Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038161_circ_g.1 |
ID in PlantcircBase | zma_circ_005270 |
Alias | control_test_circ_004220 |
Organism | Zea mays |
Position | chr6: 149981437-149981504 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d038161 |
Parent gene annotation |
resistance to phytophthora 1 |
Parent gene strand | + |
Alternative splicing | Zm00001d038161_circ_ag.1 Zm00001d038163_circ_g.1 Zm00001d038163_circ_g.2 Zm00001d038163_circ_g.3 Zm00001d038163_circ_g.4 Zm00001d038163_circ_g.5 |
Support reads | NA |
Tissues | seedling |
Exon boundary | Yes-No |
Splicing signals | TA-AG |
Number of exons covered | Zm00001d038161_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.186273529 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |