Plant Circular RNA Database

Detail information of Zm00001d044099_circ_g.6

			
						 General Information
					
						CircRNA Name
						Zm00001d044099_circ_g.6
					
						ID in PlantcircBase
						zma_circ_007865
					
						Alias
						Zm03circ00116, zma_circ_0001320
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 219075898-219078392  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d044099						
					
						Parent gene annotation
						
							 carbonic anhydrase1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d044095_circ_ag.1 Zm00001d044095_circ_ag.2 Zm00001d044095_circ_ag.3 Zm00001d044095_circ_ag.4 Zm00001d044096_circ_g.1 Zm00001d044096_circ_ag.1 Zm00001d044096_circ_ag.2 Zm00001d044096_circ_ag.3 Zm00001d044096_circ_ag.4 Zm00001d044099_circ_g.1 Zm00001d044099_circ_g.2 Zm00001d044099_circ_g.3 Zm00001d044099_circ_g.4 Zm00001d044099_circ_g.5 Zm00001d044099_circ_g.7 Zm00001d044099_circ_g.8 Zm00001d044099_circ_g.9 Zm00001d044099_circ_g.10 Zm00001d044099_circ_g.11 Zm00001d044099_circ_g.12 Zm00001d044099_circ_g.13 Zm00001d044099_circ_g.14 Zm00001d044099_circ_g.15 Zm00001d044099_circ_g.16 Zm00001d044099_circ_g.17 Zm00001d044099_circ_g.18 Zm00001d044099_circ_g.19 Zm00001d044099_circ_g.20 Zm00001d044099_circ_g.21 Zm00001d044099_circ_g.22 Zm00001d044099_circ_g.23 Zm00001d044099_circ_g.24 Zm00001d044099_circ_g.25 Zm00001d044099_circ_g.26 Zm00001d044099_circ_g.27 Zm00001d044099_circ_g.28 Zm00001d044099_circ_g.29 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d044099_T002:6
Zm00001d044099_T001:2
Zm00001d044099_T004:6
Zm00001d044099_T003:2

General Information
CircRNA Name	Zm00001d044099_circ_g.6
ID in PlantcircBase	zma_circ_007865
Alias	Zm03circ00116, zma_circ_0001320
Organism	Zea mays
Position	chr3: 219075898-219078392 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d044099
Parent gene annotation	carbonic anhydrase1
Parent gene strand	-
Alternative splicing	Zm00001d044095_circ_ag.1 Zm00001d044095_circ_ag.2 Zm00001d044095_circ_ag.3 Zm00001d044095_circ_ag.4 Zm00001d044096_circ_g.1 Zm00001d044096_circ_ag.1 Zm00001d044096_circ_ag.2 Zm00001d044096_circ_ag.3 Zm00001d044096_circ_ag.4 Zm00001d044099_circ_g.1 Zm00001d044099_circ_g.2 Zm00001d044099_circ_g.3 Zm00001d044099_circ_g.4 Zm00001d044099_circ_g.5 Zm00001d044099_circ_g.7 Zm00001d044099_circ_g.8 Zm00001d044099_circ_g.9 Zm00001d044099_circ_g.10 Zm00001d044099_circ_g.11 Zm00001d044099_circ_g.12 Zm00001d044099_circ_g.13 Zm00001d044099_circ_g.14 Zm00001d044099_circ_g.15 Zm00001d044099_circ_g.16 Zm00001d044099_circ_g.17 Zm00001d044099_circ_g.18 Zm00001d044099_circ_g.19 Zm00001d044099_circ_g.20 Zm00001d044099_circ_g.21 Zm00001d044099_circ_g.22 Zm00001d044099_circ_g.23 Zm00001d044099_circ_g.24 Zm00001d044099_circ_g.25 Zm00001d044099_circ_g.26 Zm00001d044099_circ_g.27 Zm00001d044099_circ_g.28 Zm00001d044099_circ_g.29
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d044099_T002:6 Zm00001d044099_T001:2 Zm00001d044099_T004:6 Zm00001d044099_T003:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTCGTAGTGGGCGCCAACCAGCTTGAGCGTCCCGCCGGCCAGCCCTTCCTTGACGAAGGGGTA
GCTCTTGAGGTTCTGGAGCGACACGTTCACGGCCTCcttctcgagaatggagcactggtcatcg
aacggcaccgaggcgtgctctttctttaccttcatcttggcaatgaagccgatcttaacccagt
cctcgacg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 606
Transcript exons: 219075898-219076003,219076138-219076277,219076372-219076
488,219077114-219077162,219077337-219077398,219078261-21
9078392
CTTCTCGAGAATGGAGCACTGGTCATCGAACGGCACCGAGGCGTGCTCTTTCTTTACCTTCATC
TTGGCAATGAAGCCGATCTTAACCCAGTCCTCGACGAAGTGGAAGGTGTCAGGTGCGCCGTCCT
GGAGGGAGAGGAGCGCCCTGATGCCACCGCAGCAGCTATGGCCAATGACCACGAGGACCTCCAC
CTTGAGAGCGCACACAGCGTACTCGATGGCGGACCCGATGCCGGTGTACTTGGTCTTGTCGTAG
CCTGGGACCATGGCGGCTATGTTGCGAACGGTGAAGGCCTCGCCGGGCTGCAGGCCCAGGGTCA
CCGATGGGCACACACGGGAGTCGGAGCAAGCGAACACCATGTACTTGGGGGCCTGGCCGGACTT
GAGAGGCCCGAAAAGCTCCGGCTTCTTGTCATAGACATTGACCTTGAACTGCTGGAACCCGCTC
GTCAAGCGCTCGATGGCGTCCTGGGGAGGCTCCCATGTGACGAACTGCCCTTTGACGAAGTCGT
AGTGGGCGCCAACCAGCTTGAGCGTCCCGCCGGCCAGCCCTTCCTTGACGAAGGGGTAGCTCTT
GAGGTTCTGGAGCGACACGTTCACGGCCTC
						
					

						Genomic sequence
						
							CTTCTCGAGAATGGAGCACTGGTCATCGAACGGCACCGAGGCGTGCTCTTTCTTTACCTTCATC
TTGGCAATGAAGCCGATCTTAACCCAGTCCTCGACGAAGTGGCTGCGTACGTACACCACACCAA
ACCAACACACAACATGGTATAGAGAGGATCAAAATCATGCATGACATAAATAAGCGCAAATAGT
TTTTTATATCTAAATGAAACTTGTATATATTTTACTGTCGCGACTTACAAGGTGTCAGGTGCGC
CGTCCTGGAGGGAGAGGAGCGCCCTGATGCCACCGCAGCAGCTATGGCCAATGACCACGAGGAC
CTCCACCTTGAGAGCGCACACAGCGTACTCGATGGCGGACCCGATGCCGGTGTACTTGGTCTGC
AGTCGACACGAAAACGAGAGGCCGCGGCCGGCCGTGTGAGTAGAAATTGAGACCATTGCGTTGT
TCACAATCGTCAGTGTGTATATATACCTTGTCGTAGCCTGGGACCATGGCGGCTATGTTGCGAA
CGGTGAAGGCCTCGCCGGGCTGCAGGCCCAGGGTCACCGATGGGCACACACGGGAGTCGGAGCA
AGCGAACACCATGTACTGCATGCAGCATAGCAAAATCACTGTCATGTCAGGTCAGGCAAAAAGA
AGGAGCACAAAAAATCAGGCCGGTTCCCGCGGTTGTTAGCTATGCAGCGACAATGCCATCCCCA
CAGGTCATCCAATTAGTATATATATATATCATGGCTGAGCTCCTTGATCTATATGGCGCCGATA
CGTGTTATGTCGGTAGCGTAGACTACGCCGATATACTAGGTCTAATGTCGACTTTCACAAGGAT
ACATATAATTTTTTTTTTCAAAAGAAGTTTTAAAATATGGTAATTTTTATGGATAACAAAACTA
GTAGAACCCGCTAAAAGCATGAACGCATGCATGAAATAATCATGCGCATGGGATAGATGCCAAC
TCAGAACACCCATAAAGAAAAACAATAAACTCTGTACTTGGTTACTTGCAATATTCTGGCACGC
CAGGTTCTATATACTAGGAAGTGAGCCTATATAGGGACGGCGGCATCTCAATAATTTACCAAGC
AAATGCAAGTCTCGCCAGCTTAGCATATATGGCAGCACATGGGTTAGCAATTAGCACGCGCGCG
GGGCGCATGCATTTGGTTCAGAAGAATAAGAATGGAGTATAGGCTAGTAGGCAATAGCGCATAC
CTTGGGGGCCTGGCCGGACTTGAGAGGCCCGAAAAGCTCCGGCTTCTTGCTGTGAAATGAAGAA
AAAAAAATCAAACGTACTAGCACAGGAATAATATAGGATCAGTCGAAGCTATATCAGAATTCCC
GATACAAATGAAACGTTTGAAACTGAAACGGCTAAACCAAACGCCGGTGCTGCAGAAAACAACA
GCCAGCTCTGAGTAGTAGAGGGGTGACTTACTCATAGACATTGACCTTGAACTGCTGGAACCCG
CTCGTCAAGCGCTCGATGGCGTCCTGGGGCTGCAGGACCAGCAACAAGAAAATCGTCGGTCAGT
TCGCCATGCCCGGAAAGACTAACTTGCATGCTCGTGATGGTACGGTGATAGATGCAGCATGAGG
GGGGTATAGAGAGAGCGAGAGAATGAAGGGGGCGTGATGCAACTTTTGGCCACACTGGACCGGG
TGGGTGGGCTTCTGGTTCTCAAGGAGTGACGAGGTGCGTGGGAATCTATGGGAGGGCAAAGGCG
CTGCTCTGCTCTTTTCTTCGTCTCCTGATATCCTCCCATGCATGTCAACAAGCTAAGGGGAGAG
AAAGAAATTGCGATGGCAAACAAGGGAGATAAATTAAAGGGGGCTGGCCGGATGATGTTGGGAA
TTGGGATCTGGAGTGCGCTAGCTATGTGCAAATGCAAGACGACGGACGTGATGTCGTCAATATA
GCAATTGAAAAAAAAAGGTAAGAGCAACTCCAAGAGCTTATGTAAAACAAATTGACTAGCTAAA
AATAATAAAATTGGAGTAAAAATTGGATCCAACAGTCTCTTCAAATCCTTCTCTCGCTATCCAA
CTCGGTAAACAACCCCCTCCGCTAGCCAAATATGACTAATTCCCTACGCTAGCTATCCGGTCCT
CCCATAGCCTTTGTCCTCAGCCGGAGTGGAGGCAGGACGGTGTAGCATAGGCGCGTGGGACATA
GGGAAGAAGGCAAGGTGAGAATGACATGTGGGACCTACCAGTCTAATTTGGCTAGTCTGTTGGA
ATTAATCGTAATTTAGAGAGTGAATTATAGCTAAACGGCTAGCTAAATGAGAATATAGAATAAA
AAATTTGGCTAATCTATTGGAGTTGCTCTAAAAGAAGAGCTGTGCGCGTGGACCCCTACAGGCT
CCCATGTGACGAACTGCCCTTTGACGAAGTCGTAGTGGGCGCCAACCAGCTTGAGCGTCCCGCC
GGCCAGCCCTTCCTTGACGAAGGGGTAGCTCTTGAGGTTCTGGAGCGACACGTTCACGGCCTC
						
					

			
		

Sequences
Splice junction sequence	AGTCGTAGTGGGCGCCAACCAGCTTGAGCGTCCCGCCGGCCAGCCCTTCCTTGACGAAGGGGTA GCTCTTGAGGTTCTGGAGCGACACGTTCACGGCCTCcttctcgagaatggagcactggtcatcg aacggcaccgaggcgtgctctttctttaccttcatcttggcaatgaagccgatcttaacccagt cctcgacg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 606 Transcript exons: 219075898-219076003,219076138-219076277,219076372-219076 488,219077114-219077162,219077337-219077398,219078261-21 9078392 CTTCTCGAGAATGGAGCACTGGTCATCGAACGGCACCGAGGCGTGCTCTTTCTTTACCTTCATC TTGGCAATGAAGCCGATCTTAACCCAGTCCTCGACGAAGTGGAAGGTGTCAGGTGCGCCGTCCT GGAGGGAGAGGAGCGCCCTGATGCCACCGCAGCAGCTATGGCCAATGACCACGAGGACCTCCAC CTTGAGAGCGCACACAGCGTACTCGATGGCGGACCCGATGCCGGTGTACTTGGTCTTGTCGTAG CCTGGGACCATGGCGGCTATGTTGCGAACGGTGAAGGCCTCGCCGGGCTGCAGGCCCAGGGTCA CCGATGGGCACACACGGGAGTCGGAGCAAGCGAACACCATGTACTTGGGGGCCTGGCCGGACTT GAGAGGCCCGAAAAGCTCCGGCTTCTTGTCATAGACATTGACCTTGAACTGCTGGAACCCGCTC GTCAAGCGCTCGATGGCGTCCTGGGGAGGCTCCCATGTGACGAACTGCCCTTTGACGAAGTCGT AGTGGGCGCCAACCAGCTTGAGCGTCCCGCCGGCCAGCCCTTCCTTGACGAAGGGGTAGCTCTT GAGGTTCTGGAGCGACACGTTCACGGCCTC
Genomic sequence	CTTCTCGAGAATGGAGCACTGGTCATCGAACGGCACCGAGGCGTGCTCTTTCTTTACCTTCATC TTGGCAATGAAGCCGATCTTAACCCAGTCCTCGACGAAGTGGCTGCGTACGTACACCACACCAA ACCAACACACAACATGGTATAGAGAGGATCAAAATCATGCATGACATAAATAAGCGCAAATAGT TTTTTATATCTAAATGAAACTTGTATATATTTTACTGTCGCGACTTACAAGGTGTCAGGTGCGC CGTCCTGGAGGGAGAGGAGCGCCCTGATGCCACCGCAGCAGCTATGGCCAATGACCACGAGGAC CTCCACCTTGAGAGCGCACACAGCGTACTCGATGGCGGACCCGATGCCGGTGTACTTGGTCTGC AGTCGACACGAAAACGAGAGGCCGCGGCCGGCCGTGTGAGTAGAAATTGAGACCATTGCGTTGT TCACAATCGTCAGTGTGTATATATACCTTGTCGTAGCCTGGGACCATGGCGGCTATGTTGCGAA CGGTGAAGGCCTCGCCGGGCTGCAGGCCCAGGGTCACCGATGGGCACACACGGGAGTCGGAGCA AGCGAACACCATGTACTGCATGCAGCATAGCAAAATCACTGTCATGTCAGGTCAGGCAAAAAGA AGGAGCACAAAAAATCAGGCCGGTTCCCGCGGTTGTTAGCTATGCAGCGACAATGCCATCCCCA CAGGTCATCCAATTAGTATATATATATATCATGGCTGAGCTCCTTGATCTATATGGCGCCGATA CGTGTTATGTCGGTAGCGTAGACTACGCCGATATACTAGGTCTAATGTCGACTTTCACAAGGAT ACATATAATTTTTTTTTTCAAAAGAAGTTTTAAAATATGGTAATTTTTATGGATAACAAAACTA GTAGAACCCGCTAAAAGCATGAACGCATGCATGAAATAATCATGCGCATGGGATAGATGCCAAC TCAGAACACCCATAAAGAAAAACAATAAACTCTGTACTTGGTTACTTGCAATATTCTGGCACGC CAGGTTCTATATACTAGGAAGTGAGCCTATATAGGGACGGCGGCATCTCAATAATTTACCAAGC AAATGCAAGTCTCGCCAGCTTAGCATATATGGCAGCACATGGGTTAGCAATTAGCACGCGCGCG GGGCGCATGCATTTGGTTCAGAAGAATAAGAATGGAGTATAGGCTAGTAGGCAATAGCGCATAC CTTGGGGGCCTGGCCGGACTTGAGAGGCCCGAAAAGCTCCGGCTTCTTGCTGTGAAATGAAGAA AAAAAAATCAAACGTACTAGCACAGGAATAATATAGGATCAGTCGAAGCTATATCAGAATTCCC GATACAAATGAAACGTTTGAAACTGAAACGGCTAAACCAAACGCCGGTGCTGCAGAAAACAACA GCCAGCTCTGAGTAGTAGAGGGGTGACTTACTCATAGACATTGACCTTGAACTGCTGGAACCCG CTCGTCAAGCGCTCGATGGCGTCCTGGGGCTGCAGGACCAGCAACAAGAAAATCGTCGGTCAGT TCGCCATGCCCGGAAAGACTAACTTGCATGCTCGTGATGGTACGGTGATAGATGCAGCATGAGG GGGGTATAGAGAGAGCGAGAGAATGAAGGGGGCGTGATGCAACTTTTGGCCACACTGGACCGGG TGGGTGGGCTTCTGGTTCTCAAGGAGTGACGAGGTGCGTGGGAATCTATGGGAGGGCAAAGGCG CTGCTCTGCTCTTTTCTTCGTCTCCTGATATCCTCCCATGCATGTCAACAAGCTAAGGGGAGAG AAAGAAATTGCGATGGCAAACAAGGGAGATAAATTAAAGGGGGCTGGCCGGATGATGTTGGGAA TTGGGATCTGGAGTGCGCTAGCTATGTGCAAATGCAAGACGACGGACGTGATGTCGTCAATATA GCAATTGAAAAAAAAAGGTAAGAGCAACTCCAAGAGCTTATGTAAAACAAATTGACTAGCTAAA AATAATAAAATTGGAGTAAAAATTGGATCCAACAGTCTCTTCAAATCCTTCTCTCGCTATCCAA CTCGGTAAACAACCCCCTCCGCTAGCCAAATATGACTAATTCCCTACGCTAGCTATCCGGTCCT CCCATAGCCTTTGTCCTCAGCCGGAGTGGAGGCAGGACGGTGTAGCATAGGCGCGTGGGACATA GGGAAGAAGGCAAGGTGAGAATGACATGTGGGACCTACCAGTCTAATTTGGCTAGTCTGTTGGA ATTAATCGTAATTTAGAGAGTGAATTATAGCTAAACGGCTAGCTAAATGAGAATATAGAATAAA AAATTTGGCTAATCTATTGGAGTTGCTCTAAAAGAAGAGCTGTGCGCGTGGACCCCTACAGGCT CCCATGTGACGAACTGCCCTTTGACGAAGTCGTAGTGGGCGCCAACCAGCTTGAGCGTCCCGCC GGCCAGCCCTTCCTTGACGAAGGGGTAGCTCTTGAGGTTCTGGAGCGACACGTTCACGGCCTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.458448332

Conservation Information
Conserved circRNAs	NA
PMCS	0.458448332

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							219076198-219078389(+)
219076487-219075900(-)
						
					

						Potential amino acid sequence
						
							MANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGLAGLQAQGHRWAHTGVGASEH
HVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCDELPFDEVVVGANQLERPAGQ
PFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNEADLNPVLDEVEGVRCAVLEG
EERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGLAGLQAQGHRW
AHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCDELPFDEVVVG
ANQLERPAGQPFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNEADLNPVLDEV
EGVRCAVLEGEERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGL
AGLQAQGHRWAHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCD
ELPFDEVVVGANQLERPAGQPFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNE
ADLNPVLDEVEGVRCAVLEGEERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDH
GGYVANGEGLAGLQAQGHRWAHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQAL
DGVLGRLPCDELPFDEVVVGANQLERPAGQPFLDEGVALEVLERHVHGL(+)
MVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGIGSAIEYAVCALKVEVLVVIG
HSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHASVPFDDQCSILEKEAVNVSLQ
NLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERLTSGFQQFKVNVYDKKPELFG
PLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGIGSAIEYAVCA
LKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHASVPFDDQCSIL
EKEAVNVSLQNLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERLTSGFQQFKVN
VYDKKPELFGPLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGI
GSAIEYAVCALKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHAS
VPFDDQCSILEKEAVNVSLQNLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERL
TSGFQQFKVNVYDKKPELFGPLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVP
GYDKTKYTGIGSAIEYAVCALKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIA
KMKVKKEHASVPFDDQCSILEK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	219076198-219078389(+) 219076487-219075900(-)
Potential amino acid sequence	MANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGLAGLQAQGHRWAHTGVGASEH HVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCDELPFDEVVVGANQLERPAGQ PFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNEADLNPVLDEVEGVRCAVLEG EERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGLAGLQAQGHRW AHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCDELPFDEVVVG ANQLERPAGQPFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNEADLNPVLDEV EGVRCAVLEGEERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDHGGYVANGEGL AGLQAQGHRWAHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQALDGVLGRLPCD ELPFDEVVVGANQLERPAGQPFLDEGVALEVLERHVHGLLLENGALVIERHRGVLFLYLHLGNE ADLNPVLDEVEGVRCAVLEGEERPDATAAAMANDHEDLHLESAHSVLDGGPDAGVLGLVVAWDH GGYVANGEGLAGLQAQGHRWAHTGVGASEHHVLGGLAGLERPEKLRLLVIDIDLELLEPARQAL DGVLGRLPCDELPFDEVVVGANQLERPAGQPFLDEGVALEVLERHVHGL(+) MVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGIGSAIEYAVCALKVEVLVVIG HSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHASVPFDDQCSILEKEAVNVSLQ NLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERLTSGFQQFKVNVYDKKPELFG PLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGIGSAIEYAVCA LKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHASVPFDDQCSIL EKEAVNVSLQNLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERLTSGFQQFKVN VYDKKPELFGPLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVPGYDKTKYTGI GSAIEYAVCALKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIAKMKVKKEHAS VPFDDQCSILEKEAVNVSLQNLKSYPFVKEGLAGGTLKLVGAHYDFVKGQFVTWEPPQDAIERL TSGFQQFKVNVYDKKPELFGPLKSGQAPKYMVFACSDSRVCPSVTLGLQPGEAFTVRNIAAMVP GYDKTKYTGIGSAIEYAVCALKVEVLVVIGHSCCGGIRALLSLQDGAPDTFHFVEDWVKIGFIA KMKVKKEHASVPFDDQCSILEK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d044099_circ_g.6

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