Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0522900_circ_g.2 |
ID in PlantcircBase | osa_circ_007733 |
Alias | Os_ciR6861 |
Organism | Oryza sativa |
Position | chr10: 20281909-20282365 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | Os10g0522900 |
Parent gene annotation |
Isopenicillin N synthase family protein. (Os10t0522900-01);Simil ar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed . (Os10t0522900-02) |
Parent gene strand | + |
Alternative splicing | Os10g0522900_circ_g.1 Os10g0522900_circ_igg.1 Os10g0522900_circ_g.2 Os10g0522900_circ_igg.3 Os10g0522900_circ_ag.1 Os10g0523100_circ_igg.1 Os10g0523100_circ_igg.2 |
Support reads | 2/1 |
Tissues | root/root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.219773742 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |