Splice junction sequence |
CAGATGCAATAACCGCCCTAAGAAGATGCTTGAAAGCTCTTGTAATCATCTCATGAATACAGAG GGACTGTATATGAGGAAGTTTCTCAGCAAGTTTAGCtttagtgccaattcaaaatgttgaagac gatagtaaaatacagaaagatccccatagcttttcatagtgtcgggatggtcgagaccaagttc tctctcat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 752 Transcript exons: 5260077-5260210,5260358-5260462,5260549-5260650,5260786- 5260878,5260949-5261266 TTTAGTGCCAATTCAAAATGTTGAAGACGATAGTAAAATACAGAAAGATCCCCATAGCTTTTCA TAGTGTCGGGATGGTCGAGACCAAGTTCTCTCTCATTTATATCTAGAGCCTTCTGCTGATATAT TGTTGCCTGGTTAAAATCGCCAGTGTGGTATAGTACAACTGCGAGAAGACTGTACGCACATGCA GTATTTCTATGATAAGGCCCACAGACAGCAATCATCTTGACTAATGCCTTTGTTCCATAGCTCA CAGCATCATCTAGTTTTCCTTTGTCAAGAGCAAGTTTTGATGACTCCAAGAGTGTCCTTCCGTC AGATGAAATACACAGCACATGCTTGCACACAGGTACCAATCCAATAATGTCAGAGCTCATGAAA GGATTTGGAGAATCGAAGTCAAAATCTCTTGAAACTAGTTCTAAACCAACCTTCTGGCAGAGTC CTCGGAGGATAGAAAACTTTTTTAAATGATGGAACTCATCTTTCTGTATCCAACCAAATTTTCT GGAGAGAAATTTCTGTAGCCACTGTAATCTGAGACAGTACTCTTCACCGGGGATTCTATCGCAC CCTTCCAATTCACGGCGGCCAAGCATAAAATTTAATGAAGCAGCTACCGCCACAGGTAGCTCTG CCATATTATTAACAGATGCAATAACCGCCCTAAGAAGATGCTTGAAAGCTCTTGTAATCATCTC ATGAATACAGAGGGACTGTATATGAGGAAGTTTCTCAGCAAGTTTAGC
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Genomic sequence |
TTTAGTGCCAATTCAAAATGTTGAAGACGATAGTAAAATACAGAAAGATCCCCATAGCTTTTCA TAGTGTCGGGATGGTCGAGACCAAGTTCTCTCTCATTTATATCTAGAGCCTTCTGCTGATATAT TGTTGCCTGATCAAGAGAGGATAAAAAATCAGAGATGACGGTACCTCTCATCAATTTATTTATA TACAGTGCCTAGAACGAGAACATCAAACTCTCTATTTGTTACTTGAAATCAAAGTTTCCATTTG GGAAGAAGATAAAAGATGATGATACCTGGTTAAAATCGCCAGTGTGGTATAGTACAACTGCGAG AAGACTGTACGCACATGCAGTATTTCTATGATAAGGCCCACAGACAGCAATCATCTTGACTAAT GCCTAGGAAATGCAAGAAGTCAGCATCTCTTAGATAACAATTCAGTTGGTTAGAATGATGATCA TGTAGCTATCAAAAGAAATGACACCTTTGTTCCATAGCTCACAGCATCATCTAGTTTTCCTTTG TCAAGAGCAAGTTTTGATGACTCCAAGAGTGTCCTTCCGTCAGATGAAATACACAGCACATGCT GTTCAAACGAACATATATCTTAAAGATTACTCTCTAGAATTTGAACCATAAAATCGAAGCAGCC GTAGATAAATAACAGATTGTGACCGAATCTCTATTAGTCAAACTAAAATTGGATCATGGAGAGG CGAACCTTGCACACAGGTACCAATCCAATAATGTCAGAGCTCATGAAAGGATTTGGAGAATCGA AGTCAAAATCTCTTGAAACTAGTTCTAAACCAACCTGTAAAAGCATGAAATCAATAGAGAACTC TAATTTTGATACAAGCAGCAGTAACACAGAGCTACTTTACCTTCTGGCAGAGTCCTCGGAGGAT AGAAAACTTTTTTAAATGATGGAACTCATCTTTCTGTATCCAACCAAATTTTCTGGAGAGAAAT TTCTGTAGCCACTGTAATCTGAGACAGTACTCTTCACCGGGGATTCTATCGCACCCTTCCAATT CACGGCGGCCAAGCATAAAATTTAATGAAGCAGCTACCGCCACAGGTAGCTCTGCCATATTATT AACAGATGCAATAACCGCCCTAAGAAGATGCTTGAAAGCTCTTGTAATCATCTCATGAATACAG AGGGACTGTATATGAGGAAGTTTCTCAGCAAGTTTAGC |