTAACCTTCTGTTTCCATAAATTTGATCTAT GAAACATTGGTTAGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATC ACTATATCAGTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTT GCTGACACTACTTGCCGCTGTGAGGTATACGTGCTGCATTTCTATAGCTTACTTTGTCCATAAT TCACTTTTCAGCTATCTCACTAATGAGCATATACTAACATGACAGATTGACTTACGGCAAGAAT CTACTATGAAATTTTCTGCTTCATGCACTTACCCTGTCATACTGTTTGGACCTTTTAATACACC CTCTGAAGTTACCACATCCTTGTCTCATGCAATTGGTATATGTCCTGATCATTCTCTTTTCATT TAAAAGTTTAAACACTTGGGATTTATTATGTGACAAATGTTTTGCAGACATAAAATTTCGTAGT TATAAATGCGGACTTGTATGGAATTTTTTTTGTGTTAGTATGTTACGAATGTACTTCCATTTAA CGTGAGTAATTTAGCTAATCTCATAGCATTGTTGAATTATATTTAGTTGTTACTCAATATATCT GATAGTATTAGTTGTGCATTTCAAGACATTGAATGAGTGATATAACTAGTGTTCTCTACATAGC ACTAGAACGACTGAAGGTTCCTGTTACTGGATGCCCTGCACATTATTGGAAAAAGACCAAACAT ATTTTATTTTGTTCTCTATTTAATTGGTACTGTCTGTGTACACAGTTGAAATTTGGATTTTATT TTACTTGGTTCCACCTACAGATAACCTGAAAGGAAATTCTATTTTGTAGGAACTGTGTCCATGC CACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTATGACTCTTCTGAGAAAGTACT GCAGGTATTTTCTTTCCCATTGGATGTTTACAAATTCAATTGTAATATATGTCCCTGAACATCA ACCTGCAGAATGGTGTCATTGTGTGTCCATGAATTTGAGCACTGTAGATACCTTATTCTATTAT GTGTTAGCATATCTAAACTCTACTTAATGAGTAATTTTGTAGTCCTTAAGGACGGTACCAGTAG ATACCATATTTTCTAGTATAAAATTTGGTATCTCTTGGTAAGTCTGGTACTAGGAGGTACCAAA TTTGCATAAAAAAATTTAGTACCTCTCAAGGACTGTAAAATTTCTCCTAAATCGATAATTAGGG ATATTACTAGAATTCAGCTCACTCTCAATAAGACATTTGATGTTCACTAATCTTGTTGAAGTTT TCAGATAACTCAGGAAAACTTTTACTAGATTTGTTTTAAAATTTAAAATGTTATTTGATCAATA ATTTGGGCTTCATTGAGGCTATACTCCAGAGTTGAGTTGGGAAAGATGCTAGAGGGGTCAAGCA CATTTATTTTGAAAAGGGCCCAGCGATGATGTTTTAACACTGATATGTTTTTTTTTCTGTTGCA GGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATGGATGGATATTGATTAC ATGGATGGTTTTAGGTGCTTTACGTTTAGCGTAAGAACATTTCTGCCCTTTGTCAGTTGATTAT GTTTCATCTTGTTTGATGCAAAAACTGCAGTGAAGTGTTATTGCTGAATTCTACATGATGTTTC TGCTTGTACATGTGAAGTAGTAGTATACTGCTGCAAAAGCACCACAGTTCACAGCCTACGTTTA GATCTAGGGGAGTAAAGTTTTGGCGTGTCACATCGGATATTATATAGGGTGTCGCATGGGGTGT TTGGGCACTAATAAAAAACTAATTACAGAATCCATCAGTAAACCGCGAGATGAATTTATTAGGC CTAATTAATCCGTCATTAGCACAGGTTTACTGTAGCACCACATTGTCAAATCATGAAGCAATTA AGCTTAAAAGATTCGTCTTGCAAATTAGTCGCAATCTGTGCAATTAGTCATTTTTTAGACTATT TTTTATACTTCATACAGGTGTTCAAACGTTTGATGTGACAGGGTGTAAAGTTTGGGGGTGGGAT CTAAACTGGGCCTAAATCTATATAAGTTGACTATTCCTCTACTATTGCTGGAATCCTGTTGGCT GCAAGTTAAATTCAAAGTTTCGGTGACTGCCTTTTGAACTGATGTCCCCAGCTTGCTCTGTTTG CCCTATTTTTTGTGATTGCTTTATAACTGTTGTCTCCAGGCTGCTCTGTTTGCCCTACTCTTCC GTACTACATCTAGATTCATTTTTAGATCTAAAATATTTACCTATTGTCTGATAAAATGTTTGTT TTACCTGAAACTTACCCATTGAATTCATTTGAGATCTGATATTTTACAGCATCGTTTCCCTGAT CCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGACCCAG GAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGGTTCA AAAGGAAGACAAGCAGCCGTTCGTTGGTATATTTCCTCCAATGAATGAACTCCTTCATTACCGT GATGAACATATCACTAATTGATGGGTCTCTTTTACTCATATTGTGTAGGAGAAGTATGGCCTGG TGATTGTGTTTTCCCTGATTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGG CAGTTCGTCTCTAATAGCGTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATG TACATGATCTGCCATAAATCATTTGTTTTATTTCAACTGGTTTCATCTTGCTCTTCTCTTACAT TGGAAGTGTTTGTCACATCCAGACTGCCACCAAAACAATGCCAGAAAGCAATATCCATAGAGGA GATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCATAACGTAACATTTTAACCCTTGG TAAGCTCACCTACAAAATCTAGTCTGACTTCTAACCTTTTGTTGTATAACTGTCAGGTCTATGG AATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTT GTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATG TATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_016990 						
					
						PMCS
						0.216537829

Conservation Information
Conserved circRNAs	osi_circ_016990
PMCS	0.216537829

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							13539289-13542209(+)
13538916-13542144(-)
						
					

						Potential amino acid sequence
						
							MKFSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTF
RERGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFD
SGLESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAV
FNTATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIG
QQRYAAMWTGDNVSNWEHLHMSIAMVLQLLPSGTSFYGTGESSGPLERTGKLVITWNTDAWDYG
PGTTSLYQSHPWVLAVLPDGKALGVLADTTCRCEIDLRQESTMKFSASCTYPVILFGPFNTPSE
VTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTFRERGIPCDVVWMDIDYMDGFRC
FTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFDSGLESDVWVQKEDKQPFVGEVW
PGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAVFNTATKTMPESNIHRGDANIGG
LQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMS
IAMVLQLLPSGTSFYGTGESSGPLERTGKLVITWNTDAWDYGPGTTSLYQSHPWVLAVLPDGKA
LGVLADTTCRCEIDLRQESTMKFSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGY
HQCRYSYDSSEKVLQVVKTFRERGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGC
KAIWMLDPGIKNESGYFVFDSGLESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLV
RQFVSNSVDGLWNDMNEPAVFNTATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEG
MKLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMSIAMVLQLLPSGTSFYGTGESSG
PLERTGKLVITWNTDAWDYGPGTTSLYQSHPWVLAVLPDGKALGVLADTTCRCEIDLRQESTMK
FSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTFRE
RGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFDSG
LESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAVFN
TATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIGQQ
RYAAMWTGDNVSNWEHLHMSIAMVLQL(+)
MSQKEATEEPWLYSCGDVPSLIHYHQST*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	13539289-13542209(+) 13538916-13542144(-)
Potential amino acid sequence	MKFSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTF RERGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFD SGLESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAV FNTATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIG QQRYAAMWTGDNVSNWEHLHMSIAMVLQLLPSGTSFYGTGESSGPLERTGKLVITWNTDAWDYG PGTTSLYQSHPWVLAVLPDGKALGVLADTTCRCEIDLRQESTMKFSASCTYPVILFGPFNTPSE VTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTFRERGIPCDVVWMDIDYMDGFRC FTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFDSGLESDVWVQKEDKQPFVGEVW PGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAVFNTATKTMPESNIHRGDANIGG LQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMS IAMVLQLLPSGTSFYGTGESSGPLERTGKLVITWNTDAWDYGPGTTSLYQSHPWVLAVLPDGKA LGVLADTTCRCEIDLRQESTMKFSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGY HQCRYSYDSSEKVLQVVKTFRERGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGC KAIWMLDPGIKNESGYFVFDSGLESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLV RQFVSNSVDGLWNDMNEPAVFNTATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEG MKLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMSIAMVLQLLPSGTSFYGTGESSG PLERTGKLVITWNTDAWDYGPGTTSLYQSHPWVLAVLPDGKALGVLADTTCRCEIDLRQESTMK FSASCTYPVILFGPFNTPSEVTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTFRE RGIPCDVVWMDIDYMDGFRCFTFSHRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFDSG LESDVWVQKEDKQPFVGEVWPGDCVFPDFTCERARSWWSGLVRQFVSNSVDGLWNDMNEPAVFN TATKTMPESNIHRGDANIGGLQNHPYYHNVYGMLMAKSTYEGMKLANPTKRPFVLTRAGFIGQQ RYAAMWTGDNVSNWEHLHMSIAMVLQL(+) MSQKEATEEPWLYSCGDVPSLIHYHQST*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os07g0421300_circ_g.3

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