Splice junction sequence |
TTCCTAAAGAAAGCCATCTCGTCTCATGAAATCAGCAATTAAAGTAAGCGCTCTCCTTGCAGTC GACAACAGCCACAATTCTTCTAACGTCTCAGTAGAActtttggtttttacgatttttcccatca tctatatcttcactgtcttcactctctacataagagactttacgaactgatcgggtggagctgc gaacttca
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 1316 Transcript exons: 5553937-5554356,5554576-5554643,5554799-5555626 CTTTTGGTTTTTACGATTTTTCCCATCATCTATATCTTCACTGTCTTCACTCTCTACATAAGAG ACTTTACGAACTGATCGGGTGGAGCTGCGAACTTCACTACTCTGTCCTATGGTATTGGTGGACC TTCCATTGTTTTGTCGGAGAGTTGTGCCTCTTCTGGCCAGGCTTCTAAAACCCTCATCATTGTC ATTTTCAGAGTCTTCCTCTGAGTCGTCATCTTGATATGATGTTTTCCTCTTTTGTCGACTAGAA ACATGGAATGATTTTCGTTCGAGTCCAGCGCTTGATTTCCGGAAACCTTTACTTTGTTGCCTAA CCTTGGGCTTTTTTGTTCCGTAGTCGTCCTCGTAATCGGAAAGATCAATTTCTTCATCACTCTC AGGGTCTTCATCAGAAACGTCCCAACCTTGGCCATGCTTTTTACTTGCACCACCATCATCAGCA GCATCATAGGGCTCAAAGTCAGCATCTTCAGGGTCATCCTCATCTTCCTCCTCTTCATAGTCCA TATCAGCATCCCCATTGTGGTCATGATTACTATCACTATAGTGAATGTTTTTGTGAATTGCTCT TGAAGTCCTTGAGTTGCTATGGACAGCAGATCCTGCCTTTGGCAGTGATCTAGAATTTGTAGGA TTACTATACCCTTTGTAGTGCACATGGTCGCTTTGATTATCTTCATCTTGTTCATAATATTCAT CAGACAACATTTCATCTGCTGGGACATCAGCTTGACCACTTTGATGCTTGTTCATTTCATTATC CTCCTCCTCATTTTCATTATCATTTTCATTTTCAGAATCTAACTTTTCACTCCGGTCATTTGAG TGATTATCTTCACTATGATATGCTTCTTTGTAACCGGATTGTGAATCTTTGGCAGGATCAGAAC CCTCTCTTTGTCCCATTGGCTGACAATCTTTCCAAAATGTGGAACCCCATCTACCAGTTACACC CAATCTCTTTGTCGAAGATTGATAATGGGAATCCACAGGATCAGCTACATTATCAACTGCTGTC TCATTTGGCTGCCTAATACTACATCCTGGTTCTGGGTCACTTTGATACTGTACGTCCATGTTCA TGTCAAAGCCTCTTTCACTATAAGTACCATCCACATCTTCATTCAAAGGTGAACTCTGAAAAGT AGCAGCATTTTGCCGCTCCTCATTTTCATCAAGAACATTATGTGACACAGTATCGTTTGAGTAG TTCCTAAAGAAAGCCATCTCGTCTCATGAAATCAGCAATTAAAGTAAGCGCTCTCCTTGCAGTC GACAACAGCCACAATTCTTCTAACGTCTCAGTAGAA
|
Genomic sequence |
CTTTTGGTTTTTACGATTTTTCCCATCATCTATATCTTCACTGTCTTCACTCTCTACATAAGAG ACTTTACGAACTGATCGGGTGGAGCTGCGAACTTCACTACTCTGTCCTATGGTATTGGTGGACC TTCCATTGTTTTGTCGGAGAGTTGTGCCTCTTCTGGCCAGGCTTCTAAAACCCTCATCATTGTC ATTTTCAGAGTCTTCCTCTGAGTCGTCATCTTGATATGATGTTTTCCTCTTTTGTCGACTAGAA ACATGGAATGATTTTCGTTCGAGTCCAGCGCTTGATTTCCGGAAACCTTTACTTTGTTGCCTAA CCTTGGGCTTTTTTGTTCCGTAGTCGTCCTCGTAATCGGAAAGATCAATTTCTTCATCACTCTC AGGGTCTTCATCAGAAACGTCCCAACCTTGGCCATGCTAAAATCAAACAACCACACAGTTGTAA CATGTAAGAAATCCCATCAAAACTATAACAAGTAACAAGCTAGAACACAACATGTTAACTATAA ATGAAGATCCTTCCGAATAGCAAACTTAGTTAAGAAATGGTTCAGAAAGTATCTCCCTTCTTTT GTTCAGTTTTAGCTTCATTGTGATGAACATGTATCCCAACACAAGAATTGTAAGAAGTCAAACC TTTTTACTTGCACCACCATCATCAGCAGCATCATAGGGCTCAAAGTCAGCATCTTCAGGGTCAT CCTCTGATGAGAAATAAGATCAAATGTTACTGAAGTTCAAACCAAGCACTTGACGTGGGAAGTA TTCAGAGGAAAAAACATAGACGTAAGTTCTAGTACTGCGTACAAACAAACAACAGAGTCAAATC TATTTAGGAATCCAAATTAAAAGAGTTTACCATCTTCCTCCTCTTCATAGTCCATATCAGCATC CCCATTGTGGTCATGATTACTATCACTATAGTGAATGTTTTTGTGAATTGCTCTTGAAGTCCTT GAGTTGCTATGGACAGCAGATCCTGCCTTTGGCAGTGATCTAGAATTTGTAGGATTACTATACC CTTTGTAGTGCACATGGTCGCTTTGATTATCTTCATCTTGTTCATAATATTCATCAGACAACAT TTCATCTGCTGGGACATCAGCTTGACCACTTTGATGCTTGTTCATTTCATTATCCTCCTCCTCA TTTTCATTATCATTTTCATTTTCAGAATCTAACTTTTCACTCCGGTCATTTGAGTGATTATCTT CACTATGATATGCTTCTTTGTAACCGGATTGTGAATCTTTGGCAGGATCAGAACCCTCTCTTTG TCCCATTGGCTGACAATCTTTCCAAAATGTGGAACCCCATCTACCAGTTACACCCAATCTCTTT GTCGAAGATTGATAATGGGAATCCACAGGATCAGCTACATTATCAACTGCTGTCTCATTTGGCT GCCTAATACTACATCCTGGTTCTGGGTCACTTTGATACTGTACGTCCATGTTCATGTCAAAGCC TCTTTCACTATAAGTACCATCCACATCTTCATTCAAAGGTGAACTCTGAAAAGTAGCAGCATTT TGCCGCTCCTCATTTTCATCAAGAACATTATGTGACACAGTATCGTTTGAGTAGTTCCTAAAGA AAGCCATCTCGTCTCATGAAATCAGCAATTAAAGTAAGCGCTCTCCTTGCAGTCGACAACAGCC ACAATTCTTCTAACGTCTCAGTAGAA |