Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA034174_circ_g.6 |
ID in PlantcircBase | osi_circ_009495 |
Alias | Chr11:9476887_9480075(MH63RS2), Chr11:9395532_9398720(ZS97RS2), Chr11:9476887_9480075(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr11: 7695497-7698684 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRI2, CIRCexplorer2, CIRI2 |
Parent gene | BGIOSGA034174 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA034174_circ_g.3 BGIOSGA034174_circ_g.4 BGIOSGA034174_circ_g.5 BGIOSGA034174_circ_g.7 BGIOSGA034174_circ_g.8 BGIOSGA034174_circ_g.9 BGIOSGA034174_circ_g.10 BGIOSGA034174_circ_g.11 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-No |
Splicing signals | CT-AA |
Number of exons covered | BGIOSGA034174-TA:5 |
Conservation Information | |
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Conserved circRNAs | osa_circ_009040 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |