Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038163_circ_g.1 |
ID in PlantcircBase | zma_circ_000353 |
Alias | NA |
Organism | Zea mays |
Position | chr6: 150024492-150024603 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Zm00001d038163 |
Parent gene annotation |
pyruvate orthophosphate dikinase1 |
Parent gene strand | + |
Alternative splicing | Zm00001d038161_circ_ag.1 Zm00001d038161_circ_g.1 Zm00001d038163_circ_g.2 Zm00001d038163_circ_g.3 Zm00001d038163_circ_g.4 Zm00001d038163_circ_g.5 |
Support reads | 10 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | CC-CA |
Number of exons covered | Zm00001d038163_T002:1 Zm00001d038163_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.565844473 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |