Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d048564_circ_g.2 |
ID in PlantcircBase | zma_circ_003083 |
Alias | circ1445 |
Organism | Zea mays |
Position | chr9: 158842187-158843314 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d048564 |
Parent gene annotation |
Putative glycogen synthase kinase family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d048564_circ_g.1 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d048564_T003:5 Zm00001d048564_T001:4 Zm00001d048564_T008:1 Zm00001d048564_T006:4 Zm00001d048564_T009:5 Zm00001d048564_T002:1 Zm00001d048564_T004:5 Zm00001d048564_T007:5 Zm00001d048564_T010:5 Zm00001d048564_T005:5 |
Conservation Information | |
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Conserved circRNAs | osi_circ_008612 osa_circ_007715 |
PMCS | 0.08446923 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |