Plant Circular RNA Database

Detail information of Os11g0704550_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os11g0704550_circ_g.2
					
						ID in PlantcircBase
						osa_circ_010195
					
						Alias
						Os_ciR850
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 28829450-28833927  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os11g0704550						
					
						Parent gene annotation
						
							Conserved hypothetical protein. (Os11t0704550-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						33
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0704550-01:7

General Information
CircRNA Name	Os11g0704550_circ_g.2
ID in PlantcircBase	osa_circ_010195
Alias	Os_ciR850
Organism	Oryza sativa
Position	chr11: 28829450-28833927 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Os11g0704550
Parent gene annotation	Conserved hypothetical protein. (Os11t0704550-01)
Parent gene strand	+
Alternative splicing	NA
Support reads	33
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0704550-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATCGGAGTAGGCACAAAGCTAAATTTATTATGCCAATTCGTCTGTCGGTCAAAAATTTGAGGAC
ACCTGACCGTTACTTTGTTGATCAATATCTATACAGtactacgaggcaagaagcacagagatag
ttgaggcaggggaacctttgggagtgtgctgatatgccactaattgcttaacacaccgagaagc
ttctcggc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 116
Transcript exons: 28829450-28829498,28833861-28833927
TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGCAATTCGTCTGTCGG
TCAAAAATTTGAGGACACCTGACCGTTACTTTGTTGATCAATATCTATACAG
Transcript length: 856
Transcript exons: 28829450-28829577,28830230-28830308,28831706-28831797,28
832692-28832970,28833081-28833155,28833628-28833726,2883
3824-28833927
TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGGAGTGTGCTGATATG
CCACTAATTGCTTAACACACCGAGAAGCTTCTCGGCATTTGCCAAATTTGGCTTCCCAAGACAG
GTCATGGGCATCTATTTCCATAGGCATGGAAGTAAAAATGTTACTTGTGAAGACTTTTGTGCAC
ACATGTGTGGTGCAGGTTGAACTTTAGTCAGGAAAGGTCTTGGATTCCATCGCAGCTCATGAGC
ATGTTGAAGTGGCTGTTATTCCACCTGCAGGTCAATCACCAAGGTCCCTGCAGTTTTTGGTGGT
ATTGTTTTGCATAATCTGGTCACTAGATGCCTACCAACTGCTTGAGATAGTGCCTGGCAAGAAA
ATCACTGTTCTTTGGCTAAATCTTTACATGGCATCTCTGTTCTGCCATTCTCACCGACATCCAG
TTTTCTTGGAGCTTGGCATCCCCTCCTTGTGCAACTCGTTGCAAGAACAAGTCTCTGCTGGCGT
TCTCTGCAGTTCATCTATATTCTTTTGTTGATGCTCTCTACTTACATAATGCGCTTCTCTATCT
GTAGCTCAAATAAATTCGCTAGTGTATGTTGCTGTTGGATTGTTCTGCAGCTTTTGCTTCCATT
GCTATTAATTTGGTAGGTAAACCTTCATAGTTTTTCACTTCTGAGCTGCCTTTCAAACAAGAGG
ATGATTGTATACCCGAGAAGGGGGAAAAGAGTATCTGCATGGCAGACGCTTAATCGGAGTAGGC
ACAAAGCTAAATTTATTATGCCAATTCGTCTGTCGGTCAAAAATTTGAGGACACCTGACCGTTA
CTTTGTTGATCAATATCTATACAG
						
					

						Genomic sequence
						
							TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGGAGTGTGCTGATATG
CCACTAATTGCTTAACACACCGAGAAGCTTCTCGGCATTTGCCAAATTTGGCTTCCCAAGACAG
GTGCTCGCGGCTAACTATCATCTATTGAAACACTTGAGTTATTTTTGTATTTCTCTACATGTTT
AATAATAAAGCCATTTGATTCCTACTGTTATCGATAACCTCCGCTACCTTTTCATATCCAACAA
ACCATATAAATGTTTCTTCTTTACATCTTCTGTAAACGATGTGCTTACTTCATGATAGTTTAGT
TATTAGGCGTTCATTTGCTTTGACTATTCCCAGCTAAGTCTAACAAACAGGCTACTAGCATGAA
AAGATCAGGTCATCATGCAGCACTCCTTCATGATGTGCACTCTGTTCTGTTTATTTTGTTGCAA
GAATCTAACTTTAGAACCAACCATCTTTTCCATCAACAACAGCTGGCTATTACAATGTTATATG
GGAATAATCTATCCCAAAGGCCCTGAGGTTTCTAGAATGCACAACACATTGTTTGAAGCTTGAT
TTGGTAATTCAAATTTGATAGTATAAGTAGTCTTATGTTTTATGTAAGATACATACACTAGATT
ATGTTTTCTTGTTAGGCCAAAGGGATAATGGTCATGTACCATGCAAATATATCTGCTCCCAATA
TGTTCTGTTCTCTTTTCTAGAGGACTAGTCTGTTTTCTTTGTCTATTTCATCAATGGAAGCTCA
TCTTTTCTGTAGGTCATGGGCATCTATTTCCATAGGCATGGAAGTAAAAATGTTACTTGTGAAG
ACTTTTGTGCACACATGTGTGGTGCAGGTAGGCCTCTTAACCTCCTATTTCTTTTTGAAAGACA
GTAACGAGTATCATGTCTTTATTTATTTGGCCTTTTTGTGAATCAACCATAGTATCATGTCTTT
ATTTACTTGGCCTTCTTGTGAATCTACCAGTGCATGGGTTTTTTCCATGTATAGTTTTTCCGTG
TATATTTAGTTCTGCTGTCATGTTTAAATATCTCACTATCTAGGTTAAGATTTTGCCGGAAAGT
ATGGCAGTAAACTAAATGTTAAAAGTCAGTCCAATATGTTTTGCCAAAGGTGTAAAGCAAGGCC
ATGAACCAAACATACATATTATACTTGGCTTATGTACTATTATCACAGCAGAAATGCATCAATT
TCTGTTAGCACACTGAAATTATGCGCCAAAATTTCTTTTTCTGTTAGTCCTATTTTCTCCTGAT
GTTACAGCTAAGGTCATTTCACAGCACCTTGTGACATCTTAATATGGAGTTAGTTAATATTTGT
AGTTGTGAATTATGTAGATATTAATACATACTATACCCCTTCAAGTCTCCTGTTAAGCTTTGCC
TAATCTGTCTTAAGTTCCCCCTTTCTCCGCTTTCACTGATCCGCTCTTACATCTTGATTAACAT
GTATTGCATTTAGCAATACCCTCTCAAACTAACATGTAAAAGGAGTATCACCTAACAACACCTC
ATAGCATAAGCCCCTACCCATTTAAACCACATCGTGTTTTCTTTGCACCCATTCTTAATCGATA
GTTCTTTCTTTTCCCCGAGGTGGTAAAAGAAGTGTGTTTGCACCCTTCTTAATCAGTAGCTCTC
TCTTTCCCTGAGGTGGTGAAATATACGCTCCTGCATTGGTGAACCTCAAATAGAGGTACTTCAT
GTAGAAGAATCAATGAGAAAGTATTTTCTCATTTGTAAGTATGTCATAGAAAACAGTTGGCTTA
ATGATAAAAATACTTTCTGGTGCTTGTTGGCTTTGAAGAGAAACACTGAGAATCAACAAAGTAT
TTTTACTCGTTATAAAAACTGCCATACTGAAAGTATTTTCTCTGTCAGTACGGCAGTTCTCTTA
ACGAGTGAAAACACACTTTCTGGTGCTTGTTGGCTTTCAAGAGAAACACCAGAAGCTAATAATA
CGTTTAAGTACCCACATTGGAAGCATGATACTCTGTCATAGCATACCCGAACAGATATTTTCGT
TTTTTTCCATAGCATATCTTGCTGTATTTATAGAAAAGGTGGACCATTAAAATCACTACAACAT
ACCATAAGTACCATGTCTAAACAATGAACTCAGCCACTTAAAAATCCAACATCGTTCTTCATGA
TTCTGTGCATTTTTCTTTGATGTTTTCAAACTGCCTTGAGAGGCTATGCACCTAATTTTTTTAT
CTAATACTTTTGTTAGGTTGAACTTTAGTCAGGAAAGGTCTTGGATTCCATCGCAGCTCATGAG
CATGTTGAAGTGGCTGTTATTCCACCTGCAGGTCAATCACCAAGGTAGGCTGTATACCGATAAT
GTTCATTCTCATGCCGGATGAACTAGTTCGTGAACAACACACTTCTCATGGTGGTTGAAGGAAT
GTATATGTGTTCAAAACACTTATCTTCAATTGAAACTTCTATTTACGTAATCGCAGCAGGGGAA
ACCCCCGCTGTTAATTTTCACCAAAAAAAGAGCACATACAATAATTACAAATGGGAAAGAGAAA
ATAAATTGAAACAAAGAAAGCCAGTCTAGGAACTGATCTTCAATTTAACTGAATTCTAAATCAT
GCTTTGGCTTACATATACGTTTAGTTGTGCAGCCTTACACTATCAATTGACTTGCATATTGGTC
CGCTTGCTCTGGTATCCTTTCTTTCTATATAGGTACAAACAACTAATTGCAGTAATTGCTATAA
AGCAACCCCAATGCTAAGATATGTTGCATCGCCAACAATATATCAGCTGTTAGATTGAACTAAT
CCTTAGATATCAGCCGTTACACAAATCAGTCTCATGTATAGACTGGCCCAGCTGGACTCCCCTG
TTCCACTTTTGCCATGTCAGCCCATCCCCCATGCCTTCACTTGGCACCTGGAAGGGATGACTCC
CACACGTGTGTCAGGAGGCGCTCCTTGCCTGTCCTGTCTGTAATTGCGTTAGAAATTGCCATTA
TTCATGATTGATCCCATTTGTTCTCTTGAAAAGCCTTTTTTGAAATTCTTATTTAATCACTTAA
TCAACTTCCATCCCATGGGCATCCAAGCAGAACCTCTGTCTGCACCTGCCTCTCACAGCACGCT
CCTTTTCCTGCTCTTGAACAGCTTTCATTTGTTCATTTTAGGTTTTTTTTTTCAACTATTCTTT
CATCTGACACATTTAATATTGTTGATCTTTGTTTGTATGAAGGTCCCTGCAGTTTTTGGTGGTA
TTGTTTTGCATAATCTGGTCACTAGATGCCTACCAACTGCTTGAGATAGTGCCTGGCAAGAAAA
TCACTGTTCTTTGGCTAAATCTTTACATGGCATCTCTGTTCTGCCATTCTCACCGACATCCAGT
TTTCTTGGAGCTTGGCATCCCCTCCTTGTGCAACTCGTTGCAAGAACAAGTCTCTGCTGGCGTT
CTCTGCAGTTCATCTATATTCTTTTGTTGATGCTCTCTACTTACATAATGCGCTTCTCTATCTG
TGTAAGTGATCGTTCCAACTATACTTGCATCATTCTGTTTTATCTAATCTCTCCTTTTCTTTAC
CCTGTGCACTTAATAGTGTTGTGCTGTTTGTGAAATCCAAGAAACAGAGCTCAAATAAATTCGC
TAGTGTATGTTGCTGTTGGATTGTTCTGCAGCTTTTGCTTCCATTGCTATTAATTTGGGTAAGC
ACTTGGCCTTCCCATTGTCCAGTGATAGATCTACACATGGTAGTGATACATATAACAAGATGGC
TTCAAGAGAGTTGATTGAGTTAAATGAACCCTCTTGCAGCCATATTATTGTTCTTTTTCCTGTT
GTGTCTTTTCACTTAGCCCATTGAATTGTTGTGATGGACAGTGGCTGGGGCTTATTTAATGTGC
CATACGAAAGTAATTATTCCATGTCAAACTGATGATTTGTGTGTTGAAAGACATAAACAAGCTG
GTTTACAGATTTGAATTGTTCTGTAAACTATTCAAATACGCTACCATGTTCTGGATCCTGCTAC
TCTTGGCAATATTAGGATGGATTTCATCATACCCTGTAAATTTGATGTGCTTATTTGCTTAGGG
CTATATAGGAAAACCAATGAGACACCTTTTTGTTAAGATAGAAAACAATATATGCAACTACATG
TCTTAAAGTTCTTTGTAGTAGGTAAACCTTCATAGTTTTTCACTTCTGAGCTGCCTTTCAAACA
AGAGGATGATTGTATACCCGAGAAGGGGGAAAAGAGTATCTGCATGGCAGACGGTAAGGGAAAT
TCTTATTTCTACACATGAAAATGATACTCAATGTTTTGATAAGCTCTGTAAATAAGATTGTCAA
AGTCTGTTTCACAATTTTTCAGCTTAATCGGAGTAGGCACAAAGCTAAATTTATTATGCCAATT
CGTCTGTCGGTCAAAAATTTGAGGACACCTGACCGTTACTTTGTTGATCAATATCTATACAG
						
					

			
		

Sequences
Splice junction sequence	ATCGGAGTAGGCACAAAGCTAAATTTATTATGCCAATTCGTCTGTCGGTCAAAAATTTGAGGAC ACCTGACCGTTACTTTGTTGATCAATATCTATACAGtactacgaggcaagaagcacagagatag ttgaggcaggggaacctttgggagtgtgctgatatgccactaattgcttaacacaccgagaagc ttctcggc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 116 Transcript exons: 28829450-28829498,28833861-28833927 TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGCAATTCGTCTGTCGG TCAAAAATTTGAGGACACCTGACCGTTACTTTGTTGATCAATATCTATACAG Transcript length: 856 Transcript exons: 28829450-28829577,28830230-28830308,28831706-28831797,28 832692-28832970,28833081-28833155,28833628-28833726,2883 3824-28833927 TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGGAGTGTGCTGATATG CCACTAATTGCTTAACACACCGAGAAGCTTCTCGGCATTTGCCAAATTTGGCTTCCCAAGACAG GTCATGGGCATCTATTTCCATAGGCATGGAAGTAAAAATGTTACTTGTGAAGACTTTTGTGCAC ACATGTGTGGTGCAGGTTGAACTTTAGTCAGGAAAGGTCTTGGATTCCATCGCAGCTCATGAGC ATGTTGAAGTGGCTGTTATTCCACCTGCAGGTCAATCACCAAGGTCCCTGCAGTTTTTGGTGGT ATTGTTTTGCATAATCTGGTCACTAGATGCCTACCAACTGCTTGAGATAGTGCCTGGCAAGAAA ATCACTGTTCTTTGGCTAAATCTTTACATGGCATCTCTGTTCTGCCATTCTCACCGACATCCAG TTTTCTTGGAGCTTGGCATCCCCTCCTTGTGCAACTCGTTGCAAGAACAAGTCTCTGCTGGCGT TCTCTGCAGTTCATCTATATTCTTTTGTTGATGCTCTCTACTTACATAATGCGCTTCTCTATCT GTAGCTCAAATAAATTCGCTAGTGTATGTTGCTGTTGGATTGTTCTGCAGCTTTTGCTTCCATT GCTATTAATTTGGTAGGTAAACCTTCATAGTTTTTCACTTCTGAGCTGCCTTTCAAACAAGAGG ATGATTGTATACCCGAGAAGGGGGAAAAGAGTATCTGCATGGCAGACGCTTAATCGGAGTAGGC ACAAAGCTAAATTTATTATGCCAATTCGTCTGTCGGTCAAAAATTTGAGGACACCTGACCGTTA CTTTGTTGATCAATATCTATACAG
Genomic sequence	TACTACGAGGCAAGAAGCACAGAGATAGTTGAGGCAGGGGAACCTTTGGGAGTGTGCTGATATG CCACTAATTGCTTAACACACCGAGAAGCTTCTCGGCATTTGCCAAATTTGGCTTCCCAAGACAG GTGCTCGCGGCTAACTATCATCTATTGAAACACTTGAGTTATTTTTGTATTTCTCTACATGTTT AATAATAAAGCCATTTGATTCCTACTGTTATCGATAACCTCCGCTACCTTTTCATATCCAACAA ACCATATAAATGTTTCTTCTTTACATCTTCTGTAAACGATGTGCTTACTTCATGATAGTTTAGT TATTAGGCGTTCATTTGCTTTGACTATTCCCAGCTAAGTCTAACAAACAGGCTACTAGCATGAA AAGATCAGGTCATCATGCAGCACTCCTTCATGATGTGCACTCTGTTCTGTTTATTTTGTTGCAA GAATCTAACTTTAGAACCAACCATCTTTTCCATCAACAACAGCTGGCTATTACAATGTTATATG GGAATAATCTATCCCAAAGGCCCTGAGGTTTCTAGAATGCACAACACATTGTTTGAAGCTTGAT TTGGTAATTCAAATTTGATAGTATAAGTAGTCTTATGTTTTATGTAAGATACATACACTAGATT ATGTTTTCTTGTTAGGCCAAAGGGATAATGGTCATGTACCATGCAAATATATCTGCTCCCAATA TGTTCTGTTCTCTTTTCTAGAGGACTAGTCTGTTTTCTTTGTCTATTTCATCAATGGAAGCTCA TCTTTTCTGTAGGTCATGGGCATCTATTTCCATAGGCATGGAAGTAAAAATGTTACTTGTGAAG ACTTTTGTGCACACATGTGTGGTGCAGGTAGGCCTCTTAACCTCCTATTTCTTTTTGAAAGACA GTAACGAGTATCATGTCTTTATTTATTTGGCCTTTTTGTGAATCAACCATAGTATCATGTCTTT ATTTACTTGGCCTTCTTGTGAATCTACCAGTGCATGGGTTTTTTCCATGTATAGTTTTTCCGTG TATATTTAGTTCTGCTGTCATGTTTAAATATCTCACTATCTAGGTTAAGATTTTGCCGGAAAGT ATGGCAGTAAACTAAATGTTAAAAGTCAGTCCAATATGTTTTGCCAAAGGTGTAAAGCAAGGCC ATGAACCAAACATACATATTATACTTGGCTTATGTACTATTATCACAGCAGAAATGCATCAATT TCTGTTAGCACACTGAAATTATGCGCCAAAATTTCTTTTTCTGTTAGTCCTATTTTCTCCTGAT GTTACAGCTAAGGTCATTTCACAGCACCTTGTGACATCTTAATATGGAGTTAGTTAATATTTGT AGTTGTGAATTATGTAGATATTAATACATACTATACCCCTTCAAGTCTCCTGTTAAGCTTTGCC TAATCTGTCTTAAGTTCCCCCTTTCTCCGCTTTCACTGATCCGCTCTTACATCTTGATTAACAT GTATTGCATTTAGCAATACCCTCTCAAACTAACATGTAAAAGGAGTATCACCTAACAACACCTC ATAGCATAAGCCCCTACCCATTTAAACCACATCGTGTTTTCTTTGCACCCATTCTTAATCGATA GTTCTTTCTTTTCCCCGAGGTGGTAAAAGAAGTGTGTTTGCACCCTTCTTAATCAGTAGCTCTC TCTTTCCCTGAGGTGGTGAAATATACGCTCCTGCATTGGTGAACCTCAAATAGAGGTACTTCAT GTAGAAGAATCAATGAGAAAGTATTTTCTCATTTGTAAGTATGTCATAGAAAACAGTTGGCTTA ATGATAAAAATACTTTCTGGTGCTTGTTGGCTTTGAAGAGAAACACTGAGAATCAACAAAGTAT TTTTACTCGTTATAAAAACTGCCATACTGAAAGTATTTTCTCTGTCAGTACGGCAGTTCTCTTA ACGAGTGAAAACACACTTTCTGGTGCTTGTTGGCTTTCAAGAGAAACACCAGAAGCTAATAATA CGTTTAAGTACCCACATTGGAAGCATGATACTCTGTCATAGCATACCCGAACAGATATTTTCGT TTTTTTCCATAGCATATCTTGCTGTATTTATAGAAAAGGTGGACCATTAAAATCACTACAACAT ACCATAAGTACCATGTCTAAACAATGAACTCAGCCACTTAAAAATCCAACATCGTTCTTCATGA TTCTGTGCATTTTTCTTTGATGTTTTCAAACTGCCTTGAGAGGCTATGCACCTAATTTTTTTAT CTAATACTTTTGTTAGGTTGAACTTTAGTCAGGAAAGGTCTTGGATTCCATCGCAGCTCATGAG CATGTTGAAGTGGCTGTTATTCCACCTGCAGGTCAATCACCAAGGTAGGCTGTATACCGATAAT GTTCATTCTCATGCCGGATGAACTAGTTCGTGAACAACACACTTCTCATGGTGGTTGAAGGAAT GTATATGTGTTCAAAACACTTATCTTCAATTGAAACTTCTATTTACGTAATCGCAGCAGGGGAA ACCCCCGCTGTTAATTTTCACCAAAAAAAGAGCACATACAATAATTACAAATGGGAAAGAGAAA ATAAATTGAAACAAAGAAAGCCAGTCTAGGAACTGATCTTCAATTTAACTGAATTCTAAATCAT GCTTTGGCTTACATATACGTTTAGTTGTGCAGCCTTACACTATCAATTGACTTGCATATTGGTC CGCTTGCTCTGGTATCCTTTCTTTCTATATAGGTACAAACAACTAATTGCAGTAATTGCTATAA AGCAACCCCAATGCTAAGATATGTTGCATCGCCAACAATATATCAGCTGTTAGATTGAACTAAT CCTTAGATATCAGCCGTTACACAAATCAGTCTCATGTATAGACTGGCCCAGCTGGACTCCCCTG TTCCACTTTTGCCATGTCAGCCCATCCCCCATGCCTTCACTTGGCACCTGGAAGGGATGACTCC CACACGTGTGTCAGGAGGCGCTCCTTGCCTGTCCTGTCTGTAATTGCGTTAGAAATTGCCATTA TTCATGATTGATCCCATTTGTTCTCTTGAAAAGCCTTTTTTGAAATTCTTATTTAATCACTTAA TCAACTTCCATCCCATGGGCATCCAAGCAGAACCTCTGTCTGCACCTGCCTCTCACAGCACGCT CCTTTTCCTGCTCTTGAACAGCTTTCATTTGTTCATTTTAGGTTTTTTTTTTCAACTATTCTTT CATCTGACACATTTAATATTGTTGATCTTTGTTTGTATGAAGGTCCCTGCAGTTTTTGGTGGTA TTGTTTTGCATAATCTGGTCACTAGATGCCTACCAACTGCTTGAGATAGTGCCTGGCAAGAAAA TCACTGTTCTTTGGCTAAATCTTTACATGGCATCTCTGTTCTGCCATTCTCACCGACATCCAGT TTTCTTGGAGCTTGGCATCCCCTCCTTGTGCAACTCGTTGCAAGAACAAGTCTCTGCTGGCGTT CTCTGCAGTTCATCTATATTCTTTTGTTGATGCTCTCTACTTACATAATGCGCTTCTCTATCTG TGTAAGTGATCGTTCCAACTATACTTGCATCATTCTGTTTTATCTAATCTCTCCTTTTCTTTAC CCTGTGCACTTAATAGTGTTGTGCTGTTTGTGAAATCCAAGAAACAGAGCTCAAATAAATTCGC TAGTGTATGTTGCTGTTGGATTGTTCTGCAGCTTTTGCTTCCATTGCTATTAATTTGGGTAAGC ACTTGGCCTTCCCATTGTCCAGTGATAGATCTACACATGGTAGTGATACATATAACAAGATGGC TTCAAGAGAGTTGATTGAGTTAAATGAACCCTCTTGCAGCCATATTATTGTTCTTTTTCCTGTT GTGTCTTTTCACTTAGCCCATTGAATTGTTGTGATGGACAGTGGCTGGGGCTTATTTAATGTGC CATACGAAAGTAATTATTCCATGTCAAACTGATGATTTGTGTGTTGAAAGACATAAACAAGCTG GTTTACAGATTTGAATTGTTCTGTAAACTATTCAAATACGCTACCATGTTCTGGATCCTGCTAC TCTTGGCAATATTAGGATGGATTTCATCATACCCTGTAAATTTGATGTGCTTATTTGCTTAGGG CTATATAGGAAAACCAATGAGACACCTTTTTGTTAAGATAGAAAACAATATATGCAACTACATG TCTTAAAGTTCTTTGTAGTAGGTAAACCTTCATAGTTTTTCACTTCTGAGCTGCCTTTCAAACA AGAGGATGATTGTATACCCGAGAAGGGGGAAAAGAGTATCTGCATGGCAGACGGTAAGGGAAAT TCTTATTTCTACACATGAAAATGATACTCAATGTTTTGATAAGCTCTGTAAATAAGATTGTCAA AGTCTGTTTCACAATTTTTCAGCTTAATCGGAGTAGGCACAAAGCTAAATTTATTATGCCAATT CGTCTGTCGGTCAAAAATTTGAGGACACCTGACCGTTACTTTGTTGATCAATATCTATACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_003231* osi_circ_009224 						
					
						PMCS
						0.305182529

Conservation Information
Conserved circRNAs	osi_circ_003231* osi_circ_009224
PMCS	0.305182529

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							28833680-28829474(+)
						
						Potential amino acid sequence
						
							MIVYPRRGKRVSAWQTLNRSRHKAKFIMPIRLSVKNLRTPDRYFVDQYLYSTTRQEAQR*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	28833680-28829474(+)
Potential amino acid sequence	MIVYPRRGKRVSAWQTLNRSRHKAKFIMPIRLSVKNLRTPDRYFVDQYLYSTTRQEAQR*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os11g0704550_circ_g.2

Address

Any questions?

Supported by