Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | AT3G14720_circ_g.8 |
| ID in PlantcircBase | ath_circ_021808 |
| Alias | At_ciR662 |
| Organism | Arabidpsis thaliana |
| Position | chr3: 4947383-4947901 JBrowse» |
| Reference genome | TAIR10.38 |
| Type | e-circRNA |
| Identification method | CIRCexplorer, PcircRNA_finder, find_circ |
| Parent gene | AT3G14720 |
| Parent gene annotation |
Mitogen-activated protein kinase 19 |
| Parent gene strand | + |
| Alternative splicing | AT3G14720_circ_g.2 AT3G14720_circ_g.3 AT3G14720_circ_g.4 AT3G14720_circ_g.5 AT3G14720_circ_g.6 AT3G14720_circ_g.7 AT3G14720_circ_g.9 AT3G14720_circ_g.10 AT3G14720_circ_g.11 |
| Support reads | 17/3 |
| Tissues | leaf/whole_plant |
| Exon boundary | Yes-Yes |
| Splicing signals | GT-AG |
| Number of exons covered | AT3G14720.1:2 AT3G14720.3:2 AT3G14720.2:2 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.416647406 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ye et al., 2015;Chu et al., 2017 |