Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | POPTR_0010s18980_circ_ag.5 |
| ID in PlantcircBase | pop_circ_002829 |
| Alias | Chr10:18026317|18031142 |
| Organism | Populus trichocarpa |
| Position | chr10: 17047825-17052644 JBrowse» |
| Reference genome | Populus trichocarpa genome v3.0 |
| Type | ag-circRNA |
| Identification method | find_circ |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | POPTR_0010s18980_circ_igg.1 POPTR_0010s18980_circ_igg.2 POPTR_0010s18980_circ_ag.1 POPTR_0010s18980_circ_ag.2 POPTR_0010s18980_circ_ag.3 POPTR_0010s18980_circ_ag.4 POPTR_0010s18980_circ_ag.6 |
| Support reads | NA |
| Tissues | stem cambium |
| Exon boundary | NA-NA |
| Splicing signals | AG-AA |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.426832573 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zheng et al., 2020 |