Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0442000_circ_g.9 |
ID in PlantcircBase | osa_circ_023940 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 22009244-22009537 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os04g0442000 |
Parent gene annotation |
Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1- BP). (Os04t0442000-01) |
Parent gene strand | + |
Alternative splicing | Os04g0442000_circ_g.4 Os04g0442000_circ_g.5 Os04g0442000_circ_g.6 Os04g0442000_circ_g.7 Os04g0442000_circ_g.8 Os04g0442000_circ_g.10 Os04g0442000_circ_g.11 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | AA-AG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.244206066 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |