Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038163_circ_g.4 |
ID in PlantcircBase | zma_circ_002369 |
Alias | circ1105 |
Organism | Zea mays |
Position | chr6: 150029734-150029791 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d038163 |
Parent gene annotation |
pyruvate orthophosphate dikinase1 |
Parent gene strand | + |
Alternative splicing | Zm00001d038161_circ_ag.1 Zm00001d038161_circ_g.1 Zm00001d038163_circ_g.1 Zm00001d038163_circ_g.2 Zm00001d038163_circ_g.3 Zm00001d038163_circ_g.5 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d038163_T009:1 Zm00001d038163_T003:1 Zm00001d038163_T016:1 Zm00001d038163_T001:1 Zm00001d038163_T027:1 Zm00001d038163_T007:1 Zm00001d038163_T026:1 Zm00001d038163_T018:1 Zm00001d038163_T004:1 Zm00001d038163_T002:1 Zm00001d038163_T024:1 Zm00001d038163_T020:1 Zm00001d038163_T022:1 Zm00001d038163_T015:1 Zm00001d038163_T021:1 Zm00001d038163_T006:1 Zm00001d038163_T017:1 Zm00001d038163_T013:1 Zm00001d038163_T012:1 Zm00001d038163_T010:1 Zm00001d038163_T025:1 Zm00001d038163_T019:1 Zm00001d038163_T023:1 Zm00001d038163_T008:1 Zm00001d038163_T005:1 Zm00001d038163_T014:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.396550862 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |