Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA009895_circ_ig.3 |
ID in PlantcircBase | osi_circ_013546 |
Alias | Chr03:32064544_32064850(ZS97RS2), Chr03:32313141_32313448(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr3: 33638071-33638377 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ig-circRNA |
Identification method | find_circ, CIRI2, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA009895_circ_ig.1 BGIOSGA009895_circ_ig.2 BGIOSGA009895_circ_ig.4 BGIOSGA009895_circ_ig.5 BGIOSGA009895_circ_ig.6 BGIOSGA009895_circ_ig.7 BGIOSGA009895_circ_ig.8 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | CT-CA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs |
osa_circ_021409 osa_circ_021408 osa_circ_021410 osa_circ_021411 osa_circ_021412 osa_circ_021423 osa_circ_021430 osa_circ_021429 osa_circ_031519 osa_circ_021437 osa_circ_021436 osa_circ_007347 osa_circ_007346 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |