Splice junction sequence |
TAGTTGCTTCATCTTCTTAGAGGACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCT ACCTCGACACCCTCCAGCTTATCGAAGGCTTTGTAGataaccagcgaagccaactatgactatt agttagtagcagcggttggggaagcagaatcactctcggtcagcgcttctcaattgtcaagccg tttgcacc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 157 Transcript exons: 3128930-3128991,3130768-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTGC TTCATCTTCTTAGAGGACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCTACCTCGA CACCCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 183 Transcript exons: 3128930-3129017,3130768-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCTTCATCTTCTTAGAGGACCCCATGACAGAGTCATCGAT CCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 187 Transcript exons: 3128930-3129018,3130765-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGGTTGCTTCATCTTCTTAGAGGACCCCATGACAGAGTCAT CGATCCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 223 Transcript exons: 3128930-3129088,3130799-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCCGTTTGCACCCTCAGAAACCACCTGACGGATGGCGACA CACGGTGTCCATTCAGGAATCAGGATGACCAGTCATCGATCCGGGATTGGCTCCATGCTACCTC GACACCCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 254 Transcript exons: 3128930-3129026,3130706-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCCGTTTGCAAACATTTTCTCAATGTTCTTATGCTTGAGT GTCTTCAAAAGTTGAATCTCTGTGTTTAGTTGCTTCATCTTCTTAGAGGACCCCATGACAGAGT CATCGATCCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 272 Transcript exons: 3128930-3129018,3130680-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGTTCTTCTCCCCATCAACCCATGAAGCAAACATTTTCTCA ATGTTCTTATGCTTGAGTGTCTTCAAAAGTTGAATCTCTGTGTTTAGTTGCTTCATCTTCTTAG AGGACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGCTT ATCGAAGGCTTTGTAG
Transcript length: 282 Transcript exons: 3128930-3129078,3130730-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCCGTTTGCACCCTCAGAAACCACCTGACGGATGGCGACA CACGGTGTCCATTCAGGAATCCTTGAGTGTCTTCAAAAGTTGAATCTCTGTGTTTAGTTGCTTC ATCTTCTTAGAGGACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCTACCTCGACAC CCTCCAGCTTATCGAAGGCTTTGTAG
Transcript length: 402 Transcript exons: 3128930-3129110,3130632-3130758,3130769-3130862 ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCCGTTTGCACCCTCAGAAACCACCTGACGGATGGCGACA CACGGTGTCCATTCAGGAATCAGGATGACCAAGAATGCATCGATCAACTGCGCTGTGTCAAGCT CCCGGATGTGAACAACTCTGTGATTATGTTAACAGTCTTCTTCTCCCCATCAACCCATGAAGCA AACATTTTCTCAATGTTCTTATGCTTGAGTGTCTTCAAAAGTTGAATCTCTGCTTCATCTTCTT AGAGGACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGC TTATCGAAGGCTTTGTAG
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Genomic sequence |
ATAACCAGCGAAGCCAACTATGACTATTAGTTAGTAGCAGCGGTTGGGGAAGCAGAATCACTCT CGGTCAGCGCTTCTCAATTGTCAAGCCGTTTGCACCCTCAGAAACCACCTGACGGATGGCGACA CACGGTGTCCATTCAGGAATCAGGATGACCAAGAATGCATCGATCAACTGCGCGATGATCGGTC TGCTGTCTTGTGTCAGTCCAAATTGCTCAACCATTTCCACAGCCACAGAAAGACTTGTATCTTC AGTCAAATTGAATGGGAATTCAACACTCTTGAAACAACCTGAAAGGAAGTTGATGTTCAGTACA AAACGTGTTGTTGAATTCTGGAAAAGAAAGATTTCAAACAATATGATTACCGCTGGGATCAGGA AATCTTAGCCATAAATCAACATGGCTGGCTACATCAACATTTCCTGTCAGCAGAAACTCGCCCT TACGAAGCATGCAACTGACAGGCTGCTGCCCATCTTCAGACATATTCTTGACCAGAGAGACTGA GATAAGATCATCATCCTGGAGGAAAGAGCTTTTCAACAGCTCTGTTGCAGACATTCTGTTCTCT ACTGGAGCTAAACAGTTCTCTATGAAAGATCTTACTTCTGCATCTTTAATTTTGTAGAACGCAG CTGGTTTCTTACCCTATATCAAATAGGTCATACAAACAAAAAGTTAAGTTGTTGGCTACTACAA TCACTCTGGTATCTGTAGACATCAAGACCTTACCTCATCAATCTTTTTGAATATATGGGCCATG CCTTGACATTCACTGTATGGGTATTCGCATGTCACCATTTCAAGCATGCACATCCCAAATGAAT ATATATCAACCAATTCATTGTAATGCCCAGTTAACAGCTCTGGTGCCATAAATTCTAAGGTGCC TGCAGTTAATGATTAATATATCCTTATTACACATCCAACTGAAAGAGAAATCCTTTTTAAGATG AAAAGAAAACAGAATTATATGAGTCAAGAAAATTGGTAACATAAGTTTAAAAGTGGACATACAT GCTAAATAGAATAGTTATGTTCTGAGAAAACTGTAACAGTTAGAAAACACATAAGATGGCAGAC ATATAACAATGTTGATATGAGATATCTACCTTTTATACTTTTTTTCTGTTGCTGCATGAATGTT GCCAAACCAAAATCACCAATCTTCACTTTCCCATGATTTCCATTTATGAATATATTGTCACATT TTAAATCCCTGTGTATAATTGCTGGCTTCTGACTGTGCAGATATTCTAGCCCTGTTAATATCTG TATTGCCCATCGTTTCATAGCCTTCATATTCACTTTCTTGTGCTTTCTGCGGTACCTGGTTACA TGGTGACATAAAAAAGGTTACATTGTAATTTATAAGGTAAAAGAAACGCAGTATCCCTCTTGAA GTTTTAGGGTAAATAATTTTAAGCAACGCTCATCTAGTCATCTATACTGAATTAAAGGGCGGTA CAAACAAATGACAATGAAAAGGAAAAGTTACCAAATATTATCCAAGAATTGTAAAGGAGCCAAC TAAAACTTTAATTTGCACAATGGAAAACTGTAAAAATGTTCAGGTAGCACTAATTCAGTAAAAA AAAGGTATATTTAGAAGATAGATATCCAAACCAATGAATAGGCAACAGTTTATTAATATGCTCC AGCTGACAGCATAGTTGTCGTAAGGATGAGGGGCATACTGTGTCAAGCTCCCGGATGTGAACAA CTCTGTGATTATGTTAACAGTCTTCTTCTCCCCATCAACCCATGAAGCAAACATTTTCTCAATG TTCTTATGCTTGAGTGTCTTCAAAAGTTGAATCTCTGTGTTTAGTTGCTTCATCTTCTTAGAGG ACCCCATGACAGAGTCATCGATCCGGGATTGGCTCCATGCTACCTCGACACCCTCCAGCTTATC GAAGGCTTTGTAG |