Splice junction sequence |
TTGTTCCATAGCTCACAGCATCATCTAGTTTTCCTTTGTCAAGAGCAAGTTTTGATGACTCCAA GAGTGTCCTTCCGTCAGATGAAATACACAGCACATGtttagtgccaattcaaaatgttgaagac gatagtaaaatacagaaagatccccatagcttttcatagtgtcgggatggtcgagaccaagttc tctctcat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 334 Transcript exons: 5260077-5260213,5260361-5260457,5260551-5260650 TTTAGTGCCAATTCAAAATGTTGAAGACGATAGTAAAATACAGAAAGATCCCCATAGCTTTTCA TAGTGTCGGGATGGTCGAGACCAAGTTCTCTCTCATTTATATCTAGAGCCTTCTGCTGATATAT TGTTGCCTGGTTAAAATCGCCAGTGTGGTATAGTACAACTGCGAGAAGACTGTACGCACATGCA GTATTTCTATGATAAGGCCCACAGACAGCAATCATCTTGACTTTGTTCCATAGCTCACAGCATC ATCTAGTTTTCCTTTGTCAAGAGCAAGTTTTGATGACTCCAAGAGTGTCCTTCCGTCAGATGAA ATACACAGCACATG
Transcript length: 341 Transcript exons: 5260077-5260213,5260361-5260464,5260551-5260650 TTTAGTGCCAATTCAAAATGTTGAAGACGATAGTAAAATACAGAAAGATCCCCATAGCTTTTCA TAGTGTCGGGATGGTCGAGACCAAGTTCTCTCTCATTTATATCTAGAGCCTTCTGCTGATATAT TGTTGCCTGGTTAAAATCGCCAGTGTGGTATAGTACAACTGCGAGAAGACTGTACGCACATGCA GTATTTCTATGATAAGGCCCACAGACAGCAATCATCTTGACTAATGCCTTTGTTCCATAGCTCA CAGCATCATCTAGTTTTCCTTTGTCAAGAGCAAGTTTTGATGACTCCAAGAGTGTCCTTCCGTC AGATGAAATACACAGCACATG
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Genomic sequence |
TTTAGTGCCAATTCAAAATGTTGAAGACGATAGTAAAATACAGAAAGATCCCCATAGCTTTTCA TAGTGTCGGGATGGTCGAGACCAAGTTCTCTCTCATTTATATCTAGAGCCTTCTGCTGATATAT TGTTGCCTGATCAAGAGAGGATAAAAAATCAGAGATGACGGTACCTCTCATCAATTTATTTATA TACAGTGCCTAGAACGAGAACATCAAACTCTCTATTTGTTACTTGAAATCAAAGTTTCCATTTG GGAAGAAGATAAAAGATGATGATACCTGGTTAAAATCGCCAGTGTGGTATAGTACAACTGCGAG AAGACTGTACGCACATGCAGTATTTCTATGATAAGGCCCACAGACAGCAATCATCTTGACTAAT GCCTAGGAAATGCAAGAAGTCAGCATCTCTTAGATAACAATTCAGTTGGTTAGAATGATGATCA TGTAGCTATCAAAAGAAATGACACCTTTGTTCCATAGCTCACAGCATCATCTAGTTTTCCTTTG TCAAGAGCAAGTTTTGATGACTCCAAGAGTGTCCTTCCGTCAGATGAAATACACAGCACATG |