Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d036971_circ_g.2 |
ID in PlantcircBase | zma_circ_005214 |
Alias | seedlingd_test_circ_000888 |
Organism | Zea mays |
Position | chr6: 107850928-107851099 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d036971 |
Parent gene annotation |
ATP/GTP-binding protein family |
Parent gene strand | - |
Alternative splicing | Zm00001d036971_circ_g.1 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d036971_T047:1 Zm00001d036971_T005:1 Zm00001d036971_T045:1 Zm00001d036971_T032:1 Zm00001d036971_T025:1 Zm00001d036971_T027:1 Zm00001d036971_T011:1 Zm00001d036971_T035:1 Zm00001d036971_T029:1 Zm00001d036971_T012:1 Zm00001d036971_T041:1 Zm00001d036971_T019:1 Zm00001d036971_T004:1 Zm00001d036971_T022:1 Zm00001d036971_T033:1 Zm00001d036971_T034:1 Zm00001d036971_T008:1 Zm00001d036971_T048:1 Zm00001d036971_T042:1 Zm00001d036971_T001:1 Zm00001d036971_T040:1 Zm00001d036971_T016:1 Zm00001d036971_T003:1 Zm00001d036971_T015:1 Zm00001d036971_T023:1 Zm00001d036971_T010:1 Zm00001d036971_T044:1 Zm00001d036971_T031:1 Zm00001d036971_T037:1 Zm00001d036971_T021:1 Zm00001d036971_T024:1 Zm00001d036971_T017:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.423449128 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |