Splice junction sequence |
GACAGCGATACGCCCGTGCATGTTCATGTTCATAAGCACTGCATCTAGCATTTTGCCTCCTACA TTCTCAAAGTATATGTCAATGCCATTAGGGAAACACctttttagggcagcagtaaggtcagatt cttccttgtagttaaatgcatcatcaaacccaaacttggtcttcagaagatcaacctaacggat cccccaaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 441 Transcript exons: 5576809-5576893,5576993-5577164,5577410-5577593 CTTTTTAGGGCAGCAGTAAGGTCAGATTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACT TGGTCTTCAGAAGATCAACCTACCTTCTCTTTACTTCCAGCGCTTCCAACAACATAACAGCCCA TCATCTTAGCAAGTTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGT CTCTCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACCAGGCATACCT ACATACCTAAAAGTCCAGTGTAATAAGATAATGGAACATCAGTATGTTGGATCTTGAAATGCGC GTGAGTCATTGGAGTGATAACACTGTACTCCTCCCATGCAACTATACCCCAGAGTAAATCTCCT TTCTTGTAATCTGGATGTCCAGATTCTATTATTCTAGACACTCCATACCCTTGGATT
Transcript length: 442 Transcript exons: 5576809-5576903,5576993-5577164,5577410-5577584 CTTTTTAGGGCAGCAGTAAGGTCAGATTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACT TGGTCTTCAGAAGATCAACCTAACGGATCCCACCTTCTCTTTACTTCCAGCGCTTCCAACAACA TAACAGCCCATCATCTTAGCAAGTTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACA CATAAACTGTCTCTCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACC AGGCATACCTACATACCTAAAAGTCCAGTGTAATAAGATAATGGAACATCAGTATGTTGGATCT TGAAATGCGCGTGAGTCATTGGAGTGATAACACTGTACTCCTCCCATGCAACTATACCCCAGAG TAAATCTCCTTTCTTGTAATCTGGATGTCCAGATTCTATTATTCTAGACACTCCATAC
Transcript length: 445 Transcript exons: 5576809-5576893,5576993-5577164,5577410-5577597 CTTTTTAGGGCAGCAGTAAGGTCAGATTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACT TGGTCTTCAGAAGATCAACCTACCTTCTCTTTACTTCCAGCGCTTCCAACAACATAACAGCCCA TCATCTTAGCAAGTTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGT CTCTCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACCAGGCATACCT ACATACCTAAAAGTCCAGTGTAATAAGATAATGGAACATCAGTATGTTGGATCTTGAAATGCGC GTGAGTCATTGGAGTGATAACACTGTACTCCTCCCATGCAACTATACCCCAGAGTAAATCTCCT TTCTTGTAATCTGGATGTCCAGATTCTATTATTCTAGACACTCCATACCCTTGGATTGGCT
Transcript length: 502 Transcript exons: 5576809-5576954,5576993-5577160,5577410-5577597 CTTTTTAGGGCAGCAGTAAGGTCAGATTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACT TGGTCTTCAGAAGATCAACCTAACGGATCCCCCAAAAGTAAAACGGCTAATTAATCATTCTTTT GAAGGAGAACAAAGAAACACCTTCTCTTTACTTCCAGCGCTTCCAACAACATAACAGCCCATCA TCTTAGCAAGTTGTCCCACAAGCTGACCAACAGCACCAGATGCAGCTGACACATAAACTGTCTC TCCTTCCTTTGGAGAACAAACTTCATAAAACCCAGCATAGGCAGTCATACCAGGCATACATACC TAAAAGTCCAGTGTAATAAGATAATGGAACATCAGTATGTTGGATCTTGAAATGCGCGTGAGTC ATTGGAGTGATAACACTGTACTCCTCCCATGCAACTATACCCCAGAGTAAATCTCCTTTCTTGT AATCTGGATGTCCAGATTCTATTATTCTAGACACTCCATACCCTTGGATTGGCT
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Genomic sequence |
CTTTTTAGGGCAGCAGTAAGGTCAGATTCTTCCTTGTAGTTAAATGCATCATCAAACCCAAACT TGGTCTTCAGAAGATCAACCTAACGGATCCCCCAAAAGTAAAACGGCTAATTAATCATTCTTTT GAAGGAGAACAAAGAAACATAAGGAAACAAAATATGGAAATGATTATCAATTCCTCACCTTCTC TTTACTTCCAGCGCTTCCAACAACATAACAGCCCATCATCTTAGCAAGTTGTCCCACAAGCTGA CCAACAGCACCAGATGCAGCTGACACATAAACTGTCTCTCCTTCCTTTGGAGAACAAACTTCAT AAAACCCAGCATAGGCAGTCATACCAGGCATACCTATTAGGACAAGACAAAAACCCATCAAAGA GTGAATATATGAAATAGATCAACAAACAAAACAGTTGAAACCCTAGACTGAAGTTATAACCAAT TCCATTCATATGTTTCTAAGATTTTTTAGAAATCCATAATAAAGGTTATGACCTCACTGTCTCA AGTCAAAACATTGTATCATCAAGAAGCAGATTTCCAAAATTTTACAAAGTGATTCCACCTTACA AAACTATGAAAAAGGTTGAGATTAACATACCTAAAAGTCCAGTGTAATAAGATAATGGAACATC AGTATGTTGGATCTTGAAATGCGCGTGAGTCATTGGAGTGATAACACTGTACTCCTCCCATGCA ACTATACCCCAGAGTAAATCTCCTTTCTTGTAATCTGGATGTCCAGATTCTATTATTCTAGACA CTCCATACCCTTGGATTGGCTACACCAAAACACACAACGGCAACAACAACAGTCAACACGATAG ACATAGCAAAAAAACAGAACCAAGAGAGACACAATTTCTTCTCAGTGTCTTCAAGAACACCAAA TTGTCATCAATAAGAAGCATCTAGTTTCTTCACATGCAAACCAAACAAAATAAACATTATCATC ATTACCTGGCCGGGAGTGTAAGCTTGAGCAAGAGCAGCAGTGGAAGGATCAGGTTTCCCCATGC GAATTCTCATGTAAGGATCGCATGACAAGTAGAGATTCTTCACTAGAACAGAGTTAGTACCTTC CGGAACCCTAAGTTCGACGGTGGTGGTAGTGAAATCGAAATCGGATTCCGTAGGGAAACCACTC ACGTAGTCTTTCAATATGACTTGCTTGTTCGTCGCCGTCATCGTTGATTCTCGTGACTTCACCA AATTTGTTACTGCTTCTTCTTCGGTTTCTCTCGATGACGCCGCTGCTTTTATAGAGTCATCTCC AGTGTGCCACGAATTCATGATATCAACTTATCAAGTATGACGTCACTGCTTATGTGTTCTGATT TTTCACATTTTGGATTCTTTCTCTTTCGAGCGTTTTTTTCTCTCTTTGACTTTCACATTCCTTT TGCATACCTTTTTTTTTCCTCTTACGTATCTCTCCTTTCACATTTTGCTTTTCGTCTTTTTACA CTAGAGAACTAATTCTAAACTCGTATTAAATTTCTCACTAATGATAGTAATTGGAAAAACTAGA GGTTTTTGACACCCTCAATACATTGTTAAGGTAAATGCAACTTTTTGCGGAGTCTTTTTGGAAA TAAGATAGAAAACAGAGTTCGAAGGCTAAAACAGAGCAATCTGGTGCTTAAGTTCTTCTTGTAT GGAACCAGACGCGGAGTACGTCTTCGAGTTTCGTCGAGCTATTTGGTATTAAACGTAACATTGT GGTTAATCCAGCTTCAATAGCTCTACTTTGAGTTACCAAAATTTAAACACGTTGTGGTCAATAT CCTCGTTTGTTGGTCACCTAATTGACAAATTTGGGTAGGTTTACTAATTTCCAAATGGCTAAAA TGTGATTGGTCCAGTCCACTTTGCCAATTGATGAAAGAAAAATTGAAATAGGTGGTAACGGTGA AAATAACTTTATAACATATCACACCAAACCCACAAAACAGTATCCCCATCTTCCGAATTAGTGT TCGCAACACTAACTGTTAAAACAGAGCACAAAACAGAGCCATGTCCTATAATAAAGAAGAAAAG GAGTTGCACAAATTGTATTCATTGATGCTTAAACACGCATACTTGGGAACAAGAGCTAGAAACA TGGGTTTGTATTAGGCTTCTTTTTTGGATTTGTGAGAGAGGTTTTGGCTTGTTTGTTACTACTT ACATACATTTTGTGAACCAAGTCACATAAAATGATAAAACCAATAACAAACAAATTAATCTTAC TGTATATACTATAATTACTATTATTCATAAACCAAAAACTCACGGTTGGGTTCAACAGCCATAC AAACTCTTGTTGGATAAATATAACATTTCTCCCAAATAAGTATTATTCCCTCACGAGCAATAAA ACCTTACTCCCAATTAAAGTATTCATCATTCACGAGCAATAACAACAACTTGTTTCCCAACATT CTTACCATGGAAGAGTCCCACGAGAGCTTCAGGACCTTTCTCGAGCCCATCAGCTACATCTTCC ACGTACGTTATCTTCCCTTCTTTAATGTGCGGATGCAGAAACTCCAAGAACTTTGAGTATTCGT CGTAGAAATCAGACACTACAAAGCCTTGAATGCGGATTCGTTTGTAGATTATGTTGGATAGGTT GTGTACACCTTCTTGGTTCTCAAGATTGTACTGTGAGATCATTCCACAGACAGCGATACGCCCG TGCATGTTCATGTTCATAAGCACTGCATCTAGCATTTTGCCTCCTACATTCTCAAAGTATATGT CAATGCCATTAGGGAAACAC |