Plant Circular RNA Database

Detail information of BGIOSGA034174_circ_g.5

			
						 General Information
					
						CircRNA Name
						BGIOSGA034174_circ_g.5
					
						ID in PlantcircBase
						osi_circ_003105
					
						Alias
						11:7692750|7697485
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr11: 7692750-7697485  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA034174						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA034174_circ_g.3 BGIOSGA034174_circ_g.4 BGIOSGA034174_circ_g.6 BGIOSGA034174_circ_g.7 BGIOSGA034174_circ_g.8 BGIOSGA034174_circ_g.9 BGIOSGA034174_circ_g.10 BGIOSGA034174_circ_g.11 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA034174-TA:6

General Information
CircRNA Name	BGIOSGA034174_circ_g.5
ID in PlantcircBase	osi_circ_003105
Alias	11:7692750\|7697485
Organism	Oryza sativa ssp. indica
Position	chr11: 7692750-7697485 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA034174
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA034174_circ_g.3 BGIOSGA034174_circ_g.4 BGIOSGA034174_circ_g.6 BGIOSGA034174_circ_g.7 BGIOSGA034174_circ_g.8 BGIOSGA034174_circ_g.9 BGIOSGA034174_circ_g.10 BGIOSGA034174_circ_g.11
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA034174-TA:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTAGATCCAGATGATTCGAGTCGATGTTTGTAGTTTGAGCATTCACATAATCCTCCAATAAATT
AATAGCTTTATCAATTTGACCACAGTCCCTGTACATctttcgattagcatactcaatattcagt
gtttcaagaatgggtataagaatggtgcccacaaagtcctcgaacatgcctttattgtaatata
tgttcgca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTCGATTAGCATACTCAATATTCAGTGTTTCAAGAATGGGTATAAGAATGGTGCCCACAAAG
TCCTCGAACATGCCTTTATTGTAATATATGTTCGCAAGGTGCATCTTTACTTTCCCATCAAGCC
ACCATGGCTTCGGTTGATCTGTAGCAGACTTTGACCCTACAAATGCCATTAAAAAAAAAACTGA
ACAACGAAAGCAGCTAATTGCATTGAACAAGCTAGGGATAGTATACCTGAATTGTTAGGAGGAG
AAAGCAAAACAATAGCTTCGTCACTCTTATCCACATCAACAAAAAGAGAGGATAAAGTTATTCG
CACATCAATGTTGTCCTCCATTCTTTGCAAGGCTATGAAAGAATAAAGAAAACTACATCAAAGA
TTCAAAATTGATAATAATGGAAAAAACTAACTCAAAAGAAATTAAATAAACAAAACCTCATGCC
GAGGATGTTGAATTCCCAGCATTAGGGGTAACCGCTCCTTTACATAGATTCAAACCTCACATAT
GTTCTAAAAATTCTAAATGAATATACCTTCCAAATTCACAATCTTATATGTTATGGACATTGAT
TCATGGATAGGATAAGGGTCTGAAACAGGGATAAAGGTGAGATCGCTCTCATCGGTGTTAGCCT
TGTCCCGATCATCAGGAGACACTAATACATAAGGTTAGGCCTAGCTTGATCAGAGTCTCCTAGT
GATCAGGACGAGCCCAGCACCAACAATAGCAATATTGTTTACATCCCAACTTTGAATAATTGTC
ATTTCTATTGCACAAATCTCAGAGCAATTCAAATGGATAGTATAGCAGGAGTACATGAAAGTCC
AGAAATGTGGACTTACATTTCTCAAAAGAACCTTAGAAATACATGTAACACCCCAGCAACTACA
ATAAGCCTGAGACGTTACTAAACAACCATGAAACAATGCCAAAACATTGAAATTCTGCAGAATC
TTCTCACAAAGAAAAGTATTATGGAAGCATCAATATATAGATATGATATAATCTAGAGCCAACA
GCATGCTAACAAGTAAAAACAAACTAAGCAAAGTTAGATAAACCAAGTTTTACGTCTCAAGTGT
TCATTTAAACTATTAACTCCATAAGTACATCTATTCTTCATAAATATGATAGCACAACATTTAA
AAATTAAATAGGAACATGGCGTGCAAAAGTTTTGGTACTCCCAACCTCTAAAGTAGGCATGCCA
CATCAAATACCTGGAAAGGCTGTAAGGGTGTGAGGATAAATCTCAACTAGCGAACAGCTTTAAC
AAATTCTTTAAACTACAAGTTCATTAGGTCATGATATAAATACAGGAGTACAAGATCATTTTAA
GTAATTGTCATTCTGTCAGACCATAATGAAAACGAAATTTCCGTTTTTCTTCTAGACGAATACG
ATATTGCTATCTTTTAAAGATACTTTAGGATCTAGGTATTTTACTAGTTAGTCCCGGTAAAGCT
CCCAGACGGCGTATTTTTCGAAACGAGGTCCTCAGTAACGAGACATAAAGACTCCTTTTTTTTT
CCTTTTTTTTCTTTTTCGTATAAAATCCAAATGAAAACTGAAAAAACAAGTTAAAACTTGCAAA
TAAACAAACTTCATAACTTCATGAGTGAAAATAAAGCAACATTGTGAGAAGCAAACACATCTCA
GATATAACTCCAATTGTATAACTTCCATACGAGAATTGCAATAAGTTATGTAGAGTGGCTTCCA
TAGGAAAACACCTATTGCAGTTTTGCTAGATGTTATACAATCGGGGTTATCTTTGAGAAGAGTT
TGCTTCTTGAGAAGTTATGCAGATGTGGCTTTACTTTCACCAATGAAGTTATAAAGTTTATGTA
AAAGTTTAACTTAATTTTTTTAATGAGGTTGCACTCTCGTATTTAAATAATCACCTAATGAACT
TGTAGCTTAAATAAACTGTTAAAGCAGTTTGCTTGCTGAGCAATCCTTCTAGGTACTTGATGTG
GCATGCTTGCTTGAGGGGATGGGAGTAGCAACACACTTCTGCACGTCATGTTCACATTTAATCT
TTAAATGTTAAGTTGTCATTTTAATAAACCATAATGTATTTATTGAGTTAATAGGCTAAATGAA
CACTTGAGATGTAAAACTTAGTCTATTTATCTTTGTTTAGGTTGTTTTACTTGTTAGCATGTTT
TTTGCTCCTGATTATATTACCAGCATCTTAGGCTTGTTGTAATTGCTAGGGTGTTACAATATTT
TTTTTATATTTGTTCTGTTTTGTCTTAGGCTTGTTGTAATACAATATTTTTTTTTCATTTGTTC
TGATTTGTCTTTTCTGTATGGCCATGTCATGTCTGCATTTCTCAGAATCCTAGAATGTCTCGTG
ACTCTTGTCTATGATTTAAGAAACTCAATCTCCATAAAGTCCATTCAAATAACAGTCACCACCC
CTGACAATAGAATTTATTCTCTCTTTTGTAATACCATATTCTAACGATTTTGAGAACAATGCAT
AGAATCTGGTGTAGGGAATGCAAAGCAGAACAATTATGGAATATTATGAGAATATCAGAAAGCA
AATTGATTCAGAAAAGAAGAGACAGGGCATAAGATCCTCTCCATGTAATACTACTTTCAAAGCT
CCAACAAAACATTGCTGTGACGGATTTTCACCAGCATTATCTTTTTATGTATATCTTAACTTCT
TAAGCAATCTCAAGTTTGCTACCAAAGAGGAAGGGTTTCATGAAGGAAATAGAACAGAACCTTT
CTGAAAGTAAGGAATTGCTTTCCTTTTCTCCCCTATGACCATGTAGCATTGACCAACTTTCACA
TATGAACTACCCTGAAACAAGTTATAGTATATCAAACTAGAGAAGGGTGAAGGAAATAAAATAT
ACATACAACTTCCTCAATCCCTTAATGGACTAGGTGATTGCGATGGTGTGCTTTACACCCATCC
TTTCATTTCCAAAATATCATTTATTGATGGATTTCTGTAGGCATGTATTTATAGAATCTTTTAT
GAAGGACTGCATCCTTTGTACATGTGTAAGCAAGTGACTAGTTGATCCATTGTGAATTAGAATG
TTTTCTGTAGATTTTTAAATACCTTTTTTTTATGAAGCATTAAAGCAGACAAAGCCCATTCCCC
ATTCCTGATCATGGTACCATTATCAAGCCTTTAAAGAGCATGTACATTCTAATCAAATTTGGAA
CATTTGTGGCTAGCTAGAAGATCTACATGCTGTTAAAAGCACATTCTCAAATGATTAATTGATT
TTTTTTATCATATTTATGTTCAAATCAGCTAATAGGAACTGCTTTGCCCCCAACTTCTTTCAGT
AGCAGTTGCCTGGCTTCACCTCTTCTGGGTTACGTAGTTACATAATTTTATTCCACTATAACTC
ACGACTAATGGATAGGTTCAAATTTATTATGTTGAGATGGGCTTCCTTCCCCTTCCAAAAATTA
TACTCATTGGAATCAAACCAGATGTTTGTTTCCAATTACCAAGTCTATCATAATTGTATTATGC
ACTTATAGCATTACCTTGATAAGTTATATATGTCAAAAGATTCACAGGATTGAATTGATCTTCT
GAAGACTTCACAGCATTTAGGAAAAAGTTCGCTTAACACTTTGTGGTTAGTCAATGTGGACAAT
GACGTGGTGGGTGGTGTTGCTTGCATGACACACACACCAAAGCATGTTTCACCCAAGTTTGCCC
AAGCAATCACTTTCTTTAGTCAGCAAGCCCAGAAACCACCTCCAGTGCTATTTGTACTTCTTCT
CCAAGCTATTCTGCTAGTTAAAAAATATTTAACTGAATCCATCACCATGTCACTGTTCTCGTCA
TCGTCCACGTGGGGAAAACACTTACAATACAACTCCAGGGGGGAGGGGGGGGTTTCAAATAGTT
GTTCATGCGTTGGGGAGTAGAATATCAGGTTTTGTACTTCAGGGGGTTAAGTAGAGGTTTTGGC
TTTTTGCCATTATTTATAAATCATATGGTCCTAATTATCATTTGTTCCATGCTTAATTGAACGC
TAGAAACATGTAATAGTGAAACAGAACTTCAAAATGAAGCAAATCGGCTACTTACATCATTATG
AACAGCAACATCTTCAATCATCAGGTAAAACTTTATTGCATACTCATATTGTCCTAAATTTTCG
AGAGTGCTAGCAACCTCCTTGATCACATCGGTGTTATCTTTTGAACGCTCCAGATGCACATTCT
GAAGAAACACCTGCACAAGTAATACCAATTCAATAACTAAGAAACTCAAAACTATACGTTGAAG
TAGTCTTGGATACAGTATATACACAAGCACAATCTAATCTTGCAGAGTACAACCTGTTATCAGA
GCAATTTATAGTCATATCGAGGATTTATAGTGTCTAATAAACCAATGGTAGCAAAAGGTGGGTT
TTGACTAATCAAGGATAAATTATGTCAAGTGTGTGCTATAATGGAACAGAACTGGGACAAACCT
CGGCATGCTTCATATCTCCAAGATAAGCATGGCAGATTACAGCTTTTGCCTGCAATTGTACTGG
CAAATTGTGTTGAGATCCAAACACTATATGTGCTCTATCAATCAGCCTCAATGCTTCATTATAG
GCATTATTTCTCAGATAAAGGGATATCAGTAGATCCAGATGATTCGAGTCGATGTTTGTAGTTT
GAGCATTCACATAATCCTCCAATAAATTAATAGCTTTATCAATTTGACCACAGTCCCTGTACAT
						
					

			
		

Sequences
Splice junction sequence	GTAGATCCAGATGATTCGAGTCGATGTTTGTAGTTTGAGCATTCACATAATCCTCCAATAAATT AATAGCTTTATCAATTTGACCACAGTCCCTGTACATctttcgattagcatactcaatattcagt gtttcaagaatgggtataagaatggtgcccacaaagtcctcgaacatgcctttattgtaatata tgttcgca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTCGATTAGCATACTCAATATTCAGTGTTTCAAGAATGGGTATAAGAATGGTGCCCACAAAG TCCTCGAACATGCCTTTATTGTAATATATGTTCGCAAGGTGCATCTTTACTTTCCCATCAAGCC ACCATGGCTTCGGTTGATCTGTAGCAGACTTTGACCCTACAAATGCCATTAAAAAAAAAACTGA ACAACGAAAGCAGCTAATTGCATTGAACAAGCTAGGGATAGTATACCTGAATTGTTAGGAGGAG AAAGCAAAACAATAGCTTCGTCACTCTTATCCACATCAACAAAAAGAGAGGATAAAGTTATTCG CACATCAATGTTGTCCTCCATTCTTTGCAAGGCTATGAAAGAATAAAGAAAACTACATCAAAGA TTCAAAATTGATAATAATGGAAAAAACTAACTCAAAAGAAATTAAATAAACAAAACCTCATGCC GAGGATGTTGAATTCCCAGCATTAGGGGTAACCGCTCCTTTACATAGATTCAAACCTCACATAT GTTCTAAAAATTCTAAATGAATATACCTTCCAAATTCACAATCTTATATGTTATGGACATTGAT TCATGGATAGGATAAGGGTCTGAAACAGGGATAAAGGTGAGATCGCTCTCATCGGTGTTAGCCT TGTCCCGATCATCAGGAGACACTAATACATAAGGTTAGGCCTAGCTTGATCAGAGTCTCCTAGT GATCAGGACGAGCCCAGCACCAACAATAGCAATATTGTTTACATCCCAACTTTGAATAATTGTC ATTTCTATTGCACAAATCTCAGAGCAATTCAAATGGATAGTATAGCAGGAGTACATGAAAGTCC AGAAATGTGGACTTACATTTCTCAAAAGAACCTTAGAAATACATGTAACACCCCAGCAACTACA ATAAGCCTGAGACGTTACTAAACAACCATGAAACAATGCCAAAACATTGAAATTCTGCAGAATC TTCTCACAAAGAAAAGTATTATGGAAGCATCAATATATAGATATGATATAATCTAGAGCCAACA GCATGCTAACAAGTAAAAACAAACTAAGCAAAGTTAGATAAACCAAGTTTTACGTCTCAAGTGT TCATTTAAACTATTAACTCCATAAGTACATCTATTCTTCATAAATATGATAGCACAACATTTAA AAATTAAATAGGAACATGGCGTGCAAAAGTTTTGGTACTCCCAACCTCTAAAGTAGGCATGCCA CATCAAATACCTGGAAAGGCTGTAAGGGTGTGAGGATAAATCTCAACTAGCGAACAGCTTTAAC AAATTCTTTAAACTACAAGTTCATTAGGTCATGATATAAATACAGGAGTACAAGATCATTTTAA GTAATTGTCATTCTGTCAGACCATAATGAAAACGAAATTTCCGTTTTTCTTCTAGACGAATACG ATATTGCTATCTTTTAAAGATACTTTAGGATCTAGGTATTTTACTAGTTAGTCCCGGTAAAGCT CCCAGACGGCGTATTTTTCGAAACGAGGTCCTCAGTAACGAGACATAAAGACTCCTTTTTTTTT CCTTTTTTTTCTTTTTCGTATAAAATCCAAATGAAAACTGAAAAAACAAGTTAAAACTTGCAAA TAAACAAACTTCATAACTTCATGAGTGAAAATAAAGCAACATTGTGAGAAGCAAACACATCTCA GATATAACTCCAATTGTATAACTTCCATACGAGAATTGCAATAAGTTATGTAGAGTGGCTTCCA TAGGAAAACACCTATTGCAGTTTTGCTAGATGTTATACAATCGGGGTTATCTTTGAGAAGAGTT TGCTTCTTGAGAAGTTATGCAGATGTGGCTTTACTTTCACCAATGAAGTTATAAAGTTTATGTA AAAGTTTAACTTAATTTTTTTAATGAGGTTGCACTCTCGTATTTAAATAATCACCTAATGAACT TGTAGCTTAAATAAACTGTTAAAGCAGTTTGCTTGCTGAGCAATCCTTCTAGGTACTTGATGTG GCATGCTTGCTTGAGGGGATGGGAGTAGCAACACACTTCTGCACGTCATGTTCACATTTAATCT TTAAATGTTAAGTTGTCATTTTAATAAACCATAATGTATTTATTGAGTTAATAGGCTAAATGAA CACTTGAGATGTAAAACTTAGTCTATTTATCTTTGTTTAGGTTGTTTTACTTGTTAGCATGTTT TTTGCTCCTGATTATATTACCAGCATCTTAGGCTTGTTGTAATTGCTAGGGTGTTACAATATTT TTTTTATATTTGTTCTGTTTTGTCTTAGGCTTGTTGTAATACAATATTTTTTTTTCATTTGTTC TGATTTGTCTTTTCTGTATGGCCATGTCATGTCTGCATTTCTCAGAATCCTAGAATGTCTCGTG ACTCTTGTCTATGATTTAAGAAACTCAATCTCCATAAAGTCCATTCAAATAACAGTCACCACCC CTGACAATAGAATTTATTCTCTCTTTTGTAATACCATATTCTAACGATTTTGAGAACAATGCAT AGAATCTGGTGTAGGGAATGCAAAGCAGAACAATTATGGAATATTATGAGAATATCAGAAAGCA AATTGATTCAGAAAAGAAGAGACAGGGCATAAGATCCTCTCCATGTAATACTACTTTCAAAGCT CCAACAAAACATTGCTGTGACGGATTTTCACCAGCATTATCTTTTTATGTATATCTTAACTTCT TAAGCAATCTCAAGTTTGCTACCAAAGAGGAAGGGTTTCATGAAGGAAATAGAACAGAACCTTT CTGAAAGTAAGGAATTGCTTTCCTTTTCTCCCCTATGACCATGTAGCATTGACCAACTTTCACA TATGAACTACCCTGAAACAAGTTATAGTATATCAAACTAGAGAAGGGTGAAGGAAATAAAATAT ACATACAACTTCCTCAATCCCTTAATGGACTAGGTGATTGCGATGGTGTGCTTTACACCCATCC TTTCATTTCCAAAATATCATTTATTGATGGATTTCTGTAGGCATGTATTTATAGAATCTTTTAT GAAGGACTGCATCCTTTGTACATGTGTAAGCAAGTGACTAGTTGATCCATTGTGAATTAGAATG TTTTCTGTAGATTTTTAAATACCTTTTTTTTATGAAGCATTAAAGCAGACAAAGCCCATTCCCC ATTCCTGATCATGGTACCATTATCAAGCCTTTAAAGAGCATGTACATTCTAATCAAATTTGGAA CATTTGTGGCTAGCTAGAAGATCTACATGCTGTTAAAAGCACATTCTCAAATGATTAATTGATT TTTTTTATCATATTTATGTTCAAATCAGCTAATAGGAACTGCTTTGCCCCCAACTTCTTTCAGT AGCAGTTGCCTGGCTTCACCTCTTCTGGGTTACGTAGTTACATAATTTTATTCCACTATAACTC ACGACTAATGGATAGGTTCAAATTTATTATGTTGAGATGGGCTTCCTTCCCCTTCCAAAAATTA TACTCATTGGAATCAAACCAGATGTTTGTTTCCAATTACCAAGTCTATCATAATTGTATTATGC ACTTATAGCATTACCTTGATAAGTTATATATGTCAAAAGATTCACAGGATTGAATTGATCTTCT GAAGACTTCACAGCATTTAGGAAAAAGTTCGCTTAACACTTTGTGGTTAGTCAATGTGGACAAT GACGTGGTGGGTGGTGTTGCTTGCATGACACACACACCAAAGCATGTTTCACCCAAGTTTGCCC AAGCAATCACTTTCTTTAGTCAGCAAGCCCAGAAACCACCTCCAGTGCTATTTGTACTTCTTCT CCAAGCTATTCTGCTAGTTAAAAAATATTTAACTGAATCCATCACCATGTCACTGTTCTCGTCA TCGTCCACGTGGGGAAAACACTTACAATACAACTCCAGGGGGGAGGGGGGGGTTTCAAATAGTT GTTCATGCGTTGGGGAGTAGAATATCAGGTTTTGTACTTCAGGGGGTTAAGTAGAGGTTTTGGC TTTTTGCCATTATTTATAAATCATATGGTCCTAATTATCATTTGTTCCATGCTTAATTGAACGC TAGAAACATGTAATAGTGAAACAGAACTTCAAAATGAAGCAAATCGGCTACTTACATCATTATG AACAGCAACATCTTCAATCATCAGGTAAAACTTTATTGCATACTCATATTGTCCTAAATTTTCG AGAGTGCTAGCAACCTCCTTGATCACATCGGTGTTATCTTTTGAACGCTCCAGATGCACATTCT GAAGAAACACCTGCACAAGTAATACCAATTCAATAACTAAGAAACTCAAAACTATACGTTGAAG TAGTCTTGGATACAGTATATACACAAGCACAATCTAATCTTGCAGAGTACAACCTGTTATCAGA GCAATTTATAGTCATATCGAGGATTTATAGTGTCTAATAAACCAATGGTAGCAAAAGGTGGGTT TTGACTAATCAAGGATAAATTATGTCAAGTGTGTGCTATAATGGAACAGAACTGGGACAAACCT CGGCATGCTTCATATCTCCAAGATAAGCATGGCAGATTACAGCTTTTGCCTGCAATTGTACTGG CAAATTGTGTTGAGATCCAAACACTATATGTGCTCTATCAATCAGCCTCAATGCTTCATTATAG GCATTATTTCTCAGATAAAGGGATATCAGTAGATCCAGATGATTCGAGTCGATGTTTGTAGTTT GAGCATTCACATAATCCTCCAATAAATTAATAGCTTTATCAATTTGACCACAGTCCCTGTACAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_009038* 						
					
						PMCS

Conservation Information
Conserved circRNAs	osa_circ_009038*
PMCS

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							7697487-7692752(-)
7692765-7697430(-)
						
						Potential amino acid sequence
						
							MYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNL
PVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIE
DVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESM
SITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDG
KVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYANRKMYRDCGQIDKAINLLEDYVNAQTTN
IDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFL
QNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKR
KAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITL
SSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILI
PILETLNIEYANRKMYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRL
IDRAHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENL
GQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLT
FIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGS
KSATDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYANRKMYRDCGQIDKA
INLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNLPVQLQAKAVIC
HAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVHNDGSSY
VKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESMSITYKIVNLEA
LQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDGKVKMHLANIYY
NKGMFEDFVGTILIPILETLNIEYANRK(-)
MLIERCTGTVVKLIKLLIYWRIM*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	7697487-7692752(-) 7692765-7697430(-)
Potential amino acid sequence	MYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNL PVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIE DVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESM SITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDG KVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYANRKMYRDCGQIDKAINLLEDYVNAQTTN IDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFL QNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKR KAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITL SSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILI PILETLNIEYANRKMYRDCGQIDKAINLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRL IDRAHIVFGSQHNLPVQLQAKAVICHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENL GQYEYAIKFYLMIEDVAVHNDGSSYVKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLT FIPVSDPYPIHESMSITYKIVNLEALQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGS KSATDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYANRKMYRDCGQIDKA INLLEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIDRAHIVFGSQHNLPVQLQAKAVIC HAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVHNDGSSY VKVGQCYMVIGEKRKAIPYFQKVSPDDRDKANTDESDLTFIPVSDPYPIHESMSITYKIVNLEA LQRMEDNIDVRITLSSLFVDVDKSDEAIVLLSPPNNSGSKSATDQPKPWWLDGKVKMHLANIYY NKGMFEDFVGTILIPILETLNIEYANRK(-) MLIERCTGTVVKLIKLLIYWRIM*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA034174_circ_g.5

Address

Any questions?

Supported by