Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA009895_circ_ig.5 |
ID in PlantcircBase | osi_circ_013548 |
Alias | Chr03:32064595_32064736(ZS97RS2), Chr03:32313192_32313334(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr3: 33638122-33638263 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ig-circRNA |
Identification method | find_circ, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA009895_circ_ig.1 BGIOSGA009895_circ_ig.2 BGIOSGA009895_circ_ig.3 BGIOSGA009895_circ_ig.4 BGIOSGA009895_circ_ig.6 BGIOSGA009895_circ_ig.7 BGIOSGA009895_circ_ig.8 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | GT-AA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs |
osa_circ_021483 osa_circ_021466 osa_circ_021462 osa_circ_021471 osa_circ_021451 osa_circ_021472 osa_circ_021447 osa_circ_021452 osa_circ_021473 osa_circ_021508 osa_circ_021497 osa_circ_021459 osa_circ_021491 osa_circ_021454 osa_circ_021492 osa_circ_021510 osa_circ_021496 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |