Plant Circular RNA Database

Detail information of BGIOSGA004748_circ_g.5

			
						 General Information
					
						CircRNA Name
						BGIOSGA004748_circ_g.5
					
						ID in PlantcircBase
						osi_circ_002515
					
						Alias
						1:39173492|39178043
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr1: 39173492-39178043  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA004748						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							BGIOSGA004748_circ_g.1 BGIOSGA004748_circ_g.2 BGIOSGA004748_circ_g.3 BGIOSGA004748_circ_g.4 BGIOSGA004748_circ_g.6 BGIOSGA004748_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA004748-TA:9

General Information
CircRNA Name	BGIOSGA004748_circ_g.5
ID in PlantcircBase	osi_circ_002515
Alias	1:39173492\|39178043
Organism	Oryza sativa ssp. indica
Position	chr1: 39173492-39178043 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA004748
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	BGIOSGA004748_circ_g.1 BGIOSGA004748_circ_g.2 BGIOSGA004748_circ_g.3 BGIOSGA004748_circ_g.4 BGIOSGA004748_circ_g.6 BGIOSGA004748_circ_g.7
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA004748-TA:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTACTCTCCGTTCAGATACTTTTGTTGCTTATGGCTATTGTAGCTGTTCCGTGGATGCTCTTC
CCAAAGCCTTTTATCTTGAAGAAACTTCACAAGGAGgtagagaaaactgttttcgtagttttct
tttctggggatcaggctaaagcaaaaatattaaagatttgcggttcatttggagcaagttgcta
ccctgttc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTAGAGAAAACTGTTTTCGTAGTTTTCTTTTCTGGGGATCAGGCTAAAGCAAAAATATTAAAGA
TTTGCGGTTCATTTGGAGCAAGTTGCTACCCTGTTCCCGAGGAGATGGTTAAGCAGAGACAGAT
TTTTCGCGAGGTACTTTAATTTGCATATTTGGCACACAAATTCACTGCTTGATTTGACCGTGCT
TGTTAGAATTTTATTGGAAGAAGCTTGAGTGTTATACTTATCTGACTTATTGTTCTCGTTATTT
TGTGTCATAATGTTAATATGTTATCTGCTGAGATATTATGTAGTAGTAACGGTTTATGAAAATG
TGTCAGGTATCTGGACGCCTTGCTGATCTGGAAGCCACTTTGGATGCTGGAATCCAGCACAGAA
ACAAAGCACTAGAGTCAGTAGGTTCACAATTATGGAGGTGGACAATCATGGTAATGAAGTAATA
TAAAATTTTCATTTTCTATTTGTGCGTTGTAATCCCTAAAATCTCTTATTTATGTCTGTTCTGA
TACATGGATTTCTGAACCATAACCCCCTTTTGTGTTAGGTGAAAAAAGAGAAAGCTGTATATGA
TACATTGAACATGCTGAATTTTGATGTCACGAAGAAATGCCTTGTTGGGGAAGGATGGTGTCCT
ATATTTGCTAAATCACAGGTCAGAAATATTACATTCATTTGAAGGTCTATTCATTGTGCTCATT
CTGTTTAGGATACTTTTAAGGATATATATCTTATCTCTACTTTGTACTTCAGATCAAGGATGTT
TTGCAGCGTGCAACGCTTCACAGTAATTCACAAGTTGGAATAATATTTCATGAGATGGACACTA
TTGATTCACCGCCTACATATTTCCAAACCGATAAGTTCACTAACGCTTTCCAGGAGATAGTTGA
CGCATATGGGTATGCACTTTGTTGCAAGTGTCAACTTGAATAAATGAAATTCATATGCTTTCTG
TTTTTATGATTCATGAACTGAGTATTCGTGGGTATATGTTTTTCAAATGTTAAATTTCTTGAGC
AAAGCAGTTGTTAAATCATGTGTACTACTAGCTACTTGATCCAGGTTTCAGCTATCCGACACAA
ATATTTTGCTGCTATATTTTGAAGTTCTTCACTTTTGGGTTTGATTTTGAGGTTGGTGAGCAAG
AGCTAAAATATTAGTTTTAGGGACAGAGGTAGTAATTAATAATGTTGACTTCTTTAGTGTGCAC
ATTTTGCTAGCTCTGTTTGCCTTTGTAACTAGACAACCTGACCATAAAAAACAGATTGATTCAT
TAAACATTGGAAGGTTGTCTGATACTTTGACATACTTGCTTTATGATGTGATCTATTTTTAATC
CTTAGGCCCTACTTTTTAATGATATTTTAGTCATGCAACTTTGGTAGTGTGCTAATCATGAACT
TCTTGCAGTATTGCTCGATATGAGGAAGCTAATCCAGCTGTCTATTCTGTCATCACATTCCCAT
TTCTTTTTGCTGTGATGTTTGGAGATTGGGGTCATGGTATATGTCTATTGTTAGGAGCATGTGT
TCTTATACTTCGTGAGAAGAAACTTTCCTCTCAGGTATTTTTTTTGGCTAAATTTGAACCGTTC
ATTCCTGTTTTGGTATAATATTACATACAAATCTGGAAGTGTGAAGTTTAGGTAGCTGATTGAT
CGTGATCTTATTTCCGCTAGTTTGAATTGCACAGTTATAATTTAGTTATCTCTACCATTCCCAG
TGCGCTGTGTTGGCTTTCTTTTGCTATTATTGCTCCCTTCTATGCTATGCTAACCACTTGGTAG
GTTTTTAATAACTGAGTTGTGAAGTGAAGTGAAGGAGTAGACCATATTCTTTCATGATTACCAC
CTTGGCATCAATGAGTTGATAAAATTTTTTGTTATCATTCGTAAGACAATATTAAACTGTTATG
GGTAAATTCCAAATAGACTCCCATATATAATGGAGAAATTTTAATGACCCCAAGGATTATTATC
AATTCCTTTCTGTGGACATCAATCTAATTTCTGGCAGAGGTATTTTATGGTGCATGGATATCTA
TGTACCATGTGCTAGGGATCCAAAACAATTGCAAATTTTTGGAATCACATTATGTGGTTTTTAT
CATTATATTAATGCTCAATGGCATGATAAATCAAATCAAGTAGTCCAGAACAGCCCTTAAGCTA
GTACATCTAATACTAATAAAATACACAGTGAACATGAATTTTGAGCATAGCAATTTTGCTATGT
CCTCAATTTATTGGTAAAAAATAGTTATATTTCTTGCTGGAATTCGTCCAATCCTTCTTGGACA
TGTGTTGAAGCTTTGCCAGAGGAGTGACTTTACCCATGCACCTGAAAATTTGTGGATAAACCAT
TCAGTTATGTTATATTTACTTGAGTGTCCAGAAAATCCCTCTTATAATGTAGAAGGAATCCACT
GTAATATCTCCAACCAATGCTTATAGTTTTGTTGCTGCCAGAAACTGCCTGGATTTAACTCCAC
ATCTGGTTTATAAATTTTGTTGATGTGAATATTTCCTTCTAGATCTGCTCACACTTGAAAGGTG
TTGTTTGCTTTTAAGTTTTAATAACTCTGCAATTTATCCATTTTTGTATATTGCCTGCACTAAC
ATTCAGCATGCTCCATTACCTCAGAAGCTTGGTAGCTTTATGGAGATGGCATTTGGTGGGCGTT
ATGTTATCCTTCTGATGGCATTGTTCTCAATATACTGTGGGCTTATATACAATGAGTTTTTCTC
AGTTCCATTTCATATATTCGGGAAATCAGCGTATGAATGTCGAGAGAAAACCTGCAGGTACTAA
TAATTATTTGGATTTGCTTTTAGTCTGCTGCAAATTATTTGAATTTTACAAACCTAGTTCATTA
TGCTTCTAGTCTGCTGCAACAGATAGTACTTTGCTAGCTCATCAGTTCGTACAACCTACATCTC
TAGGCCTTTAGGGTAAGGATAAGGAGTAACATTTTGTTTCCTTACTGCTGAGAATACCTATTGC
CGAGTATGTATAATGTAGTAATGTACACAGAAAATACACTTATGTACTGAAAGCGTATATATGA
TTATCTTTCGAACCAGAAAAGCTATACGCAGCATGCAATTAAACACACATGCAGCTGGACATTT
TTGATGCTTGGACCTCTCTATCTTAAAGTGATGTTTCTATAGCTCTGATCACGACTCATAAGAA
ATGGTTTCCTTCTACACATTATCTGGTACAGGTCATGATCATTATGTGCTGTCATTGTGTTATT
CCTGTAATAAGCAAATCTTGTTATTCGGATGGCCTAATCAGCCAAAGAAAAAGCCAAATTTTGA
ATTTTCAAGCTTAATTTTGAGATTGATTTTGAGATATTTTCAACGTAGTTTCTTTTTCAACATT
GGCTTTTAAGTCACCAAGAACACATTTATAAAATTTTTACCTACAAATTCATTTTTATTTCCTA
ATAAGTCGTTTTGGCTTATTAGGAAATAAGCCAAACGATGGGGACCAAACTTGCATGGTGCCCA
AGAGTTGCAACAGTTTTTAAATAAATATATATCATATATTCAAATTTTAAAATTCTAAAAACGA
TTTTCTTCAAATGTAATTATGTAAAACTAAATAAAATCATATCAACTGGGCATCTACATATACA
CTTGTTTAAATAGATTCACCCTGAAAAGCAACGTAGTGTGTCTTGTTTGAAGTCTAGATTATAC
CCATTTCATTTACATTTTTGGAAGGGCGGGTATTTAAAGAAGTATATTGAGTTAATATTACATC
AGATGGGTAAAGTAGGTCAACGAAGCACTCTACCATTGCAATACAGCTTATTGTCAGATGAGAG
ATGACCAGCTGTATCAAAGATTTGTCCCTGAAGATCTAATATTCTGACCTGTGTGATTCAGTGA
TGCACATACTGCTGGGCTCATTAAAGTCCGTGATCCCTATCCTTTTGGAGTGGACCCAAGTTGG
CGTGGAAGTCGATCTGAGCTACCCTTTCTAAACTCCTTGAAGATGAAGATGTCTATACTAATGG
GTGTAACCCAGATGAACTTGGGGATTGTATTGAGTTATTTTGATGCAAAGTTTCATGGAAATGC
TCTTGACATAAGGTGCTGTATTTTGTTTGCATAGTTTTCTTCTTTTGCTGCAAGCTAATTGAAG
GGGAGGATAAGGGCGATCTTTTTAACTGTGTGAGTTCCTCAGGTATCAATTCATACCACAGATG
ATCTTTCTGAACAGCCTCTTTGGCTACTTAGCACTCCTAATTCTCATCAAGTGGTGCACGGGCT
CTCAAGCTGACCTATATCATGTGATGATATATATGTTCCTTGATCCTTCTGGCAATCTTGGAGA
AAATCAACTATTTTGGGGCCAGAAGGAACTTCAGGTTTGTATAACCTTTTATTAACAAGAAAAA
GGCTTCACTACCTCATTTTCCTGCCAGCTAACAATTATTACTCTCCGTTCAGATACTTTTGTTG
CTTATGGCTATTGTAGCTGTTCCGTGGATGCTCTTCCCAAAGCCTTTTATCTTGAAGAAACTTC
ACAAGGAG
						
					

			
		

Sequences
Splice junction sequence	ATTACTCTCCGTTCAGATACTTTTGTTGCTTATGGCTATTGTAGCTGTTCCGTGGATGCTCTTC CCAAAGCCTTTTATCTTGAAGAAACTTCACAAGGAGgtagagaaaactgttttcgtagttttct tttctggggatcaggctaaagcaaaaatattaaagatttgcggttcatttggagcaagttgcta ccctgttc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTAGAGAAAACTGTTTTCGTAGTTTTCTTTTCTGGGGATCAGGCTAAAGCAAAAATATTAAAGA TTTGCGGTTCATTTGGAGCAAGTTGCTACCCTGTTCCCGAGGAGATGGTTAAGCAGAGACAGAT TTTTCGCGAGGTACTTTAATTTGCATATTTGGCACACAAATTCACTGCTTGATTTGACCGTGCT TGTTAGAATTTTATTGGAAGAAGCTTGAGTGTTATACTTATCTGACTTATTGTTCTCGTTATTT TGTGTCATAATGTTAATATGTTATCTGCTGAGATATTATGTAGTAGTAACGGTTTATGAAAATG TGTCAGGTATCTGGACGCCTTGCTGATCTGGAAGCCACTTTGGATGCTGGAATCCAGCACAGAA ACAAAGCACTAGAGTCAGTAGGTTCACAATTATGGAGGTGGACAATCATGGTAATGAAGTAATA TAAAATTTTCATTTTCTATTTGTGCGTTGTAATCCCTAAAATCTCTTATTTATGTCTGTTCTGA TACATGGATTTCTGAACCATAACCCCCTTTTGTGTTAGGTGAAAAAAGAGAAAGCTGTATATGA TACATTGAACATGCTGAATTTTGATGTCACGAAGAAATGCCTTGTTGGGGAAGGATGGTGTCCT ATATTTGCTAAATCACAGGTCAGAAATATTACATTCATTTGAAGGTCTATTCATTGTGCTCATT CTGTTTAGGATACTTTTAAGGATATATATCTTATCTCTACTTTGTACTTCAGATCAAGGATGTT TTGCAGCGTGCAACGCTTCACAGTAATTCACAAGTTGGAATAATATTTCATGAGATGGACACTA TTGATTCACCGCCTACATATTTCCAAACCGATAAGTTCACTAACGCTTTCCAGGAGATAGTTGA CGCATATGGGTATGCACTTTGTTGCAAGTGTCAACTTGAATAAATGAAATTCATATGCTTTCTG TTTTTATGATTCATGAACTGAGTATTCGTGGGTATATGTTTTTCAAATGTTAAATTTCTTGAGC AAAGCAGTTGTTAAATCATGTGTACTACTAGCTACTTGATCCAGGTTTCAGCTATCCGACACAA ATATTTTGCTGCTATATTTTGAAGTTCTTCACTTTTGGGTTTGATTTTGAGGTTGGTGAGCAAG AGCTAAAATATTAGTTTTAGGGACAGAGGTAGTAATTAATAATGTTGACTTCTTTAGTGTGCAC ATTTTGCTAGCTCTGTTTGCCTTTGTAACTAGACAACCTGACCATAAAAAACAGATTGATTCAT TAAACATTGGAAGGTTGTCTGATACTTTGACATACTTGCTTTATGATGTGATCTATTTTTAATC CTTAGGCCCTACTTTTTAATGATATTTTAGTCATGCAACTTTGGTAGTGTGCTAATCATGAACT TCTTGCAGTATTGCTCGATATGAGGAAGCTAATCCAGCTGTCTATTCTGTCATCACATTCCCAT TTCTTTTTGCTGTGATGTTTGGAGATTGGGGTCATGGTATATGTCTATTGTTAGGAGCATGTGT TCTTATACTTCGTGAGAAGAAACTTTCCTCTCAGGTATTTTTTTTGGCTAAATTTGAACCGTTC ATTCCTGTTTTGGTATAATATTACATACAAATCTGGAAGTGTGAAGTTTAGGTAGCTGATTGAT CGTGATCTTATTTCCGCTAGTTTGAATTGCACAGTTATAATTTAGTTATCTCTACCATTCCCAG TGCGCTGTGTTGGCTTTCTTTTGCTATTATTGCTCCCTTCTATGCTATGCTAACCACTTGGTAG GTTTTTAATAACTGAGTTGTGAAGTGAAGTGAAGGAGTAGACCATATTCTTTCATGATTACCAC CTTGGCATCAATGAGTTGATAAAATTTTTTGTTATCATTCGTAAGACAATATTAAACTGTTATG GGTAAATTCCAAATAGACTCCCATATATAATGGAGAAATTTTAATGACCCCAAGGATTATTATC AATTCCTTTCTGTGGACATCAATCTAATTTCTGGCAGAGGTATTTTATGGTGCATGGATATCTA TGTACCATGTGCTAGGGATCCAAAACAATTGCAAATTTTTGGAATCACATTATGTGGTTTTTAT CATTATATTAATGCTCAATGGCATGATAAATCAAATCAAGTAGTCCAGAACAGCCCTTAAGCTA GTACATCTAATACTAATAAAATACACAGTGAACATGAATTTTGAGCATAGCAATTTTGCTATGT CCTCAATTTATTGGTAAAAAATAGTTATATTTCTTGCTGGAATTCGTCCAATCCTTCTTGGACA TGTGTTGAAGCTTTGCCAGAGGAGTGACTTTACCCATGCACCTGAAAATTTGTGGATAAACCAT TCAGTTATGTTATATTTACTTGAGTGTCCAGAAAATCCCTCTTATAATGTAGAAGGAATCCACT GTAATATCTCCAACCAATGCTTATAGTTTTGTTGCTGCCAGAAACTGCCTGGATTTAACTCCAC ATCTGGTTTATAAATTTTGTTGATGTGAATATTTCCTTCTAGATCTGCTCACACTTGAAAGGTG TTGTTTGCTTTTAAGTTTTAATAACTCTGCAATTTATCCATTTTTGTATATTGCCTGCACTAAC ATTCAGCATGCTCCATTACCTCAGAAGCTTGGTAGCTTTATGGAGATGGCATTTGGTGGGCGTT ATGTTATCCTTCTGATGGCATTGTTCTCAATATACTGTGGGCTTATATACAATGAGTTTTTCTC AGTTCCATTTCATATATTCGGGAAATCAGCGTATGAATGTCGAGAGAAAACCTGCAGGTACTAA TAATTATTTGGATTTGCTTTTAGTCTGCTGCAAATTATTTGAATTTTACAAACCTAGTTCATTA TGCTTCTAGTCTGCTGCAACAGATAGTACTTTGCTAGCTCATCAGTTCGTACAACCTACATCTC TAGGCCTTTAGGGTAAGGATAAGGAGTAACATTTTGTTTCCTTACTGCTGAGAATACCTATTGC CGAGTATGTATAATGTAGTAATGTACACAGAAAATACACTTATGTACTGAAAGCGTATATATGA TTATCTTTCGAACCAGAAAAGCTATACGCAGCATGCAATTAAACACACATGCAGCTGGACATTT TTGATGCTTGGACCTCTCTATCTTAAAGTGATGTTTCTATAGCTCTGATCACGACTCATAAGAA ATGGTTTCCTTCTACACATTATCTGGTACAGGTCATGATCATTATGTGCTGTCATTGTGTTATT CCTGTAATAAGCAAATCTTGTTATTCGGATGGCCTAATCAGCCAAAGAAAAAGCCAAATTTTGA ATTTTCAAGCTTAATTTTGAGATTGATTTTGAGATATTTTCAACGTAGTTTCTTTTTCAACATT GGCTTTTAAGTCACCAAGAACACATTTATAAAATTTTTACCTACAAATTCATTTTTATTTCCTA ATAAGTCGTTTTGGCTTATTAGGAAATAAGCCAAACGATGGGGACCAAACTTGCATGGTGCCCA AGAGTTGCAACAGTTTTTAAATAAATATATATCATATATTCAAATTTTAAAATTCTAAAAACGA TTTTCTTCAAATGTAATTATGTAAAACTAAATAAAATCATATCAACTGGGCATCTACATATACA CTTGTTTAAATAGATTCACCCTGAAAAGCAACGTAGTGTGTCTTGTTTGAAGTCTAGATTATAC CCATTTCATTTACATTTTTGGAAGGGCGGGTATTTAAAGAAGTATATTGAGTTAATATTACATC AGATGGGTAAAGTAGGTCAACGAAGCACTCTACCATTGCAATACAGCTTATTGTCAGATGAGAG ATGACCAGCTGTATCAAAGATTTGTCCCTGAAGATCTAATATTCTGACCTGTGTGATTCAGTGA TGCACATACTGCTGGGCTCATTAAAGTCCGTGATCCCTATCCTTTTGGAGTGGACCCAAGTTGG CGTGGAAGTCGATCTGAGCTACCCTTTCTAAACTCCTTGAAGATGAAGATGTCTATACTAATGG GTGTAACCCAGATGAACTTGGGGATTGTATTGAGTTATTTTGATGCAAAGTTTCATGGAAATGC TCTTGACATAAGGTGCTGTATTTTGTTTGCATAGTTTTCTTCTTTTGCTGCAAGCTAATTGAAG GGGAGGATAAGGGCGATCTTTTTAACTGTGTGAGTTCCTCAGGTATCAATTCATACCACAGATG ATCTTTCTGAACAGCCTCTTTGGCTACTTAGCACTCCTAATTCTCATCAAGTGGTGCACGGGCT CTCAAGCTGACCTATATCATGTGATGATATATATGTTCCTTGATCCTTCTGGCAATCTTGGAGA AAATCAACTATTTTGGGGCCAGAAGGAACTTCAGGTTTGTATAACCTTTTATTAACAAGAAAAA GGCTTCACTACCTCATTTTCCTGCCAGCTAACAATTATTACTCTCCGTTCAGATACTTTTGTTG CTTATGGCTATTGTAGCTGTTCCGTGGATGCTCTTCCCAAAGCCTTTTATCTTGAAGAAACTTC ACAAGGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							39173601-39178040(+)
						
					

						Potential amino acid sequence
						
							MVKQRQIFREVSGRLADLEATLDAGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDV
TKKCLVGEGWCPIFAKSQIKDVLQRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIV
DAYGIARYEEANPAVYSVITFPFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGSFMEMA
FGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVD
PSWRGSRSELPFLNSLKMKMSILMGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALLILIKWC
TGSQADLYHVMIYMFLDPSGNLGENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILKKLHKEV
EKTVFVVFFSGDQAKAKILKICGSFGASCYPVPEEMVKQRQIFREVSGRLADLEATLDAGIQHR
NKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIKDVLQRATLH
SNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIVDAYGIARYEEANPAVYSVITFPFLFAVMF
GDWGHGICLLLGACVLILREKKLSSQKLGSFMEMAFGGRYVILLMALFSIYCGLIYNEFFSVPF
HIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILMGVTQM
NLGIVLSYFDAKFHGNALDISLFGYLALLILIKWCTGSQADLYHVMIYMFLDPSGNLGENQLFW
GQKELQILLLLMAIVAVPWMLFPKPFILKKLHKEVEKTVFVVFFSGDQAKAKILKICGSFGASC
YPVPEEMVKQRQIFREVSGRLADLEATLDAGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLN
MLNFDVTKKCLVGEGWCPIFAKSQIKDVLQRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTN
AFQEIVDAYGIARYEEANPAVYSVITFPFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLG
SFMEMAFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDP
YPFGVDPSWRGSRSELPFLNSLKMKMSILMGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALL
ILIKWCTGSQADLYHVMIYMFLDPSGNLGENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILK
KLHKEVEKTVFVVFFSGDQAKAKILKICGSFGASCYPVPEEMVKQRQIFREVSGRLADLEATLD
AGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIKDVL
QRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIVDAYGIARYEEANPAVYSVITFPF
LFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGSFMEMAFGGRYVILLMALFSIYCGLIYNE
FFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVDPSWRGSRSELPFLNSLKMKMSIL
MGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALLILIKWCTGSQADLYHVMIYMFLDPSGNLG
ENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILKKLHKE(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	39173601-39178040(+)
Potential amino acid sequence	MVKQRQIFREVSGRLADLEATLDAGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDV TKKCLVGEGWCPIFAKSQIKDVLQRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIV DAYGIARYEEANPAVYSVITFPFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGSFMEMA FGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVD PSWRGSRSELPFLNSLKMKMSILMGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALLILIKWC TGSQADLYHVMIYMFLDPSGNLGENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILKKLHKEV EKTVFVVFFSGDQAKAKILKICGSFGASCYPVPEEMVKQRQIFREVSGRLADLEATLDAGIQHR NKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIKDVLQRATLH SNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIVDAYGIARYEEANPAVYSVITFPFLFAVMF GDWGHGICLLLGACVLILREKKLSSQKLGSFMEMAFGGRYVILLMALFSIYCGLIYNEFFSVPF HIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILMGVTQM NLGIVLSYFDAKFHGNALDISLFGYLALLILIKWCTGSQADLYHVMIYMFLDPSGNLGENQLFW GQKELQILLLLMAIVAVPWMLFPKPFILKKLHKEVEKTVFVVFFSGDQAKAKILKICGSFGASC YPVPEEMVKQRQIFREVSGRLADLEATLDAGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLN MLNFDVTKKCLVGEGWCPIFAKSQIKDVLQRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTN AFQEIVDAYGIARYEEANPAVYSVITFPFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLG SFMEMAFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDP YPFGVDPSWRGSRSELPFLNSLKMKMSILMGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALL ILIKWCTGSQADLYHVMIYMFLDPSGNLGENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILK KLHKEVEKTVFVVFFSGDQAKAKILKICGSFGASCYPVPEEMVKQRQIFREVSGRLADLEATLD AGIQHRNKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIKDVL QRATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIVDAYGIARYEEANPAVYSVITFPF LFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGSFMEMAFGGRYVILLMALFSIYCGLIYNE FFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVDPSWRGSRSELPFLNSLKMKMSIL MGVTQMNLGIVLSYFDAKFHGNALDISLFGYLALLILIKWCTGSQADLYHVMIYMFLDPSGNLG ENQLFWGQKELQILLLLMAIVAVPWMLFPKPFILKKLHKE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA004748_circ_g.5

Address

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